RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TRMT112Q9UI30 125 aaKnown RBP14.91□□□□□ -0.02
CDHR3-205ENST00000468143 NUP98P52948 1817 aa14.91□□□□□ -0.02
CDHR3-205ENST00000468143 IL16Q14005 1332 aa14.91□□□□□ -0.02
CDHR3-205ENST00000468143 HCLS1P14317 486 aaPredicted RBP14.9□□□□□ -0.02
CDHR3-205ENST00000468143 ALDH1B1P30837 517 aa14.9□□□□□ -0.02
CDHR3-205ENST00000468143 TWISTNBQ3B726 338 aaPredicted RBP14.9□□□□□ -0.02
CDHR3-205ENST00000468143 CRY2Q49AN0 593 aa14.9□□□□□ -0.02
CDHR3-205ENST00000468143 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
CDHR3-205ENST00000468143 RIC3Q7Z5B4 369 aa14.9□□□□□ -0.02
CDHR3-205ENST00000468143 WDR63Q8IWG1 891 aa14.9□□□□□ -0.02
CDHR3-205ENST00000468143 C7orf43Q8WVR3 580 aa14.9□□□□□ -0.02
CDHR3-205ENST00000468143 RPGRQ92834 1020 aaKnown RBP14.9□□□□□ -0.02
CDHR3-205ENST00000468143 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
CDHR3-205ENST00000468143 IBTKQ9P2D0 1353 aaPredicted RBP14.89□□□□□ -0.03
CDHR3-205ENST00000468143 GOLGA2Q08379 1002 aa14.89□□□□□ -0.03
CDHR3-205ENST00000468143 SLC10A5Q5PT55 438 aa14.89□□□□□ -0.03
CDHR3-205ENST00000468143 NLRP3Q96P20 1036 aa14.89□□□□□ -0.03
CDHR3-205ENST00000468143 NMRK2Q9NPI5 230 aa14.89□□□□□ -0.03
CDHR3-205ENST00000468143 FANCIQ9NVI1 1328 aa14.89□□□□□ -0.03
CDHR3-205ENST00000468143 KIF3CO14782 793 aa14.88□□□□□ -0.03
CDHR3-205ENST00000468143 RTL5Q5HYW3 569 aaPredicted RBP14.88□□□□□ -0.03
CDHR3-205ENST00000468143 SLC51AQ86UW1 340 aa14.88□□□□□ -0.03
CDHR3-205ENST00000468143 RBM17Q96I25 401 aaKnown RBP14.88□□□□□ -0.03
CDHR3-205ENST00000468143 ISCA1Q9BUE6 129 aa14.88□□□□□ -0.03
CDHR3-205ENST00000468143 TAOK3Q9H2K8 898 aa14.88□□□□□ -0.03
CDHR3-205ENST00000468143 SLX4Q8IY92 1834 aa14.87□□□□□ -0.03
CDHR3-205ENST00000468143 TNRC6CQ9HCJ0 1690 aaKnown RBP14.87□□□□□ -0.03
CDHR3-205ENST00000468143 EXOSC9Q06265 439 aaKnown RBP14.87□□□□□ -0.03
CDHR3-205ENST00000468143 CCDC93Q567U6 631 aa14.87□□□□□ -0.03
CDHR3-205ENST00000468143 SOGA3Q5TF21 947 aa14.87□□□□□ -0.03
CDHR3-205ENST00000468143 FAM89AQ96GI7 184 aa14.87□□□□□ -0.03
CDHR3-205ENST00000468143 MYD88Q99836 296 aa14.87□□□□□ -0.03
CDHR3-205ENST00000468143 SH3TC1Q8TE82 1336 aa14.87□□□□□ -0.03
CDHR3-205ENST00000468143 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
CDHR3-205ENST00000468143 HOXA10P31260 410 aaPredicted RBP14.86□□□□□ -0.03
CDHR3-205ENST00000468143 G2E3Q7L622 706 aa14.86□□□□□ -0.03
CDHR3-205ENST00000468143 CRAMP1Q96RY5 1269 aa14.86□□□□□ -0.03
CDHR3-205ENST00000468143 STK31Q9BXU1 1019 aa14.86□□□□□ -0.03
CDHR3-205ENST00000468143 CHMP4AQ9BY43 222 aa14.86□□□□□ -0.03
CDHR3-205ENST00000468143 RRAGCQ9HB90 399 aa14.86□□□□□ -0.03
CDHR3-205ENST00000468143 VAMP4O75379 141 aa14.85□□□□□ -0.03
CDHR3-205ENST00000468143 JARID2Q92833 1246 aaPredicted RBP14.85□□□□□ -0.03
CDHR3-205ENST00000468143 ZNF277Q9NRM2 450 aaPredicted RBP14.85□□□□□ -0.03
CDHR3-205ENST00000468143 MAP3K2Q9Y2U5 619 aa14.85□□□□□ -0.03
CDHR3-205ENST00000468143 KDM2BQ8NHM5 1336 aa14.85□□□□□ -0.03
CDHR3-205ENST00000468143 PPEF1O14829 653 aaPredicted RBP14.84□□□□□ -0.03
CDHR3-205ENST00000468143 DDX58O95786 925 aaKnown RBP14.84□□□□□ -0.03
CDHR3-205ENST00000468143 FKBP4Q02790 459 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDHR3-205ENST00000468143 RTKN2Q8IZC4 609 aa14.84□□□□□ -0.03
CDHR3-205ENST00000468143 RNF123Q5XPI4 1314 aa14.84□□□□□ -0.03
CDHR3-205ENST00000468143 LTBP3Q9NS15 1303 aa14.84□□□□□ -0.03
CDHR3-205ENST00000468143 RIC1Q4ADV7 1423 aa14.83□□□□□ -0.03
CDHR3-205ENST00000468143 PI4KAP2A4QPH2 592 aa14.83□□□□□ -0.04
CDHR3-205ENST00000468143 GLTPD2A6NH11 291 aa14.83□□□□□ -0.04
CDHR3-205ENST00000468143 TRIM28Q13263 835 aaKnown RBP14.83□□□□□ -0.04
CDHR3-205ENST00000468143 KSR2Q6VAB6 950 aa14.83□□□□□ -0.04
CDHR3-205ENST00000468143 PI4KAP1Q8N8J0 262 aa14.83□□□□□ -0.04
CDHR3-205ENST00000468143 METTL22Q9BUU2 404 aaPredicted RBP14.83□□□□□ -0.04
CDHR3-205ENST00000468143 CACNA1SQ13698 1873 aa14.82□□□□□ -0.04
CDHR3-205ENST00000468143 IRS4O14654 1257 aaPredicted RBP14.82□□□□□ -0.04
CDHR3-205ENST00000468143 DDX46Q7L014 1031 aaKnown RBP14.82□□□□□ -0.04
CDHR3-205ENST00000468143 MYH16Q9H6N6 1097 aa14.82□□□□□ -0.04
CDHR3-205ENST00000468143 ABCC4O15439 1325 aa14.82□□□□□ -0.04
CDHR3-205ENST00000468143 SBF1O95248 1867 aa14.81□□□□□ -0.04
CDHR3-205ENST00000468143 DPY19L2Q6NUT2 758 aa14.81□□□□□ -0.04
CDHR3-205ENST00000468143 ZC3H4Q9UPT8 1303 aaKnown RBP14.81□□□□□ -0.04
CDHR3-205ENST00000468143 CCER2I3L3R5 266 aa14.8□□□□□ -0.04
CDHR3-205ENST00000468143 DDNO94850 711 aaPredicted RBP14.8□□□□□ -0.04
CDHR3-205ENST00000468143 IARSP41252 1262 aaKnown RBP14.8□□□□□ -0.04
CDHR3-205ENST00000468143 FLIIQ13045 1269 aa14.8□□□□□ -0.04
CDHR3-205ENST00000468143 CC2D2BQ6DHV5 1058 aa14.8□□□□□ -0.04
CDHR3-205ENST00000468143 C16orf71Q8IYS4 520 aaPredicted RBP14.8□□□□□ -0.04
CDHR3-205ENST00000468143 ZBTB38Q8NAP3 1195 aaPredicted RBP14.8□□□□□ -0.04
CDHR3-205ENST00000468143 CCDC191Q8NCU4 936 aa14.8□□□□□ -0.04
CDHR3-205ENST00000468143 TMX4Q9H1E5 349 aaPredicted RBP14.8□□□□□ -0.04
CDHR3-205ENST00000468143 CWC25Q9NXE8 425 aaPredicted RBP14.8□□□□□ -0.04
CDHR3-205ENST00000468143 ATP6V0A2Q9Y487 856 aa14.8□□□□□ -0.04
CDHR3-205ENST00000468143 ZNF521Q96K83 1311 aa14.8□□□□□ -0.04
CDHR3-205ENST00000468143 ANKRD36CQ5JPF3 1778 aa14.8□□□□□ -0.04
CDHR3-205ENST00000468143 BBOX1O75936 387 aa14.79□□□□□ -0.04
CDHR3-205ENST00000468143 TOMM70O94826 608 aa14.79□□□□□ -0.04
CDHR3-205ENST00000468143 IGKV5-2P06315 115 aa14.79□□□□□ -0.04
CDHR3-205ENST00000468143 FKBP5Q13451 457 aaPredicted RBP14.79□□□□□ -0.04
CDHR3-205ENST00000468143 GRAPQ13588 217 aa14.79□□□□□ -0.04
CDHR3-205ENST00000468143 CWF19L2Q2TBE0 894 aaKnown RBP14.79□□□□□ -0.04
CDHR3-205ENST00000468143 FER1L6Q2WGJ9 1857 aa14.79□□□□□ -0.04
CDHR3-205ENST00000468143 GRAPLQ8TC17 118 aaPredicted RBP14.79□□□□□ -0.04
CDHR3-205ENST00000468143 ARFGEF2Q9Y6D5 1785 aa14.79□□□□□ -0.04
CDHR3-205ENST00000468143 PCCAP05165 728 aaPredicted RBP14.78□□□□□ -0.04
CDHR3-205ENST00000468143 NEXNQ0ZGT2 675 aa14.78□□□□□ -0.04
CDHR3-205ENST00000468143 SF3B3Q15393 1217 aaKnown RBP14.78□□□□□ -0.04
CDHR3-205ENST00000468143 SP8Q8IXZ3 490 aa14.78□□□□□ -0.04
CDHR3-205ENST00000468143 CELF1Q92879 486 aaKnown RBP14.78□□□□□ -0.04
CDHR3-205ENST00000468143 CCDC85AQ96PX6 553 aaPredicted RBP14.78□□□□□ -0.04
CDHR3-205ENST00000468143 PSMD1Q99460 953 aa14.78□□□□□ -0.04
CDHR3-205ENST00000468143 SNED1Q8TER0 1413 aa14.77□□□□□ -0.04
CDHR3-205ENST00000468143 POTECB2RU33 542 aa14.77□□□□□ -0.05
CDHR3-205ENST00000468143 VEGFAP15692 232 aaPredicted RBP14.77□□□□□ -0.05
CDHR3-205ENST00000468143 DIEXFQ68CQ4 756 aaKnown RBP14.77□□□□□ -0.05
CDHR3-205ENST00000468143 MIER1Q8N108 512 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms