RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 MASTLQ96GX5 879 aa25.61■■□□□ 1.69
NPHP4-206ENST00000468253 AFDNP55196 1824 aaKnown RBP25.6■■□□□ 1.69
NPHP4-206ENST00000468253 CNKSR1Q969H4 720 aa25.6■■□□□ 1.69
NPHP4-206ENST00000468253 TRMT112Q9UI30 125 aaKnown RBP25.6■■□□□ 1.69
NPHP4-206ENST00000468253 MAP3K2Q9Y2U5 619 aa25.6■■□□□ 1.69
NPHP4-206ENST00000468253 NUP98P52948 1817 aa25.6■■□□□ 1.69
NPHP4-206ENST00000468253 ATP5J2-PTCD1G3V325 749 aa25.59■■□□□ 1.69
NPHP4-206ENST00000468253 NPR1P16066 1061 aa25.59■■□□□ 1.69
NPHP4-206ENST00000468253 CRY2Q49AN0 593 aa25.59■■□□□ 1.69
NPHP4-206ENST00000468253 ZNF622Q969S3 477 aaKnown RBP eCLIP25.59■■□□□ 1.69
NPHP4-206ENST00000468253 ALDH1L2Q3SY69 923 aa25.58■■□□□ 1.69
NPHP4-206ENST00000468253 NLRP3Q96P20 1036 aa25.58■■□□□ 1.69
NPHP4-206ENST00000468253 SH3TC1Q8TE82 1336 aa25.58■■□□□ 1.69
NPHP4-206ENST00000468253 RIC1Q4ADV7 1423 aa25.57■■□□□ 1.68
NPHP4-206ENST00000468253 GOLGB1Q14789 3259 aaKnown RBP25.57■■□□□ 1.68
NPHP4-206ENST00000468253 NEXNQ0ZGT2 675 aa25.57■■□□□ 1.68
NPHP4-206ENST00000468253 FKBP5Q13451 457 aaPredicted RBP25.57■■□□□ 1.68
NPHP4-206ENST00000468253 MYD88Q99836 296 aa25.57■■□□□ 1.68
NPHP4-206ENST00000468253 ALDH1B1P30837 517 aa25.56■■□□□ 1.68
NPHP4-206ENST00000468253 HOXA10P31260 410 aaPredicted RBP25.56■■□□□ 1.68
NPHP4-206ENST00000468253 ADCY9O60503 1353 aa25.56■■□□□ 1.68
NPHP4-206ENST00000468253 HSP90B1P14625 803 aaKnown RBP25.55■■□□□ 1.68
NPHP4-206ENST00000468253 MRPL50Q8N5N7 158 aaKnown RBP25.55■■□□□ 1.68
NPHP4-206ENST00000468253 ZBTB38Q8NAP3 1195 aaPredicted RBP25.55■■□□□ 1.68
NPHP4-206ENST00000468253 CWC25Q9NXE8 425 aaPredicted RBP25.55■■□□□ 1.68
NPHP4-206ENST00000468253 WWC3Q9ULE0 1092 aa25.55■■□□□ 1.68
NPHP4-206ENST00000468253 UTRNP46939 3433 aa25.55■■□□□ 1.68
NPHP4-206ENST00000468253 ZBED9Q6R2W3 1325 aa25.55■■□□□ 1.68
NPHP4-206ENST00000468253 DNAAF4Q8WXU2 420 aa25.54■■□□□ 1.68
NPHP4-206ENST00000468253 SSH1Q8WYL5 1049 aa25.54■■□□□ 1.68
NPHP4-206ENST00000468253 KIAA1551Q9HCM1 1747 aa25.54■■□□□ 1.68
NPHP4-206ENST00000468253 IGKV5-2P06315 115 aa25.53■■□□□ 1.68
NPHP4-206ENST00000468253 ABCC12Q96J65 1359 aa25.53■■□□□ 1.68
NPHP4-206ENST00000468253 BRPF1P55201 1214 aaPredicted RBP25.52■■□□□ 1.68
NPHP4-206ENST00000468253 FAM89AQ96GI7 184 aa25.52■■□□□ 1.68
NPHP4-206ENST00000468253 PCCAP05165 728 aaPredicted RBP25.51■■□□□ 1.67
NPHP4-206ENST00000468253 ARHGAP27Q6ZUM4 889 aa25.51■■□□□ 1.67
NPHP4-206ENST00000468253 SYNE4Q8N205 404 aa25.51■■□□□ 1.67
NPHP4-206ENST00000468253 LINS1Q8NG48 757 aa25.51■■□□□ 1.67
NPHP4-206ENST00000468253 CRAMP1Q96RY5 1269 aa25.51■■□□□ 1.67
NPHP4-206ENST00000468253 NEURL1BA8MQ27 555 aa25.5■■□□□ 1.67
NPHP4-206ENST00000468253 HCLS1P14317 486 aaPredicted RBP25.5■■□□□ 1.67
NPHP4-206ENST00000468253 N4BP2Q86UW6 1770 aaPredicted RBP25.5■■□□□ 1.67
NPHP4-206ENST00000468253 RBM17Q96I25 401 aaKnown RBP25.5■■□□□ 1.67
NPHP4-206ENST00000468253 CACNA1FO60840 1977 aa25.49■■□□□ 1.67
NPHP4-206ENST00000468253 PTPRCP08575 1304 aa25.49■■□□□ 1.67
NPHP4-206ENST00000468253 SOGA3Q5TF21 947 aa25.49■■□□□ 1.67
NPHP4-206ENST00000468253 C7orf43Q8WVR3 580 aa25.49■■□□□ 1.67
NPHP4-206ENST00000468253 RPGRQ92834 1020 aaKnown RBP25.49■■□□□ 1.67
NPHP4-206ENST00000468253 IRS4O14654 1257 aaPredicted RBP25.48■■□□□ 1.67
NPHP4-206ENST00000468253 SF3B3Q15393 1217 aaKnown RBP25.48■■□□□ 1.67
NPHP4-206ENST00000468253 PRPF40BQ6NWY9 871 aaKnown RBP25.48■■□□□ 1.67
NPHP4-206ENST00000468253 H7C1W4 665 aa25.47■■□□□ 1.67
NPHP4-206ENST00000468253 BEND3Q5T5X7 828 aa25.47■■□□□ 1.67
NPHP4-206ENST00000468253 C3orf67Q6ZVT6 689 aa25.47■■□□□ 1.67
NPHP4-206ENST00000468253 ANKRD31Q8N7Z5 1873 aa25.47■■□□□ 1.67
NPHP4-206ENST00000468253 RARSP54136 660 aaKnown RBP25.46■■□□□ 1.67
NPHP4-206ENST00000468253 GCKRQ14397 625 aa25.46■■□□□ 1.67
NPHP4-206ENST00000468253 F6X3S4 739 aa25.45■■□□□ 1.66
NPHP4-206ENST00000468253 C21orf2O43822 256 aa25.45■■□□□ 1.66
NPHP4-206ENST00000468253 BBOX1O75936 387 aa25.45■■□□□ 1.66
NPHP4-206ENST00000468253 YY1P25490 414 aa25.45■■□□□ 1.66
NPHP4-206ENST00000468253 CWF19L2Q2TBE0 894 aaKnown RBP25.45■■□□□ 1.66
NPHP4-206ENST00000468253 SMC4Q9NTJ3 1288 aa25.45■■□□□ 1.66
NPHP4-206ENST00000468253 CDHR2Q9BYE9 1310 aa25.44■■□□□ 1.66
NPHP4-206ENST00000468253 CC2D2BQ6DHV5 1058 aa25.44■■□□□ 1.66
NPHP4-206ENST00000468253 PDE8AO60658 829 aa25.43■■□□□ 1.66
NPHP4-206ENST00000468253 ALDH1L1O75891 902 aa25.43■■□□□ 1.66
NPHP4-206ENST00000468253 GRIPAP1Q4V328 841 aa25.43■■□□□ 1.66
NPHP4-206ENST00000468253 DDX46Q7L014 1031 aaKnown RBP25.43■■□□□ 1.66
NPHP4-206ENST00000468253 BRCA1P38398 1863 aaKnown RBP25.43■■□□□ 1.66
NPHP4-206ENST00000468253 RTL5Q5HYW3 569 aaPredicted RBP25.42■■□□□ 1.66
NPHP4-206ENST00000468253 ANKRD36CQ5JPF3 1778 aa25.41■■□□□ 1.66
NPHP4-206ENST00000468253 RTKN2Q8IZC4 609 aa25.41■■□□□ 1.66
NPHP4-206ENST00000468253 ARHGAP45Q92619 1136 aa25.41■■□□□ 1.66
NPHP4-206ENST00000468253 ARFGEF2Q9Y6D5 1785 aa25.41■■□□□ 1.66
NPHP4-206ENST00000468253 PLA2G12BQ9BX93 195 aa25.4■■□□□ 1.66
NPHP4-206ENST00000468253 BCL2L13Q9BXK5 485 aa25.4■■□□□ 1.66
NPHP4-206ENST00000468253 SRCIN1Q9C0H9 1055 aa25.4■■□□□ 1.66
NPHP4-206ENST00000468253 CASP7P55210 303 aa25.39■■□□□ 1.66
NPHP4-206ENST00000468253 CCDC93Q567U6 631 aa25.39■■□□□ 1.66
NPHP4-206ENST00000468253 TMC4Q7Z404 712 aa25.39■■□□□ 1.66
NPHP4-206ENST00000468253 DLEC1Q9Y238 1755 aa25.39■■□□□ 1.65
NPHP4-206ENST00000468253 LTBP3Q9NS15 1303 aa25.38■■□□□ 1.65
NPHP4-206ENST00000468253 GRAPQ13588 217 aa25.38■■□□□ 1.65
NPHP4-206ENST00000468253 CCDC152Q4G0S7 254 aa25.38■■□□□ 1.65
NPHP4-206ENST00000468253 SLC4A10Q6U841 1118 aa25.38■■□□□ 1.65
NPHP4-206ENST00000468253 GRAPLQ8TC17 118 aaPredicted RBP25.38■■□□□ 1.65
NPHP4-206ENST00000468253 JARID2Q92833 1246 aaPredicted RBP25.38■■□□□ 1.65
NPHP4-206ENST00000468253 ZNF219Q9P2Y4 722 aaPredicted RBP25.38■■□□□ 1.65
NPHP4-206ENST00000468253 NOB1Q9ULX3 412 aaKnown RBP25.38■■□□□ 1.65
NPHP4-206ENST00000468253 NFKBIEO00221 500 aa25.37■■□□□ 1.65
NPHP4-206ENST00000468253 UBE3BQ7Z3V4 1068 aa25.37■■□□□ 1.65
NPHP4-206ENST00000468253 API5Q9BZZ5 524 aaKnown RBP25.37■■□□□ 1.65
NPHP4-206ENST00000468253 TMX4Q9H1E5 349 aaPredicted RBP25.37■■□□□ 1.65
NPHP4-206ENST00000468253 ABCC4O15439 1325 aa25.37■■□□□ 1.65
NPHP4-206ENST00000468253 ARFGEF1Q9Y6D6 1849 aa25.36■■□□□ 1.65
NPHP4-206ENST00000468253 IPO8O15397 1037 aaKnown RBP25.36■■□□□ 1.65
NPHP4-206ENST00000468253 LMNB1P20700 586 aa25.36■■□□□ 1.65
NPHP4-206ENST00000468253 SP8Q8IXZ3 490 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms