RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 PDE6BP35913 854 aa12.56□□□□□ -0.4
RTFDC1-205ENST00000466260 TWISTNBQ3B726 338 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-205ENST00000466260 SUSD4Q5VX71 490 aa12.56□□□□□ -0.4
RTFDC1-205ENST00000466260 TPTE2Q6XPS3 522 aa12.56□□□□□ -0.4
RTFDC1-205ENST00000466260 MIER1Q8N108 512 aa12.56□□□□□ -0.4
RTFDC1-205ENST00000466260 IL16Q14005 1332 aa12.56□□□□□ -0.4
RTFDC1-205ENST00000466260 CACNA1FO60840 1977 aa12.56□□□□□ -0.4
RTFDC1-205ENST00000466260 DDX60Q8IY21 1712 aaKnown RBP12.55□□□□□ -0.4
RTFDC1-205ENST00000466260 EXOSC9Q06265 439 aaKnown RBP12.55□□□□□ -0.4
RTFDC1-205ENST00000466260 ERFEQ4G0M1 354 aa12.55□□□□□ -0.4
RTFDC1-205ENST00000466260 WDR63Q8IWG1 891 aa12.55□□□□□ -0.4
RTFDC1-205ENST00000466260 BRIP1Q9BX63 1249 aa12.55□□□□□ -0.4
RTFDC1-205ENST00000466260 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
RTFDC1-205ENST00000466260 TIAM2Q8IVF5 1701 aa12.54□□□□□ -0.4
RTFDC1-205ENST00000466260 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
RTFDC1-205ENST00000466260 CCDC30Q5VVM6 783 aa12.54□□□□□ -0.4
RTFDC1-205ENST00000466260 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
RTFDC1-205ENST00000466260 TTLL6Q8N841 843 aa12.54□□□□□ -0.4
RTFDC1-205ENST00000466260 NYXQ9GZU5 481 aa12.54□□□□□ -0.4
RTFDC1-205ENST00000466260 TAF1P21675 1872 aa12.54□□□□□ -0.4
RTFDC1-205ENST00000466260 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 ATP5J2-PTCD1G3V325 749 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 RGL2O15211 777 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 NTSR2O95665 410 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 RASSF7Q02833 373 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 HSP90AB3PQ58FF7 597 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 PPP1R42Q7Z4L9 355 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 ZNF34Q8IZ26 560 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 PLBD2Q8NHP8 589 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 ZNF526Q8TF50 670 aaPredicted RBP12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 STK31Q9BXU1 1019 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
RTFDC1-205ENST00000466260 C21orf2O43822 256 aa12.52□□□□□ -0.41
RTFDC1-205ENST00000466260 PARP10Q53GL7 1025 aa12.52□□□□□ -0.41
RTFDC1-205ENST00000466260 RTL5Q5HYW3 569 aaPredicted RBP12.52□□□□□ -0.41
RTFDC1-205ENST00000466260 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.41
RTFDC1-205ENST00000466260 SRGNP10124 158 aa12.51□□□□□ -0.41
RTFDC1-205ENST00000466260 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
RTFDC1-205ENST00000466260 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
RTFDC1-205ENST00000466260 MASTLQ96GX5 879 aa12.51□□□□□ -0.41
RTFDC1-205ENST00000466260 MYD88Q99836 296 aa12.51□□□□□ -0.41
RTFDC1-205ENST00000466260 UTP14AQ9BVJ6 771 aaKnown RBP12.51□□□□□ -0.41
RTFDC1-205ENST00000466260 IBTKQ9P2D0 1353 aaPredicted RBP12.51□□□□□ -0.41
RTFDC1-205ENST00000466260 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
RTFDC1-205ENST00000466260 STYK1Q6J9G0 422 aa12.5□□□□□ -0.41
RTFDC1-205ENST00000466260 PRPF40BQ6NWY9 871 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-205ENST00000466260 G2E3Q7L622 706 aa12.5□□□□□ -0.41
RTFDC1-205ENST00000466260 SYNE4Q8N205 404 aa12.5□□□□□ -0.41
RTFDC1-205ENST00000466260 ZNF784Q8NCA9 323 aaPredicted RBP12.5□□□□□ -0.41
RTFDC1-205ENST00000466260 TRMT112Q9UI30 125 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-205ENST00000466260 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
RTFDC1-205ENST00000466260 DICER1Q9UPY3 1922 aaKnown RBP12.5□□□□□ -0.41
RTFDC1-205ENST00000466260 MYH3P11055 1940 aa12.49□□□□□ -0.41
RTFDC1-205ENST00000466260 ZNF521Q96K83 1311 aa12.49□□□□□ -0.41
RTFDC1-205ENST00000466260 DDX58O95786 925 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-205ENST00000466260 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
RTFDC1-205ENST00000466260 NPR1P16066 1061 aa12.49□□□□□ -0.41
RTFDC1-205ENST00000466260 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
RTFDC1-205ENST00000466260 RPGRQ92834 1020 aaKnown RBP12.49□□□□□ -0.41
RTFDC1-205ENST00000466260 CNKSR1Q969H4 720 aa12.49□□□□□ -0.41
RTFDC1-205ENST00000466260 RNF181Q9P0P0 153 aa12.49□□□□□ -0.41
RTFDC1-205ENST00000466260 MAP3K2Q9Y2U5 619 aa12.49□□□□□ -0.41
RTFDC1-205ENST00000466260 VAMP4O75379 141 aa12.48□□□□□ -0.41
RTFDC1-205ENST00000466260 C9orf131Q5VYM1 1079 aa12.48□□□□□ -0.41
RTFDC1-205ENST00000466260 OLFM4Q6UX06 510 aa12.48□□□□□ -0.41
RTFDC1-205ENST00000466260 JARID2Q92833 1246 aaPredicted RBP12.48□□□□□ -0.41
RTFDC1-205ENST00000466260 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
RTFDC1-205ENST00000466260 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
RTFDC1-205ENST00000466260 CHMP4AQ9BY43 222 aa12.48□□□□□ -0.41
RTFDC1-205ENST00000466260 SH3TC1Q8TE82 1336 aa12.47□□□□□ -0.41
RTFDC1-205ENST00000466260 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
RTFDC1-205ENST00000466260 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
RTFDC1-205ENST00000466260 SLC51AQ86UW1 340 aa12.47□□□□□ -0.41
RTFDC1-205ENST00000466260 PI4KAP1Q8N8J0 262 aa12.47□□□□□ -0.41
RTFDC1-205ENST00000466260 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
RTFDC1-205ENST00000466260 ISCA1Q9BUE6 129 aa12.47□□□□□ -0.41
RTFDC1-205ENST00000466260 RIC1Q4ADV7 1423 aa12.46□□□□□ -0.41
RTFDC1-205ENST00000466260 ADCY9O60503 1353 aa12.46□□□□□ -0.41
RTFDC1-205ENST00000466260 NFKBIEO00221 500 aa12.46□□□□□ -0.41
RTFDC1-205ENST00000466260 FLIIQ13045 1269 aa12.46□□□□□ -0.41
RTFDC1-205ENST00000466260 RBM17Q96I25 401 aaKnown RBP12.46□□□□□ -0.41
RTFDC1-205ENST00000466260 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
RTFDC1-205ENST00000466260 E9PSI1 815 aa12.45□□□□□ -0.42
RTFDC1-205ENST00000466260 ALDH1B1P30837 517 aa12.45□□□□□ -0.42
RTFDC1-205ENST00000466260 HNRNPUQ00839 825 aaKnown RBP eCLIP12.45□□□□□ -0.42
RTFDC1-205ENST00000466260 KSR2Q6VAB6 950 aa12.45□□□□□ -0.42
RTFDC1-205ENST00000466260 METTL22Q9BUU2 404 aaPredicted RBP12.45□□□□□ -0.42
RTFDC1-205ENST00000466260 COL4A1P02462 1669 aa12.45□□□□□ -0.42
RTFDC1-205ENST00000466260 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 KLRG2A4D1S0 409 aaPredicted RBP12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 PPEF1O14829 653 aaPredicted RBP12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 PRELPP51888 382 aa12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 SLFN5Q08AF3 891 aa12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 NEXNQ0ZGT2 675 aa12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 CWF19L2Q2TBE0 894 aaKnown RBP12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 CRY2Q49AN0 593 aa12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 CCDC93Q567U6 631 aa12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 CCDC85AQ96PX6 553 aaPredicted RBP12.44□□□□□ -0.42
RTFDC1-205ENST00000466260 BCL2L13Q9BXK5 485 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms