RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 LZTS3O60299 673 aaPredicted RBP9.01□□□□□ -0.97
LRCH3-211ENST00000466054 IREB2P48200 963 aaKnown RBP9.01□□□□□ -0.97
LRCH3-211ENST00000466054 AFF1P51825 1210 aaKnown RBP9.01□□□□□ -0.97
LRCH3-211ENST00000466054 PSMA6P60900 246 aaKnown RBP9.01□□□□□ -0.97
LRCH3-211ENST00000466054 TYRO3Q06418 890 aa9.01□□□□□ -0.97
LRCH3-211ENST00000466054 SH3PXD2AQ5TCZ1 1133 aa9.01□□□□□ -0.97
LRCH3-211ENST00000466054 WFDC12Q8WWY7 111 aa9.01□□□□□ -0.97
LRCH3-211ENST00000466054 HCN4Q9Y3Q4 1203 aa9.01□□□□□ -0.97
LRCH3-211ENST00000466054 PIK3CDO00329 1044 aa9□□□□□ -0.97
LRCH3-211ENST00000466054 SSBP4Q9BWG4 385 aaPredicted RBP9□□□□□ -0.97
LRCH3-211ENST00000466054 PHACTR1Q9C0D0 580 aa9□□□□□ -0.97
LRCH3-211ENST00000466054 DNAJB12Q9NXW2 375 aaKnown RBP9□□□□□ -0.97
LRCH3-211ENST00000466054 YBX3P16989 372 aaKnown RBP eCLIP8.99□□□□□ -0.97
LRCH3-211ENST00000466054 EPHA4P54764 986 aa8.99□□□□□ -0.97
LRCH3-211ENST00000466054 SUSD3Q96L08 255 aa8.99□□□□□ -0.97
LRCH3-211ENST00000466054 EFCC1Q9HA90 598 aa8.99□□□□□ -0.97
LRCH3-211ENST00000466054 NCOA4Q13772 614 aa8.98□□□□□ -0.97
LRCH3-211ENST00000466054 DTWD1Q8N5C7 304 aa8.98□□□□□ -0.97
LRCH3-211ENST00000466054 C7orf43Q8WVR3 580 aa8.98□□□□□ -0.97
LRCH3-211ENST00000466054 SSTR4P31391 388 aa8.97□□□□□ -0.97
LRCH3-211ENST00000466054 IRAK1P51617 712 aa8.97□□□□□ -0.97
LRCH3-211ENST00000466054 HIF1AQ16665 826 aa8.97□□□□□ -0.97
LRCH3-211ENST00000466054 FAM35AQ86V20 835 aa8.97□□□□□ -0.97
LRCH3-211ENST00000466054 TRIM50Q86XT4 487 aa8.97□□□□□ -0.97
LRCH3-211ENST00000466054 ZNF280CQ8ND82 737 aa8.97□□□□□ -0.97
LRCH3-211ENST00000466054 COL17A1Q9UMD9 1497 aaPredicted RBP8.96□□□□□ -0.97
LRCH3-211ENST00000466054 PCSK7Q16549 785 aa8.96□□□□□ -0.98
LRCH3-211ENST00000466054 MSL1Q68DK7 614 aa8.96□□□□□ -0.98
LRCH3-211ENST00000466054 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.96□□□□□ -0.98
LRCH3-211ENST00000466054 NOS3P29474 1203 aa8.95□□□□□ -0.98
LRCH3-211ENST00000466054 PRR23CQ6ZRP0 262 aa8.95□□□□□ -0.98
LRCH3-211ENST00000466054 BTLAQ7Z6A9 289 aa8.95□□□□□ -0.98
LRCH3-211ENST00000466054 FBXO11Q86XK2 927 aa8.95□□□□□ -0.98
LRCH3-211ENST00000466054 WFDC8Q8IUA0 241 aa8.95□□□□□ -0.98
LRCH3-211ENST00000466054 TPCN2Q8NHX9 752 aa8.95□□□□□ -0.98
LRCH3-211ENST00000466054 TSPAN10Q9H1Z9 355 aaPredicted RBP8.95□□□□□ -0.98
LRCH3-211ENST00000466054 CPB1P15086 417 aa8.94□□□□□ -0.98
LRCH3-211ENST00000466054 NFKB1P19838 968 aa8.94□□□□□ -0.98
LRCH3-211ENST00000466054 HIRAP54198 1017 aaPredicted RBP8.94□□□□□ -0.98
LRCH3-211ENST00000466054 DEPDC4Q8N2C3 294 aa8.94□□□□□ -0.98
LRCH3-211ENST00000466054 NAGPAQ9UK23 515 aa8.94□□□□□ -0.98
LRCH3-211ENST00000466054 PPP1R12BO60237 982 aaPredicted RBP8.93□□□□□ -0.98
LRCH3-211ENST00000466054 PTCD1O75127 700 aaKnown RBP8.93□□□□□ -0.98
LRCH3-211ENST00000466054 ATP1A2P50993 1020 aa8.93□□□□□ -0.98
LRCH3-211ENST00000466054 IGF2-ASQ6U949 168 aa8.93□□□□□ -0.98
LRCH3-211ENST00000466054 SLC51AQ86UW1 340 aa8.93□□□□□ -0.98
LRCH3-211ENST00000466054 NFATC2IPQ8NCF5 419 aa8.93□□□□□ -0.98
LRCH3-211ENST00000466054 RBM19Q9Y4C8 960 aaKnown RBP8.93□□□□□ -0.98
LRCH3-211ENST00000466054 USP17L5A8MUK1 530 aa8.92□□□□□ -0.98
LRCH3-211ENST00000466054 FSTP19883 344 aa8.92□□□□□ -0.98
LRCH3-211ENST00000466054 CCINQ13939 588 aa8.92□□□□□ -0.98
LRCH3-211ENST00000466054 ELMSAN1Q6PJG2 1045 aa8.92□□□□□ -0.98
LRCH3-211ENST00000466054 ERICH6Q7L0X2 663 aa8.92□□□□□ -0.98
LRCH3-211ENST00000466054 MEGF10Q96KG7 1140 aa8.92□□□□□ -0.98
LRCH3-211ENST00000466054 CCDC102BQ68D86 513 aa8.91□□□□□ -0.98
LRCH3-211ENST00000466054 NGLY1Q96IV0 654 aa8.91□□□□□ -0.98
LRCH3-211ENST00000466054 WWC1Q8IX03 1113 aa8.9□□□□□ -0.98
LRCH3-211ENST00000466054 EPB42P16452 691 aa8.89□□□□□ -0.99
LRCH3-211ENST00000466054 ALDH16A1Q8IZ83 802 aa8.89□□□□□ -0.99
LRCH3-211ENST00000466054 GSX2Q9BZM3 304 aa8.89□□□□□ -0.99
LRCH3-211ENST00000466054 AKTIPQ9H8T0 292 aa8.89□□□□□ -0.99
LRCH3-211ENST00000466054 FRRS1LQ9P0K9 344 aa8.89□□□□□ -0.99
LRCH3-211ENST00000466054 ARID4AP29374 1257 aaPredicted RBP8.87□□□□□ -0.99
LRCH3-211ENST00000466054 FMNL2Q96PY5 1086 aa8.87□□□□□ -0.99
LRCH3-211ENST00000466054 CHMP7Q8WUX9 453 aaPredicted RBP8.86□□□□□ -0.99
LRCH3-211ENST00000466054 RNF114Q9Y508 228 aa8.86□□□□□ -0.99
LRCH3-211ENST00000466054 GSC2O15499 205 aa8.85□□□□□ -0.99
LRCH3-211ENST00000466054 TAL1P17542 331 aaPredicted RBP8.85□□□□□ -0.99
LRCH3-211ENST00000466054 CD97P48960 835 aa8.85□□□□□ -0.99
LRCH3-211ENST00000466054 MLLT1Q03111 559 aaPredicted RBP8.85□□□□□ -0.99
LRCH3-211ENST00000466054 PERM1Q5SV97 790 aa8.85□□□□□ -0.99
LRCH3-211ENST00000466054 KRT25Q7Z3Z0 450 aa8.85□□□□□ -0.99
LRCH3-211ENST00000466054 LPIN3Q9BQK8 851 aa8.85□□□□□ -0.99
LRCH3-211ENST00000466054 FLIIQ13045 1269 aa8.84□□□□□ -0.99
LRCH3-211ENST00000466054 POTEAQ6S8J7 498 aa8.84□□□□□ -0.99
LRCH3-211ENST00000466054 TSEN2Q8NCE0 465 aaKnown RBP8.84□□□□□ -0.99
LRCH3-211ENST00000466054 MRPL18Q9H0U6 180 aaKnown RBP8.84□□□□□ -0.99
LRCH3-211ENST00000466054 KIAA1024Q9UPX6 916 aa8.84□□□□□ -0.99
LRCH3-211ENST00000466054 PALM3A6NDB9 673 aaPredicted RBP8.83□□□□□ -1
LRCH3-211ENST00000466054 M0R2N6 131 aa8.83□□□□□ -1
LRCH3-211ENST00000466054 GP2P55259 537 aaKnown RBP8.83□□□□□ -1
LRCH3-211ENST00000466054 IER5Q5VY09 327 aa8.83□□□□□ -1
LRCH3-211ENST00000466054 ILDR2Q71H61 639 aa8.83□□□□□ -1
LRCH3-211ENST00000466054 DHX32Q7L7V1 743 aaKnown RBP8.83□□□□□ -1
LRCH3-211ENST00000466054 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
LRCH3-211ENST00000466054 ALG2Q9H553 416 aa8.83□□□□□ -1
LRCH3-211ENST00000466054 ALX3O95076 343 aa8.82□□□□□ -1
LRCH3-211ENST00000466054 MAP3K6O95382 1288 aa8.82□□□□□ -1
LRCH3-211ENST00000466054 EIF2AK2P19525 551 aaKnown RBP8.82□□□□□ -1
LRCH3-211ENST00000466054 DZIP1LQ8IYY4 767 aaKnown RBP8.82□□□□□ -1
LRCH3-211ENST00000466054 LARGE2Q8N3Y3 721 aa8.82□□□□□ -1
LRCH3-211ENST00000466054 SMG9Q9H0W8 520 aaKnown RBP8.82□□□□□ -1
LRCH3-211ENST00000466054 TGFBR3LH3BV60 316 aa8.81□□□□□ -1
LRCH3-211ENST00000466054 ZBTB7BO15156 539 aaPredicted RBP8.81□□□□□ -1
LRCH3-211ENST00000466054 DEAF1O75398 565 aaPredicted RBP8.81□□□□□ -1
LRCH3-211ENST00000466054 RARAP10276 462 aa8.81□□□□□ -1
LRCH3-211ENST00000466054 GLB1P16278 677 aa8.81□□□□□ -1
LRCH3-211ENST00000466054 CLDN10P78369 228 aa8.81□□□□□ -1
LRCH3-211ENST00000466054 GRIK5Q16478 980 aa8.81□□□□□ -1
LRCH3-211ENST00000466054 OGFOD1Q8N543 542 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms