RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 AKAP4Q5JQC9 854 aa17.31■□□□□ 0.36
SEC16A-208ENST00000467838 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
SEC16A-208ENST00000467838 ZNF830Q96NB3 372 aaPredicted RBP17.31■□□□□ 0.36
SEC16A-208ENST00000467838 MED23Q9ULK4 1368 aa17.31■□□□□ 0.36
SEC16A-208ENST00000467838 AP5Z1O43299 807 aa17.3■□□□□ 0.36
SEC16A-208ENST00000467838 ZKSCAN1P17029 563 aaPredicted RBP17.3■□□□□ 0.36
SEC16A-208ENST00000467838 CREB3L3Q68CJ9 461 aa17.3■□□□□ 0.36
SEC16A-208ENST00000467838 RBM8AQ9Y5S9 174 aaKnown RBP17.3■□□□□ 0.36
SEC16A-208ENST00000467838 KCNQ3O43525 872 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 CCDC192P0DO97 292 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 NBPF6Q5VWK0 638 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 NUTM2GQ5VZR2 741 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 KIAA1524Q8TCG1 905 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 NBPF4Q96M43 638 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 PXDNQ92626 1479 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 IFIT2P09913 472 aaKnown RBP17.29■□□□□ 0.36
SEC16A-208ENST00000467838 PDCP20941 246 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 PSMA5P28066 241 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 KCNF1Q9H3M0 494 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 TPCN1Q9ULQ1 816 aa17.29■□□□□ 0.36
SEC16A-208ENST00000467838 ZNF335Q9H4Z2 1342 aaPredicted RBP17.28■□□□□ 0.36
SEC16A-208ENST00000467838 KRT85P78386 507 aa17.28■□□□□ 0.36
SEC16A-208ENST00000467838 KSR2Q6VAB6 950 aa17.28■□□□□ 0.36
SEC16A-208ENST00000467838 TTC6Q86TZ1 520 aa17.28■□□□□ 0.36
SEC16A-208ENST00000467838 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
SEC16A-208ENST00000467838 SLC27A2O14975 620 aa17.28■□□□□ 0.36
SEC16A-208ENST00000467838 RBM43Q6ZSC3 357 aaKnown RBP17.28■□□□□ 0.36
SEC16A-208ENST00000467838 SMAP1Q8IYB5 467 aaPredicted RBP17.28■□□□□ 0.36
SEC16A-208ENST00000467838 ZNF710Q8N1W2 664 aa17.28■□□□□ 0.36
SEC16A-208ENST00000467838 CCDC94Q9BW85 323 aaPredicted RBP17.28■□□□□ 0.36
SEC16A-208ENST00000467838 BTBD11A6QL63 1104 aa17.27■□□□□ 0.36
SEC16A-208ENST00000467838 ATF3P18847 181 aa17.27■□□□□ 0.36
SEC16A-208ENST00000467838 ANKRD1Q15327 319 aa17.27■□□□□ 0.36
SEC16A-208ENST00000467838 TSGA10IPQ3SY00 556 aa17.27■□□□□ 0.36
SEC16A-208ENST00000467838 DNTTIP2Q5QJE6 756 aaKnown RBP17.27■□□□□ 0.36
SEC16A-208ENST00000467838 ORAI2Q96SN7 254 aa17.27■□□□□ 0.36
SEC16A-208ENST00000467838 MAP3K2Q9Y2U5 619 aa17.27■□□□□ 0.36
SEC16A-208ENST00000467838 DCCP43146 1447 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 VPS37CA5D8V6 355 aaPredicted RBP17.26■□□□□ 0.35
SEC16A-208ENST00000467838 TEFQ10587 303 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 NMIQ13287 307 aaPredicted RBP17.26■□□□□ 0.35
SEC16A-208ENST00000467838 AACSQ86V21 672 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 C1orf167Q5SNV9 1468 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 ANXA1P04083 346 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 MAP3K11Q16584 847 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 CDC37L1Q7L3B6 337 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 C17orf53Q8N3J3 647 aaPredicted RBP17.26■□□□□ 0.35
SEC16A-208ENST00000467838 LINS1Q8NG48 757 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 NUP62CLQ9H1M0 184 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 C9orf78Q9NZ63 289 aaPredicted RBP17.26■□□□□ 0.35
SEC16A-208ENST00000467838 PA2G4Q9UQ80 394 aaKnown RBP17.26■□□□□ 0.35
SEC16A-208ENST00000467838 XIRP1Q702N8 1843 aaKnown RBP17.26■□□□□ 0.35
SEC16A-208ENST00000467838 SLIT3O75094 1523 aa17.26■□□□□ 0.35
SEC16A-208ENST00000467838 RNMTO43148 476 aaKnown RBP17.25■□□□□ 0.35
SEC16A-208ENST00000467838 GIGYF1O75420 1035 aaPredicted RBP17.25■□□□□ 0.35
SEC16A-208ENST00000467838 SASH1O94885 1247 aa17.25■□□□□ 0.35
SEC16A-208ENST00000467838 AMOTQ4VCS5 1084 aa17.25■□□□□ 0.35
SEC16A-208ENST00000467838 LARP1BQ659C4 914 aaKnown RBP17.25■□□□□ 0.35
SEC16A-208ENST00000467838 ZNF530Q6P9A1 599 aaPredicted RBP17.25■□□□□ 0.35
SEC16A-208ENST00000467838 MPNDQ8N594 471 aa17.25■□□□□ 0.35
SEC16A-208ENST00000467838 NECAB1Q8N987 351 aa17.25■□□□□ 0.35
SEC16A-208ENST00000467838 KAZALD1Q96I82 304 aa17.25■□□□□ 0.35
SEC16A-208ENST00000467838 FAM227BQ96M60 508 aa17.25■□□□□ 0.35
SEC16A-208ENST00000467838 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
SEC16A-208ENST00000467838 MRVI1Q9Y6F6 885 aa17.25■□□□□ 0.35
SEC16A-208ENST00000467838 RFX7Q2KHR2 1363 aa17.25■□□□□ 0.35
SEC16A-208ENST00000467838 RPS6KB1P23443 525 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 PLEKHO1Q53GL0 409 aaPredicted RBP17.24■□□□□ 0.35
SEC16A-208ENST00000467838 SCAND2PQ9GZW5 306 aaPredicted RBP17.24■□□□□ 0.35
SEC16A-208ENST00000467838 PYCARDQ9ULZ3 195 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 NPHP3Q7Z494 1330 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 GRM8O00222 908 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 PSME1Q06323 249 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 TYRO3Q06418 890 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 PROSER3Q2NL68 480 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 RNF20Q5VTR2 975 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 EAF2Q96CJ1 260 aaPredicted RBP17.24■□□□□ 0.35
SEC16A-208ENST00000467838 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 DDX19AQ9NUU7 478 aaKnown RBP17.24■□□□□ 0.35
SEC16A-208ENST00000467838 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 MST1RQ04912 1400 aa17.24■□□□□ 0.35
SEC16A-208ENST00000467838 A0A0D9SFI3 127 aa17.23■□□□□ 0.35
SEC16A-208ENST00000467838 LIG1P18858 919 aa17.23■□□□□ 0.35
SEC16A-208ENST00000467838 TOB2Q14106 344 aaPredicted RBP17.22■□□□□ 0.35
SEC16A-208ENST00000467838 USPL1Q5W0Q7 1092 aa17.22■□□□□ 0.35
SEC16A-208ENST00000467838 BLOC1S2Q6QNY1 142 aa17.22■□□□□ 0.35
SEC16A-208ENST00000467838 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
SEC16A-208ENST00000467838 KCNH5Q8NCM2 988 aa17.22■□□□□ 0.35
SEC16A-208ENST00000467838 KIF1AQ12756 1690 aa17.22■□□□□ 0.35
SEC16A-208ENST00000467838 CWF19L2Q2TBE0 894 aaKnown RBP17.22■□□□□ 0.35
SEC16A-208ENST00000467838 CLSTN2Q9H4D0 955 aa17.22■□□□□ 0.35
SEC16A-208ENST00000467838 PRDM4Q9UKN5 801 aa17.22■□□□□ 0.35
SEC16A-208ENST00000467838 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.22■□□□□ 0.35
SEC16A-208ENST00000467838 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
SEC16A-208ENST00000467838 COL9A3Q14050 684 aaPredicted RBP17.21■□□□□ 0.35
SEC16A-208ENST00000467838 BICC1Q9H694 974 aaKnown RBP17.21■□□□□ 0.35
SEC16A-208ENST00000467838 C5P01031 1676 aa17.21■□□□□ 0.35
SEC16A-208ENST00000467838 KCNJ4P48050 445 aa17.2■□□□□ 0.34
SEC16A-208ENST00000467838 G3BP1Q13283 466 aaKnown RBP eCLIP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms