RNA–Protein interactions for RNA: ENST00000468288.5

PICK1-210, Transcript of protein interacting with PRKCA 1, human

TSL 4

Gene PICK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICK1-210	ENST00000468288	TWISTNB	Q3B726	338 aa	Predicted RBP	19.04	■□□□□ 0.64
PICK1-210	ENST00000468288	SYNE4	Q8N205	404 aa		19.04	■□□□□ 0.64
PICK1-210	ENST00000468288	IBTK	Q9P2D0	1353 aa	Predicted RBP	19.04	■□□□□ 0.64
PICK1-210	ENST00000468288	SLX4	Q8IY92	1834 aa		19.03	■□□□□ 0.64
PICK1-210	ENST00000468288	C3orf67	Q6ZVT6	689 aa		19.03	■□□□□ 0.64
PICK1-210	ENST00000468288	ATP5J2-PTCD1	G3V325	749 aa		19.02	■□□□□ 0.64
PICK1-210	ENST00000468288	NFKBIE	O00221	500 aa		19.02	■□□□□ 0.64
PICK1-210	ENST00000468288	CRY2	Q49AN0	593 aa		19.02	■□□□□ 0.64
PICK1-210	ENST00000468288	RNF181	Q9P0P0	153 aa		19.02	■□□□□ 0.64
PICK1-210	ENST00000468288	TNRC6C	Q9HCJ0	1690 aa	Known RBP	19.01	■□□□□ 0.63
PICK1-210	ENST00000468288	EXOSC9	Q06265	439 aa	Known RBP	19.01	■□□□□ 0.63
PICK1-210	ENST00000468288	SLC10A5	Q5PT55	438 aa		19.01	■□□□□ 0.63
PICK1-210	ENST00000468288	RIC3	Q7Z5B4	369 aa		19.01	■□□□□ 0.63
PICK1-210	ENST00000468288	C7orf43	Q8WVR3	580 aa		19.01	■□□□□ 0.63
PICK1-210	ENST00000468288	ISCA1	Q9BUE6	129 aa		19.01	■□□□□ 0.63
PICK1-210	ENST00000468288	TRMT112	Q9UI30	125 aa	Known RBP	19.01	■□□□□ 0.63
PICK1-210	ENST00000468288	GOLGA2	Q08379	1002 aa		19	■□□□□ 0.63
PICK1-210	ENST00000468288	OLFM4	Q6UX06	510 aa		19	■□□□□ 0.63
PICK1-210	ENST00000468288	CHMP4A	Q9BY43	222 aa		19	■□□□□ 0.63
PICK1-210	ENST00000468288	GPBP1L1	Q9HC44	474 aa	Predicted RBP	19	■□□□□ 0.63
PICK1-210	ENST00000468288	VAMP4	O75379	141 aa		18.99	■□□□□ 0.63
PICK1-210	ENST00000468288	HCLS1	P14317	486 aa	Predicted RBP	18.99	■□□□□ 0.63
PICK1-210	ENST00000468288	ALDH1B1	P30837	517 aa		18.99	■□□□□ 0.63
PICK1-210	ENST00000468288	G2E3	Q7L622	706 aa		18.99	■□□□□ 0.63
PICK1-210	ENST00000468288	NLRP3	Q96P20	1036 aa		18.99	■□□□□ 0.63
PICK1-210	ENST00000468288	SBF1	O95248	1867 aa		18.99	■□□□□ 0.63
PICK1-210	ENST00000468288	CACNA1S	Q13698	1873 aa		18.99	■□□□□ 0.63
PICK1-210	ENST00000468288	LMNB1	P20700	586 aa		18.98	■□□□□ 0.63
PICK1-210	ENST00000468288	RPGR	Q92834	1020 aa	Known RBP	18.98	■□□□□ 0.63
PICK1-210	ENST00000468288	MYD88	Q99836	296 aa		18.98	■□□□□ 0.63
PICK1-210	ENST00000468288	STK31	Q9BXU1	1019 aa		18.98	■□□□□ 0.63
PICK1-210	ENST00000468288	ANKRD36C	Q5JPF3	1778 aa		18.98	■□□□□ 0.63
PICK1-210	ENST00000468288	RIC1	Q4ADV7	1423 aa		18.98	■□□□□ 0.63
PICK1-210	ENST00000468288	ZNF521	Q96K83	1311 aa		18.98	■□□□□ 0.63
PICK1-210	ENST00000468288	SLC4A2	P04920	1241 aa		18.97	■□□□□ 0.63
PICK1-210	ENST00000468288	HOXA10	P31260	410 aa	Predicted RBP	18.97	■□□□□ 0.63
PICK1-210	ENST00000468288	FAM89A	Q96GI7	184 aa		18.97	■□□□□ 0.63
PICK1-210	ENST00000468288	SH3TC1	Q8TE82	1336 aa		18.97	■□□□□ 0.63
PICK1-210	ENST00000468288	TRIM28	Q13263	835 aa	Known RBP	18.96	■□□□□ 0.63
PICK1-210	ENST00000468288	RTL5	Q5HYW3	569 aa	Predicted RBP	18.96	■□□□□ 0.63
PICK1-210	ENST00000468288	SLC51A	Q86UW1	340 aa		18.96	■□□□□ 0.63
PICK1-210	ENST00000468288	RBM17	Q96I25	401 aa	Known RBP	18.96	■□□□□ 0.63
PICK1-210	ENST00000468288	MYH16	Q9H6N6	1097 aa		18.96	■□□□□ 0.63
PICK1-210	ENST00000468288	RNF123	Q5XPI4	1314 aa		18.96	■□□□□ 0.63
PICK1-210	ENST00000468288	DDX58	O95786	925 aa	Known RBP	18.95	■□□□□ 0.62
PICK1-210	ENST00000468288	CCDC93	Q567U6	631 aa		18.95	■□□□□ 0.62
PICK1-210	ENST00000468288	SOGA3	Q5TF21	947 aa		18.95	■□□□□ 0.62
PICK1-210	ENST00000468288	CRAMP1	Q96RY5	1269 aa		18.95	■□□□□ 0.62
PICK1-210	ENST00000468288	METTL22	Q9BUU2	404 aa	Predicted RBP	18.95	■□□□□ 0.62
PICK1-210	ENST00000468288	TAOK3	Q9H2K8	898 aa		18.95	■□□□□ 0.62
PICK1-210	ENST00000468288	MAP3K2	Q9Y2U5	619 aa		18.95	■□□□□ 0.62
PICK1-210	ENST00000468288	ARFGEF2	Q9Y6D5	1785 aa		18.94	■□□□□ 0.62
PICK1-210	ENST00000468288	PI4KAP2	A4QPH2	592 aa		18.94	■□□□□ 0.62
PICK1-210	ENST00000468288	KSR2	Q6VAB6	950 aa		18.94	■□□□□ 0.62
PICK1-210	ENST00000468288	PI4KAP1	Q8N8J0	262 aa		18.94	■□□□□ 0.62
PICK1-210	ENST00000468288	FER1L6	Q2WGJ9	1857 aa		18.94	■□□□□ 0.62
PICK1-210	ENST00000468288	JARID2	Q92833	1246 aa	Predicted RBP	18.93	■□□□□ 0.62
PICK1-210	ENST00000468288	LTBP3	Q9NS15	1303 aa		18.93	■□□□□ 0.62
PICK1-210	ENST00000468288	CCDC88A	Q3V6T2	1871 aa		18.92	■□□□□ 0.62
PICK1-210	ENST00000468288	KIF3C	O14782	793 aa		18.92	■□□□□ 0.62
PICK1-210	ENST00000468288	C1QTNF8	P60827	252 aa		18.92	■□□□□ 0.62
PICK1-210	ENST00000468288	NMRK2	Q9NPI5	230 aa		18.92	■□□□□ 0.62
PICK1-210	ENST00000468288	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
PICK1-210	ENST00000468288	FLII	Q13045	1269 aa		18.91	■□□□□ 0.62
PICK1-210	ENST00000468288	RTKN2	Q8IZC4	609 aa		18.91	■□□□□ 0.62
PICK1-210	ENST00000468288	CCDC191	Q8NCU4	936 aa		18.91	■□□□□ 0.62
PICK1-210	ENST00000468288	ABCC4	O15439	1325 aa		18.91	■□□□□ 0.62
PICK1-210	ENST00000468288	IRS4	O14654	1257 aa	Predicted RBP	18.9	■□□□□ 0.62
PICK1-210	ENST00000468288	PPEF1	O14829	653 aa	Predicted RBP	18.9	■□□□□ 0.62
PICK1-210	ENST00000468288	IGKV5-2	P06315	115 aa		18.9	■□□□□ 0.62
PICK1-210	ENST00000468288	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.9	■□□□□ 0.62
PICK1-210	ENST00000468288	ZNF277	Q9NRM2	450 aa	Predicted RBP	18.9	■□□□□ 0.62
PICK1-210	ENST00000468288	CWC25	Q9NXE8	425 aa	Predicted RBP	18.9	■□□□□ 0.62
PICK1-210	ENST00000468288	DDX46	Q7L014	1031 aa	Known RBP	18.89	■□□□□ 0.61
PICK1-210	ENST00000468288	CDCA7L	Q96GN5	454 aa		18.89	■□□□□ 0.61
PICK1-210	ENST00000468288	YTHDC1	Q96MU7	727 aa	Known RBP	18.89	■□□□□ 0.61
PICK1-210	ENST00000468288	SLFN5	Q08AF3	891 aa		18.88	■□□□□ 0.61
PICK1-210	ENST00000468288	FKBP5	Q13451	457 aa	Predicted RBP	18.88	■□□□□ 0.61
PICK1-210	ENST00000468288	SF3B3	Q15393	1217 aa	Known RBP	18.88	■□□□□ 0.61
PICK1-210	ENST00000468288	CWF19L2	Q2TBE0	894 aa	Known RBP	18.88	■□□□□ 0.61
PICK1-210	ENST00000468288	CC2D2B	Q6DHV5	1058 aa		18.88	■□□□□ 0.61
PICK1-210	ENST00000468288	RRAGC	Q9HB90	399 aa		18.88	■□□□□ 0.61
PICK1-210	ENST00000468288	ZC3H4	Q9UPT8	1303 aa	Known RBP	18.88	■□□□□ 0.61
PICK1-210	ENST00000468288	SNED1	Q8TER0	1413 aa		18.88	■□□□□ 0.61
PICK1-210	ENST00000468288	LAMB2	P55268	1798 aa		18.88	■□□□□ 0.61
PICK1-210	ENST00000468288	GLTPD2	A6NH11	291 aa		18.87	■□□□□ 0.61
PICK1-210	ENST00000468288		E9PSI1	815 aa		18.87	■□□□□ 0.61
PICK1-210	ENST00000468288	PCCA	P05165	728 aa	Predicted RBP	18.87	■□□□□ 0.61
PICK1-210	ENST00000468288	KDM2B	Q8NHM5	1336 aa		18.87	■□□□□ 0.61
PICK1-210	ENST00000468288	ATP6V0A2	Q9Y487	856 aa		18.87	■□□□□ 0.61
PICK1-210	ENST00000468288	DDX60	Q8IY21	1712 aa	Known RBP	18.86	■□□□□ 0.61
PICK1-210	ENST00000468288	BBOX1	O75936	387 aa		18.86	■□□□□ 0.61
PICK1-210	ENST00000468288	NEXN	Q0ZGT2	675 aa		18.86	■□□□□ 0.61
PICK1-210	ENST00000468288	GRAP	Q13588	217 aa		18.86	■□□□□ 0.61
PICK1-210	ENST00000468288	GRAPL	Q8TC17	118 aa	Predicted RBP	18.86	■□□□□ 0.61
PICK1-210	ENST00000468288	PSMD1	Q99460	953 aa		18.86	■□□□□ 0.61
PICK1-210	ENST00000468288	NEURL1B	A8MQ27	555 aa		18.85	■□□□□ 0.61
PICK1-210	ENST00000468288	IARS	P41252	1262 aa	Known RBP	18.85	■□□□□ 0.61
PICK1-210	ENST00000468288	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
PICK1-210	ENST00000468288	DNAAF4	Q8WXU2	420 aa		18.85	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms