RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 PCDHB13Q9Y5F0 798 aa9.22□□□□□ -0.93
MSL3-210ENST00000468149 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.22□□□□□ -0.93
MSL3-210ENST00000468149 SRCAPQ6ZRS2 3230 aa9.21□□□□□ -0.93
MSL3-210ENST00000468149 ANKRD62A6NC57 917 aa9.21□□□□□ -0.93
MSL3-210ENST00000468149 ZNF790Q6PG37 636 aa9.21□□□□□ -0.93
MSL3-210ENST00000468149 TICAM2Q86XR7 235 aa9.21□□□□□ -0.93
MSL3-210ENST00000468149 UBXN4Q92575 508 aa9.21□□□□□ -0.93
MSL3-210ENST00000468149 TFCP2L1Q9NZI6 479 aa9.21□□□□□ -0.93
MSL3-210ENST00000468149 ZC3H4Q9UPT8 1303 aaKnown RBP9.21□□□□□ -0.93
MSL3-210ENST00000468149 PTCD1O75127 700 aaKnown RBP9.2□□□□□ -0.94
MSL3-210ENST00000468149 CLSTN1O94985 981 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 CD44P16070 742 aaKnown RBP9.2□□□□□ -0.94
MSL3-210ENST00000468149 ZNF16P17020 682 aaPredicted RBP9.2□□□□□ -0.94
MSL3-210ENST00000468149 TMPOP42166 694 aaKnown RBP9.2□□□□□ -0.94
MSL3-210ENST00000468149 LMOD3Q0VAK6 560 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 ITPK1Q13572 414 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 CCDC184Q52MB2 194 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 MCM10Q7L590 875 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 TTC5Q8N0Z6 440 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 FLAD1Q8NFF5 587 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 SLC4A9Q96Q91 983 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 PNPLA7Q6ZV29 1317 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 CNTNAP4Q9C0A0 1308 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 BTBD11A6QL63 1104 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 RFC5P40937 340 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 RIPK4P57078 832 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 SLC39A6Q13433 755 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
MSL3-210ENST00000468149 LINC00116Q8NCU8 138 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 PNISRQ8TF01 805 aaKnown RBP9.2□□□□□ -0.94
MSL3-210ENST00000468149 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 MRS2Q9HD23 443 aa9.2□□□□□ -0.94
MSL3-210ENST00000468149 SSFA2P28290 1259 aa9.19□□□□□ -0.94
MSL3-210ENST00000468149 ABL2P42684 1182 aa9.19□□□□□ -0.94
MSL3-210ENST00000468149 DCTN1Q14203 1278 aa9.19□□□□□ -0.94
MSL3-210ENST00000468149 TAF7Q15545 349 aaPredicted RBP9.19□□□□□ -0.94
MSL3-210ENST00000468149 CCDC146Q8IYE0 955 aa9.19□□□□□ -0.94
MSL3-210ENST00000468149 TMUB1Q9BVT8 246 aa9.19□□□□□ -0.94
MSL3-210ENST00000468149 MTFR1LQ9H019 292 aa9.19□□□□□ -0.94
MSL3-210ENST00000468149 HEG1Q9ULI3 1381 aa9.18□□□□□ -0.94
MSL3-210ENST00000468149 DNAJC14Q6Y2X3 702 aaPredicted RBP9.18□□□□□ -0.94
MSL3-210ENST00000468149 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
MSL3-210ENST00000468149 PDGFDQ9GZP0 370 aaPredicted RBP9.18□□□□□ -0.94
MSL3-210ENST00000468149 SPON1Q9HCB6 807 aa9.18□□□□□ -0.94
MSL3-210ENST00000468149 CACNA1FO60840 1977 aa9.18□□□□□ -0.94
MSL3-210ENST00000468149 TMEM88BA6NKF7 163 aa9.17□□□□□ -0.94
MSL3-210ENST00000468149 TMEM259Q4ZIN3 620 aa9.17□□□□□ -0.94
MSL3-210ENST00000468149 PPP1R15BQ5SWA1 713 aa9.17□□□□□ -0.94
MSL3-210ENST00000468149 NOL8Q76FK4 1167 aaKnown RBP9.17□□□□□ -0.94
MSL3-210ENST00000468149 MTMR14Q8NCE2 650 aa9.17□□□□□ -0.94
MSL3-210ENST00000468149 ZNF496Q96IT1 587 aaPredicted RBP9.17□□□□□ -0.94
MSL3-210ENST00000468149 FMNL2Q96PY5 1086 aa9.17□□□□□ -0.94
MSL3-210ENST00000468149 TEX13AQ9BXU3 409 aaPredicted RBP9.17□□□□□ -0.94
MSL3-210ENST00000468149 BABAM1Q9NWV8 329 aa9.17□□□□□ -0.94
MSL3-210ENST00000468149 CRKLP46109 303 aaKnown RBP9.16□□□□□ -0.94
MSL3-210ENST00000468149 COL23A1Q86Y22 540 aaPredicted RBP9.16□□□□□ -0.94
MSL3-210ENST00000468149 EMILIN3Q9NT22 766 aa9.16□□□□□ -0.94
MSL3-210ENST00000468149 TRIM35Q9UPQ4 493 aa9.16□□□□□ -0.94
MSL3-210ENST00000468149 RTCBQ9Y3I0 505 aaKnown RBP9.16□□□□□ -0.94
MSL3-210ENST00000468149 BCORQ6W2J9 1755 aa9.16□□□□□ -0.94
MSL3-210ENST00000468149 KIF13BQ9NQT8 1826 aa9.16□□□□□ -0.94
MSL3-210ENST00000468149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.16□□□□□ -0.94
MSL3-210ENST00000468149 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
MSL3-210ENST00000468149 APAF1O14727 1248 aa9.16□□□□□ -0.94
MSL3-210ENST00000468149 RPS6KA4O75676 772 aa9.16□□□□□ -0.94
MSL3-210ENST00000468149 CYP19A1P11511 503 aaPredicted RBP9.16□□□□□ -0.94
MSL3-210ENST00000468149 CLCN1P35523 988 aa9.16□□□□□ -0.94
MSL3-210ENST00000468149 DNAJC10Q8IXB1 793 aa9.16□□□□□ -0.94
MSL3-210ENST00000468149 KIF12Q96FN5 646 aa9.16□□□□□ -0.94
MSL3-210ENST00000468149 PPP1R1BQ9UD71 204 aaPredicted RBP9.16□□□□□ -0.94
MSL3-210ENST00000468149 SCN7AQ01118 1682 aa9.15□□□□□ -0.94
MSL3-210ENST00000468149 NUP98P52948 1817 aa9.15□□□□□ -0.94
MSL3-210ENST00000468149 ZBTB7AO95365 584 aa9.15□□□□□ -0.94
MSL3-210ENST00000468149 STARD3NLO95772 234 aa9.15□□□□□ -0.94
MSL3-210ENST00000468149 PTGER2P43116 358 aa9.15□□□□□ -0.94
MSL3-210ENST00000468149 TRAPPC3LQ5T215 181 aa9.15□□□□□ -0.94
MSL3-210ENST00000468149 AMIGO3Q86WK7 504 aa9.15□□□□□ -0.94
MSL3-210ENST00000468149 THUMPD2Q9BTF0 503 aaKnown RBP9.15□□□□□ -0.94
MSL3-210ENST00000468149 BCL2L13Q9BXK5 485 aa9.15□□□□□ -0.94
MSL3-210ENST00000468149 PRM3Q9NNZ6 103 aa9.15□□□□□ -0.94
MSL3-210ENST00000468149 RRP7AQ9Y3A4 280 aaKnown RBP9.15□□□□□ -0.94
MSL3-210ENST00000468149 AFDNP55196 1824 aaKnown RBP9.14□□□□□ -0.95
MSL3-210ENST00000468149 GRXCR2A6NFK2 248 aa9.14□□□□□ -0.95
MSL3-210ENST00000468149 KCNQ3O43525 872 aa9.14□□□□□ -0.95
MSL3-210ENST00000468149 SNRPA1P09661 255 aaKnown RBP9.14□□□□□ -0.95
MSL3-210ENST00000468149 SSTR3P32745 418 aaPredicted RBP9.14□□□□□ -0.95
MSL3-210ENST00000468149 HDGFL1Q5TGJ6 251 aa9.14□□□□□ -0.95
MSL3-210ENST00000468149 INTS5Q6P9B9 1019 aaKnown RBP9.14□□□□□ -0.95
MSL3-210ENST00000468149 BEGAINQ9BUH8 593 aa9.14□□□□□ -0.95
MSL3-210ENST00000468149 CCDC87Q9NVE4 849 aa9.14□□□□□ -0.95
MSL3-210ENST00000468149 CCER2I3L3R5 266 aa9.13□□□□□ -0.95
MSL3-210ENST00000468149 PHF14O94880 888 aa9.13□□□□□ -0.95
MSL3-210ENST00000468149 CALD1Q05682 793 aaKnown RBP9.13□□□□□ -0.95
MSL3-210ENST00000468149 SF3A1Q15459 793 aaKnown RBP9.13□□□□□ -0.95
MSL3-210ENST00000468149 DIEXFQ68CQ4 756 aaKnown RBP9.13□□□□□ -0.95
MSL3-210ENST00000468149 B4GALNT3Q6L9W6 998 aa9.13□□□□□ -0.95
MSL3-210ENST00000468149 MIS18AQ9NYP9 233 aa9.13□□□□□ -0.95
MSL3-210ENST00000468149 SOS1Q07889 1333 aaPredicted RBP9.13□□□□□ -0.95
MSL3-210ENST00000468149 CHL1O00533 1208 aa9.13□□□□□ -0.95
MSL3-210ENST00000468149 MAP3K13O43283 966 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms