RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 USP17L17D6RBQ6 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L19D6RCP7 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L20D6RJB6 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 IGFBP4P22692 258 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 USP17L24Q0WX57 530 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 RTN1Q16799 776 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 CD163Q86VB7 1156 aa8.65□□□□□ -1.02
CHMP2B-202ENST00000466696 M0R082 166 aa8.64□□□□□ -1.03
CHMP2B-202ENST00000466696 SPATA31C1P0DKV0 1188 aa8.64□□□□□ -1.03
CHMP2B-202ENST00000466696 ADH7P40394 386 aa8.64□□□□□ -1.03
CHMP2B-202ENST00000466696 IER5Q5VY09 327 aa8.64□□□□□ -1.03
CHMP2B-202ENST00000466696 RAB44Q7Z6P3 723 aaPredicted RBP8.64□□□□□ -1.03
CHMP2B-202ENST00000466696 ZNF417Q8TAU3 575 aa8.64□□□□□ -1.03
CHMP2B-202ENST00000466696 ZNF587Q96SQ5 575 aaPredicted RBP8.64□□□□□ -1.03
CHMP2B-202ENST00000466696 EFCC1Q9HA90 598 aa8.64□□□□□ -1.03
CHMP2B-202ENST00000466696 PRDM6Q9NQX0 595 aa8.64□□□□□ -1.03
CHMP2B-202ENST00000466696 K7ELQ4 463 aaPredicted RBP8.63□□□□□ -1.03
CHMP2B-202ENST00000466696 CHRNA4P43681 627 aa8.62□□□□□ -1.03
CHMP2B-202ENST00000466696 PRRT3Q5FWE3 981 aa8.62□□□□□ -1.03
CHMP2B-202ENST00000466696 BHMTQ93088 406 aa8.62□□□□□ -1.03
CHMP2B-202ENST00000466696 STARD13Q9Y3M8 1113 aa8.62□□□□□ -1.03
CHMP2B-202ENST00000466696 TGFBR3LH3BV60 316 aa8.61□□□□□ -1.03
CHMP2B-202ENST00000466696 MICALL1Q8N3F8 863 aa8.61□□□□□ -1.03
CHMP2B-202ENST00000466696 LGR5O75473 907 aa8.6□□□□□ -1.03
CHMP2B-202ENST00000466696 ALBP02768 609 aa8.6□□□□□ -1.03
CHMP2B-202ENST00000466696 ARXQ96QS3 562 aa8.6□□□□□ -1.03
CHMP2B-202ENST00000466696 FURINP09958 794 aa8.59□□□□□ -1.03
CHMP2B-202ENST00000466696 EPB42P16452 691 aa8.59□□□□□ -1.03
CHMP2B-202ENST00000466696 CFAP70Q5T0N1 1121 aa8.59□□□□□ -1.03
CHMP2B-202ENST00000466696 UBE2OQ9C0C9 1292 aaKnown RBP8.59□□□□□ -1.03
CHMP2B-202ENST00000466696 ZNF777Q9ULD5 760 aaPredicted RBP8.59□□□□□ -1.03
CHMP2B-202ENST00000466696 FOXO3O43524 673 aa8.58□□□□□ -1.04
CHMP2B-202ENST00000466696 WEE1P30291 646 aa8.58□□□□□ -1.04
CHMP2B-202ENST00000466696 COL9A3Q14050 684 aaPredicted RBP8.58□□□□□ -1.04
CHMP2B-202ENST00000466696 FAM200AQ8TCP9 573 aa8.58□□□□□ -1.04
CHMP2B-202ENST00000466696 VTI1AQ96AJ9 217 aa8.58□□□□□ -1.04
CHMP2B-202ENST00000466696 PNMA5Q96PV4 448 aa8.58□□□□□ -1.04
CHMP2B-202ENST00000466696 GSX2Q9BZM3 304 aa8.58□□□□□ -1.04
CHMP2B-202ENST00000466696 DMGDHQ9UI17 866 aaKnown RBP8.58□□□□□ -1.04
CHMP2B-202ENST00000466696 LILRB5O75023 590 aa8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 APBA3O96018 575 aa8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 GATA4P43694 442 aa8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 TBC1D8BQ0IIM8 1120 aa8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 TRIM28Q13263 835 aaKnown RBP8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 CCINQ13939 588 aa8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 C20orf204Q6ZNR8 217 aa8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 C8orf86Q6ZUL3 223 aa8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 BCS1LQ9Y276 419 aa8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.57□□□□□ -1.04
CHMP2B-202ENST00000466696 NID1P14543 1247 aa8.56□□□□□ -1.04
CHMP2B-202ENST00000466696 RFX1P22670 979 aa8.56□□□□□ -1.04
CHMP2B-202ENST00000466696 IGFLR1Q9H665 355 aa8.56□□□□□ -1.04
CHMP2B-202ENST00000466696 SLC6A14Q9UN76 642 aa8.56□□□□□ -1.04
CHMP2B-202ENST00000466696 NACC1Q96RE7 527 aa8.55□□□□□ -1.04
CHMP2B-202ENST00000466696 KLK14Q9P0G3 267 aa8.55□□□□□ -1.04
CHMP2B-202ENST00000466696 NFKB1P19838 968 aa8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 INPP5BP32019 993 aa8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 IDH3AP50213 366 aa8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 DGKZQ13574 1117 aa8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 PCSK7Q16549 785 aa8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 C11orf91Q3C1V1 193 aa8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 TRAPPC3LQ5T215 181 aa8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 MYO19Q96H55 970 aa8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 QTRT2Q9H974 415 aaKnown RBP8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 C11orf16Q9NQ32 467 aa8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 DNAJB12Q9NXW2 375 aaKnown RBP8.54□□□□□ -1.04
CHMP2B-202ENST00000466696 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
CHMP2B-202ENST00000466696 ARSDP51689 593 aa8.53□□□□□ -1.04
CHMP2B-202ENST00000466696 CDCA8Q53HL2 280 aa8.53□□□□□ -1.04
CHMP2B-202ENST00000466696 JPH1Q9HDC5 661 aaPredicted RBP8.53□□□□□ -1.04
CHMP2B-202ENST00000466696 MAP3K6O95382 1288 aa8.52□□□□□ -1.05
CHMP2B-202ENST00000466696 DOC2BQ14184 412 aa8.52□□□□□ -1.05
CHMP2B-202ENST00000466696 NOVA2Q9UNW9 492 aaKnown RBP8.52□□□□□ -1.05
CHMP2B-202ENST00000466696 MICAL2O94851 1124 aa8.51□□□□□ -1.05
CHMP2B-202ENST00000466696 SWI5Q1ZZU3 235 aa8.51□□□□□ -1.05
CHMP2B-202ENST00000466696 PSAPL1Q6NUJ1 521 aa8.51□□□□□ -1.05
CHMP2B-202ENST00000466696 NUDT8Q8WV74 236 aa8.51□□□□□ -1.05
CHMP2B-202ENST00000466696 RGS9O75916 674 aaPredicted RBP8.5□□□□□ -1.05
CHMP2B-202ENST00000466696 GRNP28799 593 aaKnown RBP8.5□□□□□ -1.05
CHMP2B-202ENST00000466696 ACIN1Q9UKV3 1341 aaKnown RBP8.5□□□□□ -1.05
CHMP2B-202ENST00000466696 A0A0A0MRY4 1105 aa8.49□□□□□ -1.05
CHMP2B-202ENST00000466696 AFF1P51825 1210 aaKnown RBP8.49□□□□□ -1.05
CHMP2B-202ENST00000466696 RAC1P63000 192 aa8.49□□□□□ -1.05
CHMP2B-202ENST00000466696 GRIK4Q16099 956 aa8.49□□□□□ -1.05
CHMP2B-202ENST00000466696 FAM35AQ86V20 835 aa8.49□□□□□ -1.05
CHMP2B-202ENST00000466696 IFT43Q96FT9 208 aa8.49□□□□□ -1.05
CHMP2B-202ENST00000466696 C9orf172C9J069 976 aa8.48□□□□□ -1.05
CHMP2B-202ENST00000466696 ELNP15502 786 aa8.48□□□□□ -1.05
CHMP2B-202ENST00000466696 ARID4AP29374 1257 aaPredicted RBP8.48□□□□□ -1.05
CHMP2B-202ENST00000466696 ELOAQ14241 798 aaKnown RBP8.48□□□□□ -1.05
CHMP2B-202ENST00000466696 DHX32Q7L7V1 743 aaKnown RBP8.48□□□□□ -1.05
CHMP2B-202ENST00000466696 SEMA6BQ9H3T3 888 aa8.48□□□□□ -1.05
CHMP2B-202ENST00000466696 NAGPAQ9UK23 515 aa8.48□□□□□ -1.05
CHMP2B-202ENST00000466696 TARSP26639 723 aaKnown RBP8.47□□□□□ -1.05
CHMP2B-202ENST00000466696 FKBP5Q13451 457 aaPredicted RBP8.47□□□□□ -1.05
CHMP2B-202ENST00000466696 KRT25Q7Z3Z0 450 aa8.47□□□□□ -1.05
CHMP2B-202ENST00000466696 TRPM4Q8TD43 1214 aa8.47□□□□□ -1.05
CHMP2B-202ENST00000466696 FRRS1LQ9P0K9 344 aa8.47□□□□□ -1.05
CHMP2B-202ENST00000466696 ZFATQ9P243 1243 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms