RNA–Protein interactions for RNA: ENST00000467350.1

RERE-209, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-209ENST00000467350 TRIM35Q9UPQ4 493 aa13.47□□□□□ -0.25
RERE-209ENST00000467350 ARFGEF1Q9Y6D6 1849 aa13.47□□□□□ -0.25
RERE-209ENST00000467350 ANP32CO43423 234 aa13.46□□□□□ -0.25
RERE-209ENST00000467350 NECTIN2Q92692 538 aa13.46□□□□□ -0.25
RERE-209ENST00000467350 PSMD1Q99460 953 aa13.46□□□□□ -0.25
RERE-209ENST00000467350 BRCA1P38398 1863 aaKnown RBP13.45□□□□□ -0.26
RERE-209ENST00000467350 SCN7AQ01118 1682 aa13.45□□□□□ -0.26
RERE-209ENST00000467350 BBOX1O75936 387 aa13.45□□□□□ -0.26
RERE-209ENST00000467350 IARSP41252 1262 aaKnown RBP13.45□□□□□ -0.26
RERE-209ENST00000467350 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
RERE-209ENST00000467350 HDGFL1Q5TGJ6 251 aa13.45□□□□□ -0.26
RERE-209ENST00000467350 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
RERE-209ENST00000467350 ANKRD13DQ6ZTN6 518 aa13.45□□□□□ -0.26
RERE-209ENST00000467350 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
RERE-209ENST00000467350 XAGE3Q8WTP9 111 aa13.45□□□□□ -0.26
RERE-209ENST00000467350 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
RERE-209ENST00000467350 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
RERE-209ENST00000467350 UBN2Q6ZU65 1347 aa13.44□□□□□ -0.26
RERE-209ENST00000467350 POTECB2RU33 542 aa13.44□□□□□ -0.26
RERE-209ENST00000467350 NTSR2O95665 410 aa13.44□□□□□ -0.26
RERE-209ENST00000467350 EIF6P56537 245 aaKnown RBP13.44□□□□□ -0.26
RERE-209ENST00000467350 PNMA8AQ86V59 439 aaPredicted RBP13.44□□□□□ -0.26
RERE-209ENST00000467350 KLRG1Q96E93 195 aa13.44□□□□□ -0.26
RERE-209ENST00000467350 L3MBTL3Q96JM7 780 aaPredicted RBP13.44□□□□□ -0.26
RERE-209ENST00000467350 VPS33BQ9H267 617 aa13.44□□□□□ -0.26
RERE-209ENST00000467350 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
RERE-209ENST00000467350 KDM3BQ7LBC6 1761 aa13.43□□□□□ -0.26
RERE-209ENST00000467350 FZD9O00144 591 aa13.43□□□□□ -0.26
RERE-209ENST00000467350 APAF1O14727 1248 aa13.43□□□□□ -0.26
RERE-209ENST00000467350 PPEF1O14829 653 aaPredicted RBP13.43□□□□□ -0.26
RERE-209ENST00000467350 ANXA1P04083 346 aa13.43□□□□□ -0.26
RERE-209ENST00000467350 GNAI1P63096 354 aa13.43□□□□□ -0.26
RERE-209ENST00000467350 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
RERE-209ENST00000467350 PROSER3Q2NL68 480 aa13.43□□□□□ -0.26
RERE-209ENST00000467350 GPC2Q8N158 579 aa13.43□□□□□ -0.26
RERE-209ENST00000467350 SUPT20HQ8NEM7 779 aa13.43□□□□□ -0.26
RERE-209ENST00000467350 PLBD2Q8NHP8 589 aa13.43□□□□□ -0.26
RERE-209ENST00000467350 SH3TC1Q8TE82 1336 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 RIC1Q4ADV7 1423 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 HSP90B1P14625 803 aaKnown RBP13.42□□□□□ -0.26
RERE-209ENST00000467350 DUSP27Q5VZP5 1158 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 OLFM4Q6UX06 510 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 DDX46Q7L014 1031 aaKnown RBP13.42□□□□□ -0.26
RERE-209ENST00000467350 NLRP10Q86W26 655 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 LDHDQ86WU2 507 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 LARGE2Q8N3Y3 721 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 HACL1Q9UJ83 578 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 ATP6V0A2Q9Y487 856 aa13.42□□□□□ -0.26
RERE-209ENST00000467350 TCERG1O14776 1098 aaKnown RBP13.41□□□□□ -0.26
RERE-209ENST00000467350 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
RERE-209ENST00000467350 TAF1DQ9H5J8 278 aaPredicted RBP13.41□□□□□ -0.26
RERE-209ENST00000467350 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
RERE-209ENST00000467350 ABCC12Q96J65 1359 aa13.41□□□□□ -0.26
RERE-209ENST00000467350 LMOD1P29536 600 aaPredicted RBP13.4□□□□□ -0.26
RERE-209ENST00000467350 HTRA3P83110 453 aa13.4□□□□□ -0.26
RERE-209ENST00000467350 KRT24Q2M2I5 525 aa13.4□□□□□ -0.26
RERE-209ENST00000467350 SP8Q8IXZ3 490 aa13.4□□□□□ -0.26
RERE-209ENST00000467350 JMYQ8N9B5 988 aa13.4□□□□□ -0.26
RERE-209ENST00000467350 MBIPQ9NS73 344 aa13.4□□□□□ -0.26
RERE-209ENST00000467350 ZNF853P0CG23 659 aa13.39□□□□□ -0.27
RERE-209ENST00000467350 HCLS1P14317 486 aaPredicted RBP13.39□□□□□ -0.27
RERE-209ENST00000467350 EPHX2P34913 555 aa13.39□□□□□ -0.27
RERE-209ENST00000467350 TRIM28Q13263 835 aaKnown RBP13.39□□□□□ -0.27
RERE-209ENST00000467350 EAPPQ56P03 285 aaPredicted RBP13.39□□□□□ -0.27
RERE-209ENST00000467350 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
RERE-209ENST00000467350 RIC3Q7Z5B4 369 aa13.39□□□□□ -0.27
RERE-209ENST00000467350 NIM1KQ8IY84 436 aa13.39□□□□□ -0.27
RERE-209ENST00000467350 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
RERE-209ENST00000467350 DLEC1Q9Y238 1755 aa13.38□□□□□ -0.27
RERE-209ENST00000467350 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
RERE-209ENST00000467350 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
RERE-209ENST00000467350 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
RERE-209ENST00000467350 DPP8Q6V1X1 898 aaPredicted RBP13.38□□□□□ -0.27
RERE-209ENST00000467350 MPNDQ8N594 471 aa13.38□□□□□ -0.27
RERE-209ENST00000467350 GJA3Q9Y6H8 435 aa13.38□□□□□ -0.27
RERE-209ENST00000467350 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
RERE-209ENST00000467350 PPIP5K2O43314 1243 aa13.37□□□□□ -0.27
RERE-209ENST00000467350 GRAPQ13588 217 aa13.37□□□□□ -0.27
RERE-209ENST00000467350 C3orf67Q6ZVT6 689 aa13.37□□□□□ -0.27
RERE-209ENST00000467350 GRAPLQ8TC17 118 aaPredicted RBP13.37□□□□□ -0.27
RERE-209ENST00000467350 ISCA1Q9BUE6 129 aa13.37□□□□□ -0.27
RERE-209ENST00000467350 MRS2Q9HD23 443 aa13.37□□□□□ -0.27
RERE-209ENST00000467350 BCORQ6W2J9 1755 aa13.37□□□□□ -0.27
RERE-209ENST00000467350 ZNF541Q9H0D2 1346 aa13.37□□□□□ -0.27
RERE-209ENST00000467350 ANKRD31Q8N7Z5 1873 aa13.36□□□□□ -0.27
RERE-209ENST00000467350 FAM89AQ96GI7 184 aa13.36□□□□□ -0.27
RERE-209ENST00000467350 RTFDC1Q9BY42 306 aaPredicted RBP13.36□□□□□ -0.27
RERE-209ENST00000467350 ZNRF3Q9ULT6 936 aa13.36□□□□□ -0.27
RERE-209ENST00000467350 TNRC6CQ9HCJ0 1690 aaKnown RBP13.36□□□□□ -0.27
RERE-209ENST00000467350 ABCC4O15439 1325 aa13.36□□□□□ -0.27
RERE-209ENST00000467350 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
RERE-209ENST00000467350 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
RERE-209ENST00000467350 ATP5J2-PTCD1G3V325 749 aa13.35□□□□□ -0.27
RERE-209ENST00000467350 TNIP1Q15025 636 aa13.35□□□□□ -0.27
RERE-209ENST00000467350 SF3B3Q15393 1217 aaKnown RBP13.35□□□□□ -0.27
RERE-209ENST00000467350 CCDC27Q2M243 656 aa13.35□□□□□ -0.27
RERE-209ENST00000467350 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
RERE-209ENST00000467350 ZBTB38Q8NAP3 1195 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms