RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 TEAD4Q15561 434 aa5.08□□□□□ -1.6
CDHR3-206ENST00000468477 LARP1Q6PKG0 1096 aaKnown RBP5.08□□□□□ -1.6
CDHR3-206ENST00000468477 ALYREFQ86V81 257 aaKnown RBP5.08□□□□□ -1.6
CDHR3-206ENST00000468477 OGFOD1Q8N543 542 aa5.08□□□□□ -1.6
CDHR3-206ENST00000468477 L3MBTL2Q969R5 705 aa5.08□□□□□ -1.6
CDHR3-206ENST00000468477 PLCD4Q9BRC7 762 aa5.08□□□□□ -1.6
CDHR3-206ENST00000468477 ANKIB1Q9P2G1 1089 aa5.08□□□□□ -1.6
CDHR3-206ENST00000468477 MKRN1Q9UHC7 482 aaKnown RBP5.08□□□□□ -1.6
CDHR3-206ENST00000468477 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.08□□□□□ -1.6
CDHR3-206ENST00000468477 SBNO2Q9Y2G9 1366 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 VAMP1P23763 118 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 ADH6P28332 368 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 GSK3AP49840 483 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 ANAPC15P60006 121 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 PSMA6P60900 246 aaKnown RBP5.07□□□□□ -1.6
CDHR3-206ENST00000468477 LAMC2Q13753 1193 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 HIF1AQ16665 826 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 FAM182BQ5T319 152 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 SLCO4C1Q6ZQN7 724 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 NOP9Q86U38 636 aaKnown RBP5.07□□□□□ -1.6
CDHR3-206ENST00000468477 SLC9A9Q8IVB4 645 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 PKNOX2Q96KN3 472 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 AVENQ9NQS1 362 aaPredicted RBP5.07□□□□□ -1.6
CDHR3-206ENST00000468477 IQSEC3Q9UPP2 1182 aaPredicted RBP5.07□□□□□ -1.6
CDHR3-206ENST00000468477 TMA7Q9Y2S6 64 aaKnown RBP5.07□□□□□ -1.6
CDHR3-206ENST00000468477 PARP3Q9Y6F1 533 aa5.07□□□□□ -1.6
CDHR3-206ENST00000468477 CNTNAP5Q8WYK1 1306 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 M0R2N6 131 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 MAFGO15525 162 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 THBS1P07996 1170 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 FAM157BP0CG42 384 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 MAPTP10636 758 aaKnown RBP5.06□□□□□ -1.6
CDHR3-206ENST00000468477 RASA1P20936 1047 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 ALAS2P22557 587 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 ERCC5P28715 1186 aaPredicted RBP5.06□□□□□ -1.6
CDHR3-206ENST00000468477 UBAP2LQ14157 1087 aaKnown RBP5.06□□□□□ -1.6
CDHR3-206ENST00000468477 SAMD5Q5TGI4 173 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 GPAT2Q6NUI2 795 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 RHPN1Q8TCX5 695 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 ZIC5Q96T25 663 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 METTL14Q9HCE5 456 aaKnown RBP5.06□□□□□ -1.6
CDHR3-206ENST00000468477 NDFIP2Q9NV92 336 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 MARK1Q9P0L2 795 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 GGA1Q9UJY5 639 aa5.06□□□□□ -1.6
CDHR3-206ENST00000468477 ANKRD33BA6NCL7 494 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 SEC13P55735 322 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 IGBP1P78318 339 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 CTBSQ01459 385 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 TNP2Q05952 138 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 CCDC181Q5TID7 509 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 TNS4Q8IZW8 715 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 SIX5Q8N196 739 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 GAS2L2Q8NHY3 880 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 MORC4Q8TE76 937 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 VTI1AQ96AJ9 217 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 ZNF594Q96JF6 807 aaPredicted RBP5.05□□□□□ -1.6
CDHR3-206ENST00000468477 NAP1L5Q96NT1 182 aaPredicted RBP5.05□□□□□ -1.6
CDHR3-206ENST00000468477 DNAJC2Q99543 621 aaKnown RBP5.05□□□□□ -1.6
CDHR3-206ENST00000468477 PRDM10Q9NQV6 1147 aa5.05□□□□□ -1.6
CDHR3-206ENST00000468477 NOP53Q9NZM5 478 aaKnown RBP5.05□□□□□ -1.6
CDHR3-206ENST00000468477 TFIP11Q9UBB9 837 aaKnown RBP5.05□□□□□ -1.6
CDHR3-206ENST00000468477 TLDC2A0PJX2 215 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 NEURL1BA8MQ27 555 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 PPP1R12BO60237 982 aaPredicted RBP5.04□□□□□ -1.6
CDHR3-206ENST00000468477 PEX14O75381 377 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 MAP4K4O95819 1239 aaPredicted RBP5.04□□□□□ -1.6
CDHR3-206ENST00000468477 CD33P20138 364 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 PTMSP20962 102 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 CLDN10P78369 228 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 FAM50AQ14320 339 aaKnown RBP5.04□□□□□ -1.6
CDHR3-206ENST00000468477 C1orf53Q5VUE5 145 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 LRRC69Q6ZNQ3 347 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 GPATCH3Q96I76 525 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 HINFPQ9BQA5 517 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 LNPKQ9C0E8 428 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 KLHL42Q9P2K6 505 aa5.04□□□□□ -1.6
CDHR3-206ENST00000468477 hCG_2014768A0A024R1R8 64 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 SPDYE3A6NKU9 549 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 EML1O00423 815 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 GNB5O14775 395 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 ZBTB7BO15156 539 aaPredicted RBP5.03□□□□□ -1.6
CDHR3-206ENST00000468477 RECKO95980 971 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 EPXP11678 715 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 ARID4AP29374 1257 aaPredicted RBP5.03□□□□□ -1.6
CDHR3-206ENST00000468477 TXLNAP40222 546 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 TSNAXIP1Q2TAA8 658 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 TBCELQ5QJ74 424 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 SPTY2D1Q68D10 685 aaPredicted RBP5.03□□□□□ -1.6
CDHR3-206ENST00000468477 NPAS4Q8IUM7 802 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 UCN2Q96RP3 112 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 TANGO6Q9C0B7 1094 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 TSPAN10Q9H1Z9 355 aaPredicted RBP5.03□□□□□ -1.6
CDHR3-206ENST00000468477 BIN2Q9UBW5 565 aaPredicted RBP5.03□□□□□ -1.6
CDHR3-206ENST00000468477 MAFBQ9Y5Q3 323 aaPredicted RBP5.03□□□□□ -1.6
CDHR3-206ENST00000468477 USP3Q9Y6I4 520 aa5.03□□□□□ -1.6
CDHR3-206ENST00000468477 SOWAHDA6NJG2 315 aa5.02□□□□□ -1.61
CDHR3-206ENST00000468477 SHISA8B8ZZ34 492 aa5.02□□□□□ -1.61
CDHR3-206ENST00000468477 C2CD2LO14523 706 aa5.02□□□□□ -1.61
CDHR3-206ENST00000468477 MSTNO14793 375 aa5.02□□□□□ -1.61
CDHR3-206ENST00000468477 ZEB1P37275 1124 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms