RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 DZIP3Q86Y13 1208 aaKnown RBP15.17■□□□□ 0.02
HDLBP-231ENST00000467435 OSBPL3Q9H4L5 887 aa15.17■□□□□ 0.02
HDLBP-231ENST00000467435 IL1RAPL2Q9NP60 686 aa15.17■□□□□ 0.02
HDLBP-231ENST00000467435 PA2G4Q9UQ80 394 aaKnown RBP15.17■□□□□ 0.02
HDLBP-231ENST00000467435 ERVV-1B6SEH8 477 aa15.16■□□□□ 0.02
HDLBP-231ENST00000467435 EIF5P55010 431 aaKnown RBP15.16■□□□□ 0.02
HDLBP-231ENST00000467435 HLFQ16534 295 aa15.16■□□□□ 0.02
HDLBP-231ENST00000467435 PTF1AQ7RTS3 328 aa15.16■□□□□ 0.02
HDLBP-231ENST00000467435 UPF2Q9HAU5 1272 aaKnown RBP15.16■□□□□ 0.02
HDLBP-231ENST00000467435 CASZ1Q86V15 1759 aa15.16■□□□□ 0.02
HDLBP-231ENST00000467435 AOX1Q06278 1338 aa15.16■□□□□ 0.02
HDLBP-231ENST00000467435 C4AP0C0L4 1744 aa15.15■□□□□ 0.02
HDLBP-231ENST00000467435 C4BP0C0L5 1744 aa15.15■□□□□ 0.02
HDLBP-231ENST00000467435 CDC45O75419 566 aa15.15■□□□□ 0.02
HDLBP-231ENST00000467435 TRIM28Q13263 835 aaKnown RBP15.15■□□□□ 0.02
HDLBP-231ENST00000467435 LINC00116Q8NCU8 138 aa15.15■□□□□ 0.02
HDLBP-231ENST00000467435 DDX60Q8IY21 1712 aaKnown RBP15.14■□□□□ 0.01
HDLBP-231ENST00000467435 GPTP24298 496 aa15.14■□□□□ 0.01
HDLBP-231ENST00000467435 FOXO4P98177 505 aa15.14■□□□□ 0.01
HDLBP-231ENST00000467435 G3BP1Q13283 466 aaKnown RBP eCLIP15.14■□□□□ 0.017e-13■■■□□ 17.4
HDLBP-231ENST00000467435 RTL5Q5HYW3 569 aaPredicted RBP15.14■□□□□ 0.01
HDLBP-231ENST00000467435 TBC1D2BQ9UPU7 963 aa15.14■□□□□ 0.01
HDLBP-231ENST00000467435 CNTNAP4Q9C0A0 1308 aa15.14■□□□□ 0.01
HDLBP-231ENST00000467435 PCCAP05165 728 aaPredicted RBP15.13■□□□□ 0.01
HDLBP-231ENST00000467435 RFX5P48382 616 aaPredicted RBP15.13■□□□□ 0.01
HDLBP-231ENST00000467435 MFAP1P55081 439 aaKnown RBP15.13■□□□□ 0.01
HDLBP-231ENST00000467435 TSHZ3Q63HK5 1081 aa15.13■□□□□ 0.01
HDLBP-231ENST00000467435 LMBR1LQ6UX01 489 aa15.13■□□□□ 0.01
HDLBP-231ENST00000467435 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
HDLBP-231ENST00000467435 SIL1Q9H173 461 aa15.13■□□□□ 0.01
HDLBP-231ENST00000467435 COPRSQ9NQ92 184 aa15.13■□□□□ 0.01
HDLBP-231ENST00000467435 STAP2Q9UGK3 403 aa15.13■□□□□ 0.01
HDLBP-231ENST00000467435 CHMP3Q9Y3E7 222 aa15.13■□□□□ 0.01
HDLBP-231ENST00000467435 CDHR2Q9BYE9 1310 aa15.13■□□□□ 0.01
HDLBP-231ENST00000467435 COL24A1Q17RW2 1714 aa15.12■□□□□ 0.01
HDLBP-231ENST00000467435 TBC1D9Q6ZT07 1266 aa15.12■□□□□ 0.01
HDLBP-231ENST00000467435 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
HDLBP-231ENST00000467435 CLASRPQ8N2M8 674 aaKnown RBP15.12■□□□□ 0.01
HDLBP-231ENST00000467435 ZBTB38Q8NAP3 1195 aaPredicted RBP15.12■□□□□ 0.01
HDLBP-231ENST00000467435 KLHDC4Q8TBB5 520 aa15.12■□□□□ 0.01
HDLBP-231ENST00000467435 CAMTA2O94983 1202 aa15.11■□□□□ 0.01
HDLBP-231ENST00000467435 SDSP20132 328 aa15.11■□□□□ 0.01
HDLBP-231ENST00000467435 PTPN12Q05209 780 aaKnown RBP15.11■□□□□ 0.01
HDLBP-231ENST00000467435 ZNF772Q68DY9 489 aaPredicted RBP15.11■□□□□ 0.01
HDLBP-231ENST00000467435 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
HDLBP-231ENST00000467435 CCNL1Q9UK58 526 aaPredicted RBP15.11■□□□□ 0.01
HDLBP-231ENST00000467435 UBN2Q6ZU65 1347 aa15.11■□□□□ 0.01
HDLBP-231ENST00000467435 SASH1O94885 1247 aa15.1■□□□□ 0.01
HDLBP-231ENST00000467435 KCNQ4P56696 695 aa15.1■□□□□ 0.01
HDLBP-231ENST00000467435 ZNF34Q8IZ26 560 aa15.1■□□□□ 0.01
HDLBP-231ENST00000467435 DDRGK1Q96HY6 314 aa15.1■□□□□ 0.01
HDLBP-231ENST00000467435 TBC1D32Q96NH3 1257 aa15.1■□□□□ 0.01
HDLBP-231ENST00000467435 PLA2G12BQ9BX93 195 aa15.1■□□□□ 0.01
HDLBP-231ENST00000467435 USP42Q9H9J4 1324 aaKnown RBP15.1■□□□□ 0.01
HDLBP-231ENST00000467435 SPEF2Q9C093 1822 aa15.1■□□□□ 0.01
HDLBP-231ENST00000467435 LRP5O75197 1615 aa15.1■□□□□ 0.01
HDLBP-231ENST00000467435 IFIT2P09913 472 aaKnown RBP15.09■□□□□ 0.01
HDLBP-231ENST00000467435 CASC1Q6TDU7 716 aa15.09■□□□□ 0.01
HDLBP-231ENST00000467435 KRT27Q7Z3Y8 459 aa15.09■□□□□ 0.01
HDLBP-231ENST00000467435 AACSQ86V21 672 aa15.09■□□□□ 0.01
HDLBP-231ENST00000467435 FAM89AQ96GI7 184 aa15.09■□□□□ 0.01
HDLBP-231ENST00000467435 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
HDLBP-231ENST00000467435 UBR3Q6ZT12 1888 aa15.09■□□□□ 0.01
HDLBP-231ENST00000467435 TTC41PQ6P2S7 1318 aa15.09■□□□□ 0.01
HDLBP-231ENST00000467435 EIF5BO60841 1220 aaKnown RBP15.08■□□□□ 0
HDLBP-231ENST00000467435 RC3H1Q5TC82 1133 aaKnown RBP15.08■□□□□ 0
HDLBP-231ENST00000467435 FAM196AQ6ZSG2 479 aa15.08■□□□□ 0
HDLBP-231ENST00000467435 PI4K2BQ8TCG2 481 aa15.08■□□□□ 0
HDLBP-231ENST00000467435 GPATCH3Q96I76 525 aa15.08■□□□□ 0
HDLBP-231ENST00000467435 TRMT112Q9UI30 125 aaKnown RBP15.08■□□□□ 0
HDLBP-231ENST00000467435 ZNF652Q9Y2D9 606 aa15.08■□□□□ 0
HDLBP-231ENST00000467435 RBM6P78332 1123 aaKnown RBP15.07■□□□□ 0
HDLBP-231ENST00000467435 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.07■□□□□ 0
HDLBP-231ENST00000467435 TRIM6-TRIM34B2RNG4 842 aa15.06■□□□□ 0
HDLBP-231ENST00000467435 IRS4O14654 1257 aaPredicted RBP15.06■□□□□ 0
HDLBP-231ENST00000467435 PARP10Q53GL7 1025 aa15.06■□□□□ 0
HDLBP-231ENST00000467435 EAF2Q96CJ1 260 aaPredicted RBP15.06■□□□□ 0
HDLBP-231ENST00000467435 C22orf23Q9BZE7 217 aa15.06■□□□□ 0
HDLBP-231ENST00000467435 ECHDC1Q9NTX5 307 aa15.06■□□□□ 0
HDLBP-231ENST00000467435 ZNF609O15014 1411 aa15.06■□□□□ 0
HDLBP-231ENST00000467435 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
HDLBP-231ENST00000467435 ERC2O15083 957 aa15.05■□□□□ -0
HDLBP-231ENST00000467435 GNPATO15228 680 aa15.05■□□□□ -0
HDLBP-231ENST00000467435 MSH5O43196 834 aa15.05■□□□□ -0
HDLBP-231ENST00000467435 RPS6KA4O75676 772 aa15.05■□□□□ -0
HDLBP-231ENST00000467435 GLRX3O76003 335 aaKnown RBP15.05■□□□□ -0
HDLBP-231ENST00000467435 CTSWP56202 376 aa15.05■□□□□ -0
HDLBP-231ENST00000467435 TFCP2Q12800 502 aa15.05■□□□□ -0
HDLBP-231ENST00000467435 CCDC57Q2TAC2 916 aa15.05■□□□□ -0
HDLBP-231ENST00000467435 ILDR1Q86SU0 546 aaPredicted RBP15.05■□□□□ -0
HDLBP-231ENST00000467435 SYNE4Q8N205 404 aa15.05■□□□□ -0
HDLBP-231ENST00000467435 RILPL2Q969X0 211 aa15.05■□□□□ -0
HDLBP-231ENST00000467435 NIP7Q9Y221 180 aaKnown RBP eCLIP15.05■□□□□ -0
HDLBP-231ENST00000467435 ARAP2Q8WZ64 1704 aa15.05■□□□□ -0
HDLBP-231ENST00000467435 SH3TC1Q8TE82 1336 aa15.04■□□□□ -0
HDLBP-231ENST00000467435 EYA2O00167 538 aa15.04■□□□□ -0
HDLBP-231ENST00000467435 RGL2O15211 777 aa15.04■□□□□ -0
HDLBP-231ENST00000467435 PDE8AO60658 829 aa15.04■□□□□ -0
HDLBP-231ENST00000467435 CIAO1O76071 339 aa15.04■□□□□ -0
HDLBP-231ENST00000467435 CSF1RP07333 972 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms