RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 FSD1Q9BTV5 496 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 SMC3Q9UQE7 1217 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 LRSAM1Q6UWE0 723 aa12.52□□□□□ -0.4
UFD1-206ENST00000466373 UBE3BQ7Z3V4 1068 aa12.52□□□□□ -0.4
UFD1-206ENST00000466373 PDRG1Q9NUG6 133 aa12.52□□□□□ -0.4
UFD1-206ENST00000466373 CNPY2Q9Y2B0 182 aa12.52□□□□□ -0.4
UFD1-206ENST00000466373 OVOS2A0A0G2JMS6 1433 aa12.52□□□□□ -0.41
UFD1-206ENST00000466373 A0A0D9SFI3 127 aa12.52□□□□□ -0.41
UFD1-206ENST00000466373 SYT1P21579 422 aa12.52□□□□□ -0.41
UFD1-206ENST00000466373 NECAB1Q8N987 351 aa12.52□□□□□ -0.41
UFD1-206ENST00000466373 PPP1R9BQ96SB3 815 aa12.52□□□□□ -0.41
UFD1-206ENST00000466373 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.41
UFD1-206ENST00000466373 TMEM94Q12767 1356 aa12.51□□□□□ -0.41
UFD1-206ENST00000466373 METTL22Q9BUU2 404 aaPredicted RBP12.51□□□□□ -0.41
UFD1-206ENST00000466373 UTYO14607 1347 aa12.51□□□□□ -0.41
UFD1-206ENST00000466373 CCDC171Q6TFL3 1326 aa12.51□□□□□ -0.41
UFD1-206ENST00000466373 ADAMTSL3P82987 1691 aa12.51□□□□□ -0.41
UFD1-206ENST00000466373 CHGBP05060 677 aa12.51□□□□□ -0.41
UFD1-206ENST00000466373 CYP46A1Q9Y6A2 500 aa12.51□□□□□ -0.41
UFD1-206ENST00000466373 TAF6LQ9Y6J9 622 aa12.51□□□□□ -0.41
UFD1-206ENST00000466373 SIPA1L3O60292 1781 aaPredicted RBP12.51□□□□□ -0.41
UFD1-206ENST00000466373 STX6O43752 255 aa12.51□□□□□ -0.41
UFD1-206ENST00000466373 C5P01031 1676 aa12.5□□□□□ -0.41
UFD1-206ENST00000466373 FIBPO43427 364 aa12.5□□□□□ -0.41
UFD1-206ENST00000466373 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
UFD1-206ENST00000466373 ZSCAN22P10073 491 aaPredicted RBP12.5□□□□□ -0.41
UFD1-206ENST00000466373 ZKSCAN1P17029 563 aaPredicted RBP12.5□□□□□ -0.41
UFD1-206ENST00000466373 NECTIN1Q15223 517 aa12.5□□□□□ -0.41
UFD1-206ENST00000466373 CREB3L3Q68CJ9 461 aa12.5□□□□□ -0.41
UFD1-206ENST00000466373 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.5□□□□□ -0.41
UFD1-206ENST00000466373 GJB2P29033 226 aa12.5□□□□□ -0.41
UFD1-206ENST00000466373 CABP4P57796 275 aa12.5□□□□□ -0.41
UFD1-206ENST00000466373 CHMP3Q9Y3E7 222 aa12.5□□□□□ -0.41
UFD1-206ENST00000466373 TFCP2Q12800 502 aa12.49□□□□□ -0.41
UFD1-206ENST00000466373 ME3Q16798 604 aa12.49□□□□□ -0.41
UFD1-206ENST00000466373 ZNF589Q86UQ0 364 aaPredicted RBP12.49□□□□□ -0.41
UFD1-206ENST00000466373 ZSWIM6Q9HCJ5 1215 aa12.49□□□□□ -0.41
UFD1-206ENST00000466373 A0A087WZG4 1122 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 VPS37CA5D8V6 355 aaPredicted RBP12.48□□□□□ -0.41
UFD1-206ENST00000466373 DCAF5Q96JK2 942 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 FMNL2Q96PY5 1086 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 VPS53Q5VIR6 699 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 LRP10Q7Z4F1 713 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 MAP4K1Q92918 833 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 DBNLQ9UJU6 430 aaKnown RBP12.48□□□□□ -0.41
UFD1-206ENST00000466373 TPCN1Q9ULQ1 816 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 CRYBG1Q9Y4K1 1723 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 SLC27A2O14975 620 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 MST1RQ04912 1400 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 DNAJC2Q99543 621 aaKnown RBP12.48□□□□□ -0.41
UFD1-206ENST00000466373 CAMTA1Q9Y6Y1 1673 aa12.48□□□□□ -0.41
UFD1-206ENST00000466373 SCN11AQ9UI33 1791 aa12.47□□□□□ -0.41
UFD1-206ENST00000466373 F13A1P00488 732 aa12.47□□□□□ -0.41
UFD1-206ENST00000466373 PTPN12Q05209 780 aaKnown RBP12.47□□□□□ -0.41
UFD1-206ENST00000466373 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
UFD1-206ENST00000466373 DNM1Q05193 864 aaKnown RBP12.47□□□□□ -0.41
UFD1-206ENST00000466373 ZSCAN30Q86W11 494 aa12.47□□□□□ -0.41
UFD1-206ENST00000466373 MSNP26038 577 aaKnown RBP12.46□□□□□ -0.41
UFD1-206ENST00000466373 STK3Q13188 491 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 SYAP1Q96A49 352 aaPredicted RBP12.46□□□□□ -0.41
UFD1-206ENST00000466373 TSPY26PQ9H489 355 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 ALS2Q96Q42 1657 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 HIP1O00291 1037 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 HSPA2P54652 639 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 TNNI3KQ59H18 835 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 CCDC129Q6ZRS4 1044 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 FERMT3Q86UX7 667 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 MPNDQ8N594 471 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 SEC62Q99442 399 aaKnown RBP12.46□□□□□ -0.41
UFD1-206ENST00000466373 DBNDD2Q9BQY9 259 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 FPGT-TNNI3KV9GXZ4 949 aa12.46□□□□□ -0.41
UFD1-206ENST00000466373 RFX5P48382 616 aaPredicted RBP12.46□□□□□ -0.42
UFD1-206ENST00000466373 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.42
UFD1-206ENST00000466373 TM6SF1Q9BZW5 370 aa12.46□□□□□ -0.42
UFD1-206ENST00000466373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.42
UFD1-206ENST00000466373 KIF1AQ12756 1690 aa12.45□□□□□ -0.42
UFD1-206ENST00000466373 DDX46Q7L014 1031 aaKnown RBP12.45□□□□□ -0.42
UFD1-206ENST00000466373 COPRSQ9NQ92 184 aa12.45□□□□□ -0.42
UFD1-206ENST00000466373 MTMR6Q9Y217 621 aa12.45□□□□□ -0.42
UFD1-206ENST00000466373 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
UFD1-206ENST00000466373 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
UFD1-206ENST00000466373 FAM173BQ6P4H8 233 aa12.45□□□□□ -0.42
UFD1-206ENST00000466373 BLOC1S2Q6QNY1 142 aa12.45□□□□□ -0.42
UFD1-206ENST00000466373 TTLL7Q6ZT98 887 aa12.45□□□□□ -0.42
UFD1-206ENST00000466373 KCNB2Q92953 911 aa12.45□□□□□ -0.42
UFD1-206ENST00000466373 NBPF26B4DH59 902 aa12.44□□□□□ -0.42
UFD1-206ENST00000466373 NBPF14Q5TI25 921 aa12.44□□□□□ -0.42
UFD1-206ENST00000466373 NBPF10Q6P3W6 841 aaKnown RBP12.44□□□□□ -0.42
UFD1-206ENST00000466373 NBPF15Q8N660 670 aa12.44□□□□□ -0.42
UFD1-206ENST00000466373 PDLIM2Q96JY6 352 aa12.44□□□□□ -0.42
UFD1-206ENST00000466373 ZSCAN31Q96LW9 406 aaPredicted RBP12.44□□□□□ -0.42
UFD1-206ENST00000466373 NEUROD6Q96NK8 337 aa12.44□□□□□ -0.42
UFD1-206ENST00000466373 ZNF330Q9Y3S2 320 aaPredicted RBP12.44□□□□□ -0.42
UFD1-206ENST00000466373 A1BGP04217 495 aa12.44□□□□□ -0.42
UFD1-206ENST00000466373 TOM1L2Q6ZVM7 507 aa12.44□□□□□ -0.42
UFD1-206ENST00000466373 ZBTB3Q9H5J0 574 aa12.44□□□□□ -0.42
UFD1-206ENST00000466373 SH2B1Q9NRF2 756 aaPredicted RBP12.44□□□□□ -0.42
UFD1-206ENST00000466373 RNF20Q5VTR2 975 aa12.43□□□□□ -0.42
UFD1-206ENST00000466373 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
UFD1-206ENST00000466373 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms