RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 ARHGEF12Q9NZN5 1544 aa7.74□□□□□ -1.17
U2AF1-207ENST00000468039 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.74□□□□□ -1.17
U2AF1-207ENST00000468039 TMEM229AB2RXF0 380 aa7.74□□□□□ -1.17
U2AF1-207ENST00000468039 ZBTB7BO15156 539 aaPredicted RBP7.74□□□□□ -1.17
U2AF1-207ENST00000468039 STAU1O95793 577 aaKnown RBP7.74□□□□□ -1.17
U2AF1-207ENST00000468039 PTSQ03393 145 aa7.74□□□□□ -1.17
U2AF1-207ENST00000468039 SRSF11Q05519 484 aaKnown RBP7.74□□□□□ -1.17
U2AF1-207ENST00000468039 GNASQ5JWF2 1037 aa7.74□□□□□ -1.17
U2AF1-207ENST00000468039 FOXD4L5Q5VV16 416 aaPredicted RBP7.74□□□□□ -1.17
U2AF1-207ENST00000468039 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.74□□□□□ -1.17
U2AF1-207ENST00000468039 ZNF358Q9NW07 568 aa7.74□□□□□ -1.17
U2AF1-207ENST00000468039 POGZQ7Z3K3 1410 aa7.74□□□□□ -1.17
U2AF1-207ENST00000468039 SAMD9LQ8IVG5 1584 aa7.74□□□□□ -1.17
U2AF1-207ENST00000468039 SUPT6HQ7KZ85 1726 aaKnown RBP7.74□□□□□ -1.17
U2AF1-207ENST00000468039 ZNF644Q9H582 1327 aaPredicted RBP7.74□□□□□ -1.17
U2AF1-207ENST00000468039 ACIN1Q9UKV3 1341 aaKnown RBP7.74□□□□□ -1.17
U2AF1-207ENST00000468039 RICTORQ6R327 1708 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 TRAPPC8Q9Y2L5 1435 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 PPP1R15AO75807 674 aaPredicted RBP7.73□□□□□ -1.17
U2AF1-207ENST00000468039 SMTNP53814 917 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 SEC13P55735 322 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 PTK7Q13308 1070 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 CRTC2Q53ET0 693 aaPredicted RBP7.73□□□□□ -1.17
U2AF1-207ENST00000468039 ZMYM1Q5SVZ6 1142 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 SV2AQ7L0J3 742 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 PRICKLE2Q7Z3G6 844 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 PPARGC1BQ86YN6 1023 aaKnown RBP7.73□□□□□ -1.17
U2AF1-207ENST00000468039 ANKMY2Q8IV38 441 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 AFAP1Q8N556 730 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 NBPF15Q8N660 670 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 CFDP1Q9UEE9 299 aaPredicted RBP7.73□□□□□ -1.17
U2AF1-207ENST00000468039 KIAA1024Q9UPX6 916 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 SYCP2Q9BX26 1530 aa7.73□□□□□ -1.17
U2AF1-207ENST00000468039 YEATS2Q9ULM3 1422 aa7.72□□□□□ -1.17
U2AF1-207ENST00000468039 HNRNPMP52272 730 aaKnown RBP eCLIP7.72□□□□□ -1.17
U2AF1-207ENST00000468039 DPYDQ12882 1025 aa7.72□□□□□ -1.17
U2AF1-207ENST00000468039 FAM200AQ8TCP9 573 aa7.72□□□□□ -1.17
U2AF1-207ENST00000468039 SLC4A9Q96Q91 983 aa7.72□□□□□ -1.17
U2AF1-207ENST00000468039 GRIP2Q9C0E4 1043 aa7.72□□□□□ -1.17
U2AF1-207ENST00000468039 NOVA2Q9UNW9 492 aaKnown RBP7.72□□□□□ -1.17
U2AF1-207ENST00000468039 ITSN2Q9NZM3 1697 aa7.71□□□□□ -1.18
U2AF1-207ENST00000468039 A6NJY4 79 aa7.71□□□□□ -1.18
U2AF1-207ENST00000468039 M0R2N6 131 aa7.71□□□□□ -1.18
U2AF1-207ENST00000468039 TAS1R3Q7RTX0 852 aa7.71□□□□□ -1.18
U2AF1-207ENST00000468039 ALYREFQ86V81 257 aaKnown RBP7.71□□□□□ -1.18
U2AF1-207ENST00000468039 CCDC155Q8N6L0 562 aa7.71□□□□□ -1.18
U2AF1-207ENST00000468039 HRH3Q9Y5N1 445 aa7.71□□□□□ -1.18
U2AF1-207ENST00000468039 ZMYM4Q5VZL5 1548 aa7.71□□□□□ -1.18
U2AF1-207ENST00000468039 ZNF518AQ6AHZ1 1483 aa7.7□□□□□ -1.18
U2AF1-207ENST00000468039 ZFYVE16Q7Z3T8 1539 aa7.7□□□□□ -1.18
U2AF1-207ENST00000468039 ARHGEF40Q8TER5 1519 aa7.7□□□□□ -1.18
U2AF1-207ENST00000468039 SFI1A8K8P3 1242 aa7.7□□□□□ -1.18
U2AF1-207ENST00000468039 ATG7O95352 703 aa7.7□□□□□ -1.18
U2AF1-207ENST00000468039 RHBDD1Q8TEB9 315 aa7.7□□□□□ -1.18
U2AF1-207ENST00000468039 HINFPQ9BQA5 517 aa7.7□□□□□ -1.18
U2AF1-207ENST00000468039 FHDC1Q9C0D6 1143 aaPredicted RBP7.7□□□□□ -1.18
U2AF1-207ENST00000468039 CHMP3Q9Y3E7 222 aa7.7□□□□□ -1.18
U2AF1-207ENST00000468039 CAMSAP2Q08AD1 1489 aa7.69□□□□□ -1.18
U2AF1-207ENST00000468039 KDM5CP41229 1560 aa7.69□□□□□ -1.18
U2AF1-207ENST00000468039 SPATA31C2B4DYI2 1134 aa7.69□□□□□ -1.18
U2AF1-207ENST00000468039 CDK2AP1O14519 115 aa7.69□□□□□ -1.18
U2AF1-207ENST00000468039 RHOQP17081 205 aa7.69□□□□□ -1.18
U2AF1-207ENST00000468039 POU4F2Q12837 409 aa7.69□□□□□ -1.18
U2AF1-207ENST00000468039 ELOAQ14241 798 aaKnown RBP7.69□□□□□ -1.18
U2AF1-207ENST00000468039 VWA5B2Q8N398 1253 aa7.69□□□□□ -1.18
U2AF1-207ENST00000468039 NIFKQ9BYG3 293 aaKnown RBP7.69□□□□□ -1.18
U2AF1-207ENST00000468039 MYOM3Q5VTT5 1437 aa7.69□□□□□ -1.18
U2AF1-207ENST00000468039 CDC14CA4D256 554 aa7.68□□□□□ -1.18
U2AF1-207ENST00000468039 SRPK2P78362 688 aaKnown RBP7.68□□□□□ -1.18
U2AF1-207ENST00000468039 TRIM26Q12899 539 aaPredicted RBP7.68□□□□□ -1.18
U2AF1-207ENST00000468039 MTFR1Q15390 333 aa7.68□□□□□ -1.18
U2AF1-207ENST00000468039 WDR44Q5JSH3 913 aa7.68□□□□□ -1.18
U2AF1-207ENST00000468039 NBPF10Q6P3W6 841 aaKnown RBP7.68□□□□□ -1.18
U2AF1-207ENST00000468039 TNS4Q8IZW8 715 aa7.68□□□□□ -1.18
U2AF1-207ENST00000468039 CABP1Q9NZU7 370 aa7.68□□□□□ -1.18
U2AF1-207ENST00000468039 ARID4BQ4LE39 1312 aaPredicted RBP7.68□□□□□ -1.18
U2AF1-207ENST00000468039 KIAA1107Q9UPP5 1409 aa7.68□□□□□ -1.18
U2AF1-207ENST00000468039 PLEKHH2Q8IVE3 1493 aa7.68□□□□□ -1.18
U2AF1-207ENST00000468039 MBD5Q9P267 1494 aa7.68□□□□□ -1.18
U2AF1-207ENST00000468039 HECW2Q9P2P5 1572 aa7.67□□□□□ -1.18
U2AF1-207ENST00000468039 ABCA6Q8N139 1617 aa7.67□□□□□ -1.18
U2AF1-207ENST00000468039 SIGLEC1Q9BZZ2 1709 aa7.67□□□□□ -1.18
U2AF1-207ENST00000468039 CSB-PGBD3P0DP91 1061 aa7.67□□□□□ -1.18
U2AF1-207ENST00000468039 ITGA6P23229 1130 aa7.67□□□□□ -1.18
U2AF1-207ENST00000468039 PHKA2P46019 1235 aa7.67□□□□□ -1.18
U2AF1-207ENST00000468039 TSEN2Q8NCE0 465 aaKnown RBP7.67□□□□□ -1.18
U2AF1-207ENST00000468039 NEDD1Q8NHV4 660 aa7.67□□□□□ -1.18
U2AF1-207ENST00000468039 TIMMDC1Q9NPL8 285 aa7.67□□□□□ -1.18
U2AF1-207ENST00000468039 SCHIP1Q9P0W5 487 aaPredicted RBP7.67□□□□□ -1.18
U2AF1-207ENST00000468039 MAGI2Q86UL8 1455 aa7.67□□□□□ -1.18
U2AF1-207ENST00000468039 DIP2CQ9Y2E4 1556 aa7.67□□□□□ -1.18
U2AF1-207ENST00000468039 KRBA1A5PL33 1030 aa7.66□□□□□ -1.18
U2AF1-207ENST00000468039 COBLO75128 1261 aa7.66□□□□□ -1.18
U2AF1-207ENST00000468039 DKK1O94907 266 aa7.66□□□□□ -1.18
U2AF1-207ENST00000468039 MLECQ14165 292 aa7.66□□□□□ -1.18
U2AF1-207ENST00000468039 SLC9A9Q8IVB4 645 aa7.66□□□□□ -1.18
U2AF1-207ENST00000468039 SPAG9O60271 1321 aaKnown RBP7.66□□□□□ -1.18
U2AF1-207ENST00000468039 MLH3Q9UHC1 1453 aa7.66□□□□□ -1.18
U2AF1-207ENST00000468039 SCO2A0A1W2PP80 73 aa7.65□□□□□ -1.18
U2AF1-207ENST00000468039 ATP10AO60312 1499 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms