RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 TRIM50Q86XT4 487 aa8.08□□□□□ -1.12
SSB-208ENST00000468600 BHMTQ93088 406 aa8.08□□□□□ -1.12
SSB-208ENST00000468600 HSH2DQ96JZ2 352 aa8.08□□□□□ -1.12
SSB-208ENST00000468600 UBE2OQ9C0C9 1292 aaKnown RBP8.08□□□□□ -1.12
SSB-208ENST00000468600 KCNQ4P56696 695 aa8.07□□□□□ -1.12
SSB-208ENST00000468600 TYRO3Q06418 890 aa8.07□□□□□ -1.12
SSB-208ENST00000468600 MCM6Q14566 821 aa8.07□□□□□ -1.12
SSB-208ENST00000468600 C7orf43Q8WVR3 580 aa8.07□□□□□ -1.12
SSB-208ENST00000468600 SFI1A8K8P3 1242 aa8.06□□□□□ -1.12
SSB-208ENST00000468600 USP17L5A8MUK1 530 aa8.06□□□□□ -1.12
SSB-208ENST00000468600 WWC1Q8IX03 1113 aa8.06□□□□□ -1.12
SSB-208ENST00000468600 FMR1NBQ8N0W7 255 aaPredicted RBP8.06□□□□□ -1.12
SSB-208ENST00000468600 TPCN2Q8NHX9 752 aa8.06□□□□□ -1.12
SSB-208ENST00000468600 PHACTR1Q9C0D0 580 aa8.06□□□□□ -1.12
SSB-208ENST00000468600 JPH1Q9HDC5 661 aaPredicted RBP8.06□□□□□ -1.12
SSB-208ENST00000468600 USP21Q9UK80 565 aa8.06□□□□□ -1.12
SSB-208ENST00000468600 ATP1A2P50993 1020 aa8.05□□□□□ -1.12
SSB-208ENST00000468600 CD97P48960 835 aa8.04□□□□□ -1.12
SSB-208ENST00000468600 IRAK1P51617 712 aa8.04□□□□□ -1.12
SSB-208ENST00000468600 HIRAP54198 1017 aaPredicted RBP8.04□□□□□ -1.12
SSB-208ENST00000468600 HIF1AQ16665 826 aa8.04□□□□□ -1.12
SSB-208ENST00000468600 DEPDC4Q8N2C3 294 aa8.04□□□□□ -1.12
SSB-208ENST00000468600 TSPAN10Q9H1Z9 355 aaPredicted RBP8.04□□□□□ -1.12
SSB-208ENST00000468600 IGFLR1Q9H665 355 aa8.04□□□□□ -1.12
SSB-208ENST00000468600 SLC6A14Q9UN76 642 aa8.04□□□□□ -1.12
SSB-208ENST00000468600 HCN4Q9Y3Q4 1203 aa8.04□□□□□ -1.12
SSB-208ENST00000468600 TAL1P17542 331 aaPredicted RBP8.03□□□□□ -1.12
SSB-208ENST00000468600 SSTR4P31391 388 aa8.03□□□□□ -1.12
SSB-208ENST00000468600 NUDT8Q8WV74 236 aa8.03□□□□□ -1.12
SSB-208ENST00000468600 SUSD3Q96L08 255 aa8.03□□□□□ -1.12
SSB-208ENST00000468600 EFCC1Q9HA90 598 aa8.03□□□□□ -1.12
SSB-208ENST00000468600 CCDC102BQ68D86 513 aa8.02□□□□□ -1.13
SSB-208ENST00000468600 WFDC12Q8WWY7 111 aa8.02□□□□□ -1.13
SSB-208ENST00000468600 MEGF10Q96KG7 1140 aa8.02□□□□□ -1.13
SSB-208ENST00000468600 ALG2Q9H553 416 aa8.02□□□□□ -1.13
SSB-208ENST00000468600 OAS3Q9Y6K5 1087 aaKnown RBP8.02□□□□□ -1.13
SSB-208ENST00000468600 NOS3P29474 1203 aa8.01□□□□□ -1.13
SSB-208ENST00000468600 PSAPL1Q6NUJ1 521 aa8.01□□□□□ -1.13
SSB-208ENST00000468600 PRR23CQ6ZRP0 262 aa8.01□□□□□ -1.13
SSB-208ENST00000468600 ZNF280CQ8ND82 737 aa8.01□□□□□ -1.13
SSB-208ENST00000468600 PNMA5Q96PV4 448 aa8.01□□□□□ -1.13
SSB-208ENST00000468600 RNF114Q9Y508 228 aa8.01□□□□□ -1.13
SSB-208ENST00000468600 PPP1R12BO60237 982 aaPredicted RBP8□□□□□ -1.13
SSB-208ENST00000468600 RGS9O75916 674 aaPredicted RBP8□□□□□ -1.13
SSB-208ENST00000468600 IREB2P48200 963 aaKnown RBP8□□□□□ -1.13
SSB-208ENST00000468600 AFF1P51825 1210 aaKnown RBP8□□□□□ -1.13
SSB-208ENST00000468600 POTEAQ6S8J7 498 aa8□□□□□ -1.13
SSB-208ENST00000468600 DNAJB12Q9NXW2 375 aaKnown RBP8□□□□□ -1.13
SSB-208ENST00000468600 KIAA1024Q9UPX6 916 aa8□□□□□ -1.13
SSB-208ENST00000468600 COG6Q9Y2V7 657 aa8□□□□□ -1.13
SSB-208ENST00000468600 RBM19Q9Y4C8 960 aaKnown RBP8□□□□□ -1.13
SSB-208ENST00000468600 M0R2N6 131 aa7.99□□□□□ -1.13
SSB-208ENST00000468600 BTLAQ7Z6A9 289 aa7.99□□□□□ -1.13
SSB-208ENST00000468600 DMRTC2Q8IXT2 367 aaPredicted RBP7.99□□□□□ -1.13
SSB-208ENST00000468600 USP17L3A6NCW0 530 aa7.98□□□□□ -1.13
SSB-208ENST00000468600 USP17L4A6NCW7 530 aa7.98□□□□□ -1.13
SSB-208ENST00000468600 MED26O95402 600 aa7.98□□□□□ -1.13
SSB-208ENST00000468600 FSTP19883 344 aa7.98□□□□□ -1.13
SSB-208ENST00000468600 USP17L2Q6R6M4 530 aa7.98□□□□□ -1.13
SSB-208ENST00000468600 USP17L1Q7RTZ2 530 aa7.98□□□□□ -1.13
SSB-208ENST00000468600 PLEKHM2Q8IWE5 1019 aa7.98□□□□□ -1.13
SSB-208ENST00000468600 NAGPAQ9UK23 515 aa7.98□□□□□ -1.13
SSB-208ENST00000468600 ALDH16A1Q8IZ83 802 aa7.97□□□□□ -1.13
SSB-208ENST00000468600 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.97□□□□□ -1.13
SSB-208ENST00000468600 PALM3A6NDB9 673 aaPredicted RBP7.96□□□□□ -1.14
SSB-208ENST00000468600 ZBTB7BO15156 539 aaPredicted RBP7.96□□□□□ -1.14
SSB-208ENST00000468600 CLDN10P78369 228 aa7.96□□□□□ -1.14
SSB-208ENST00000468600 PCSK7Q16549 785 aa7.96□□□□□ -1.14
SSB-208ENST00000468600 LARGE2Q8N3Y3 721 aa7.96□□□□□ -1.14
SSB-208ENST00000468600 OGFOD1Q8N543 542 aa7.96□□□□□ -1.14
SSB-208ENST00000468600 DTWD1Q8N5C7 304 aa7.96□□□□□ -1.14
SSB-208ENST00000468600 KIAA1324LA8MWY0 1029 aaPredicted RBP7.95□□□□□ -1.14
SSB-208ENST00000468600 PRKCSHP14314 528 aaPredicted RBP7.95□□□□□ -1.14
SSB-208ENST00000468600 NFKB1P19838 968 aa7.95□□□□□ -1.14
SSB-208ENST00000468600 GP2P55259 537 aaKnown RBP7.95□□□□□ -1.14
SSB-208ENST00000468600 CCINQ13939 588 aa7.95□□□□□ -1.14
SSB-208ENST00000468600 IER5Q5VY09 327 aa7.95□□□□□ -1.14
SSB-208ENST00000468600 TSEN2Q8NCE0 465 aaKnown RBP7.95□□□□□ -1.14
SSB-208ENST00000468600 EPB42P16452 691 aa7.94□□□□□ -1.14
SSB-208ENST00000468600 MSL1Q68DK7 614 aa7.94□□□□□ -1.14
SSB-208ENST00000468600 SLC51AQ86UW1 340 aa7.94□□□□□ -1.14
SSB-208ENST00000468600 FAM35AQ86V20 835 aa7.94□□□□□ -1.14
SSB-208ENST00000468600 FBXO11Q86XK2 927 aa7.94□□□□□ -1.14
SSB-208ENST00000468600 STAG2Q8N3U4 1231 aa7.94□□□□□ -1.14
SSB-208ENST00000468600 NGLY1Q96IV0 654 aa7.94□□□□□ -1.14
SSB-208ENST00000468600 GSX2Q9BZM3 304 aa7.94□□□□□ -1.14
SSB-208ENST00000468600 RAD21O60216 631 aa7.93□□□□□ -1.14
SSB-208ENST00000468600 JAG1P78504 1218 aa7.93□□□□□ -1.14
SSB-208ENST00000468600 SIX5Q8N196 739 aa7.93□□□□□ -1.14
SSB-208ENST00000468600 GAS2L2Q8NHY3 880 aa7.93□□□□□ -1.14
SSB-208ENST00000468600 ZNF594Q96JF6 807 aaPredicted RBP7.93□□□□□ -1.14
SSB-208ENST00000468600 ATAD2Q6PL18 1390 aa7.93□□□□□ -1.14
SSB-208ENST00000468600 TGFBR3LH3BV60 316 aa7.92□□□□□ -1.14
SSB-208ENST00000468600 ADAMTS4O75173 837 aa7.92□□□□□ -1.14
SSB-208ENST00000468600 CPB1P15086 417 aa7.92□□□□□ -1.14
SSB-208ENST00000468600 FLIIQ13045 1269 aa7.92□□□□□ -1.14
SSB-208ENST00000468600 WFDC8Q8IUA0 241 aa7.92□□□□□ -1.14
SSB-208ENST00000468600 DZIP1LQ8IYY4 767 aaKnown RBP7.92□□□□□ -1.14
SSB-208ENST00000468600 CHMP7Q8WUX9 453 aaPredicted RBP7.92□□□□□ -1.14
SSB-208ENST00000468600 C2orf49Q9BVC5 232 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms