RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, human

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCCAG3-208	ENST00000466579		H0YIN7	160 aa		12.17	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	SLC4A2	P04920	1241 aa		12.17	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	SRGN	P10124	158 aa		12.17	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	CRY2	Q49AN0	593 aa		12.17	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	ZNF428	Q96B54	188 aa		12.17	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	CDCA7L	Q96GN5	454 aa		12.17	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	DDX58	O95786	925 aa	Known RBP	12.16	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	ERFE	Q4G0M1	354 aa		12.16	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	DALRD3	Q5D0E6	543 aa	Known RBP	12.16	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	STYK1	Q6J9G0	422 aa		12.16	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	KSR2	Q6VAB6	950 aa		12.16	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	G2E3	Q7L622	706 aa		12.16	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	CCDC24	Q8N4L8	307 aa		12.16	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	METTL22	Q9BUU2	404 aa	Predicted RBP	12.16	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	UTP14A	Q9BVJ6	771 aa	Known RBP	12.16	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	LAMB2	P55268	1798 aa		12.15	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	TCERG1	O14776	1098 aa	Known RBP	12.15	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	CT47B1	P0C2W7	299 aa	Predicted RBP	12.15	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	FLII	Q13045	1269 aa		12.15	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	RIC3	Q7Z5B4	369 aa		12.15	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	NUTM1	Q86Y26	1132 aa		12.15	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	TTLL6	Q8N841	843 aa		12.15	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	MASTL	Q96GX5	879 aa		12.15	□□□□□ -0.46
SDCCAG3-208	ENST00000466579	DDX60	Q8IY21	1712 aa	Known RBP	12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	SLX4	Q8IY92	1834 aa		12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	PI4KAP2	A4QPH2	592 aa		12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	FAM177B	A6PVY3	158 aa		12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	NPHP1	O15259	732 aa		12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	NPR1	P16066	1061 aa		12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	HOXA10	P31260	410 aa	Predicted RBP	12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	PELP1	Q8IZL8	1130 aa	Known RBP	12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	PI4KAP1	Q8N8J0	262 aa		12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	CCDC191	Q8NCU4	936 aa		12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	CNKSR1	Q969H4	720 aa		12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	BCS1L	Q9Y276	419 aa		12.14	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	SH3TC1	Q8TE82	1336 aa		12.13	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	ATP5J2-PTCD1	G3V325	749 aa		12.13	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	GTF2E1	P29083	439 aa	Predicted RBP	12.13	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	MAP3K2	Q9Y2U5	619 aa		12.13	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	ZBED9	Q6R2W3	1325 aa		12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	FER1L6	Q2WGJ9	1857 aa		12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	IGKV5-2	P06315	115 aa		12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	BRPF1	P55201	1214 aa	Predicted RBP	12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	ALDH1L2	Q3SY69	923 aa		12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	C3orf67	Q6ZVT6	689 aa		12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	MRPL50	Q8N5N7	158 aa	Known RBP	12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	C7orf43	Q8WVR3	580 aa		12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	MYD88	Q99836	296 aa		12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	TRMT112	Q9UI30	125 aa	Known RBP	12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	WWC3	Q9ULE0	1092 aa		12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	SBF1	O95248	1867 aa		12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	CACNA1S	Q13698	1873 aa		12.12	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	FKBP5	Q13451	457 aa	Predicted RBP	12.11	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	SYNE4	Q8N205	404 aa		12.11	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	SSH1	Q8WYL5	1049 aa		12.11	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.11	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	NLRP3	Q96P20	1036 aa		12.11	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	CRAMP1	Q96RY5	1269 aa		12.11	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	CWC25	Q9NXE8	425 aa	Predicted RBP	12.11	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	SNED1	Q8TER0	1413 aa		12.11	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	NEURL1B	A8MQ27	555 aa		12.1	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	PCCA	P05165	728 aa	Predicted RBP	12.1	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	ALDH1B1	P30837	517 aa		12.1	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	PRPF40B	Q6NWY9	871 aa	Known RBP	12.1	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	DNAAF4	Q8WXU2	420 aa		12.1	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	FAM89A	Q96GI7	184 aa		12.1	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	CDHR2	Q9BYE9	1310 aa		12.1	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	HCLS1	P14317	486 aa	Predicted RBP	12.09	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	NEXN	Q0ZGT2	675 aa		12.09	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	SF3B3	Q15393	1217 aa	Known RBP	12.09	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	SOGA3	Q5TF21	947 aa		12.09	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	LINS1	Q8NG48	757 aa		12.09	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	PTPRC	P08575	1304 aa		12.09	□□□□□ -0.47
SDCCAG3-208	ENST00000466579	LTBP3	Q9NS15	1303 aa		12.09	□□□□□ -0.47
SDCCAG3-208	ENST00000466579		H7C1W4	665 aa		12.08	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	IRS4	O14654	1257 aa	Predicted RBP	12.08	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	HSP90B1	P14625	803 aa	Known RBP	12.08	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	YY1	P25490	414 aa		12.08	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	CASP7	P55210	303 aa		12.08	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	BEND3	Q5T5X7	828 aa		12.08	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	ARHGAP27	Q6ZUM4	889 aa		12.08	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	RPGR	Q92834	1020 aa	Known RBP	12.08	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	RBM17	Q96I25	401 aa	Known RBP	12.08	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	MYH3	P11055	1940 aa		12.07	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	DICER1	Q9UPY3	1922 aa	Known RBP	12.07	□□□□□ -0.48
SDCCAG3-208	ENST00000466579		F6X3S4	739 aa		12.07	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	NFKBIE	O00221	500 aa		12.07	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	C21orf2	O43822	256 aa		12.07	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	GCKR	Q14397	625 aa		12.07	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	CWF19L2	Q2TBE0	894 aa	Known RBP	12.07	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	ABCC4	O15439	1325 aa		12.07	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	CCDC88A	Q3V6T2	1871 aa		12.06	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	LRRC37A	A6NMS7	1700 aa		12.06	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	PDE8A	O60658	829 aa		12.06	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	PRELP	P51888	382 aa		12.06	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	RARS	P54136	660 aa	Known RBP	12.06	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	CC2D2B	Q6DHV5	1058 aa		12.06	□□□□□ -0.48
SDCCAG3-208	ENST00000466579	PLA2G12B	Q9BX93	195 aa		12.06	□□□□□ -0.48

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