RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 MRS2Q9HD23 443 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 NUDCQ9Y266 331 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 ANKRD31Q8N7Z5 1873 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 SCN4AP35499 1836 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 SLX4Q8IY92 1834 aa11.35□□□□□ -0.59
DDR1-242ENST00000465966 COL11A2P13942 1736 aaPredicted RBP11.35□□□□□ -0.59
DDR1-242ENST00000465966 CCDC88AQ3V6T2 1871 aa11.34□□□□□ -0.59
DDR1-242ENST00000465966 DICER1Q9UPY3 1922 aaKnown RBP11.33□□□□□ -0.6
DDR1-242ENST00000465966 NBPF26B4DH59 902 aa11.33□□□□□ -0.6
DDR1-242ENST00000465966 MAP2K2P36507 400 aa11.33□□□□□ -0.6
DDR1-242ENST00000465966 EPS15P42566 896 aa11.33□□□□□ -0.6
DDR1-242ENST00000465966 CRY2Q49AN0 593 aa11.33□□□□□ -0.6
DDR1-242ENST00000465966 CYP4F22Q6NT55 531 aa11.33□□□□□ -0.6
DDR1-242ENST00000465966 NBPF10Q6P3W6 841 aaKnown RBP11.33□□□□□ -0.6
DDR1-242ENST00000465966 MCM10Q7L590 875 aa11.33□□□□□ -0.6
DDR1-242ENST00000465966 NIM1KQ8IY84 436 aa11.33□□□□□ -0.6
DDR1-242ENST00000465966 NBPF15Q8N660 670 aa11.33□□□□□ -0.6
DDR1-242ENST00000465966 ERVV-1B6SEH8 477 aa11.32□□□□□ -0.6
DDR1-242ENST00000465966 CA12O43570 354 aa11.32□□□□□ -0.6
DDR1-242ENST00000465966 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
DDR1-242ENST00000465966 SCNN1DP51172 638 aa11.32□□□□□ -0.6
DDR1-242ENST00000465966 HLFQ16534 295 aa11.32□□□□□ -0.6
DDR1-242ENST00000465966 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
DDR1-242ENST00000465966 RSPH6AQ9H0K4 717 aa11.32□□□□□ -0.6
DDR1-242ENST00000465966 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
DDR1-242ENST00000465966 U2AF1L5P0DN76 240 aaPredicted RBP11.31□□□□□ -0.6
DDR1-242ENST00000465966 PPP2R1AP30153 589 aa11.31□□□□□ -0.6
DDR1-242ENST00000465966 HOXA10P31260 410 aaPredicted RBP11.31□□□□□ -0.6
DDR1-242ENST00000465966 RGS19P49795 217 aa11.31□□□□□ -0.6
DDR1-242ENST00000465966 U2AF1Q01081 240 aaKnown RBP eCLIP11.31□□□□□ -0.6
DDR1-242ENST00000465966 TAF7Q15545 349 aaPredicted RBP11.31□□□□□ -0.6
DDR1-242ENST00000465966 CST9Q5W186 159 aa11.31□□□□□ -0.6
DDR1-242ENST00000465966 KIF6Q6ZMV9 814 aa11.31□□□□□ -0.6
DDR1-242ENST00000465966 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
DDR1-242ENST00000465966 NGEFQ8N5V2 710 aa11.31□□□□□ -0.6
DDR1-242ENST00000465966 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
DDR1-242ENST00000465966 ADARB2Q9NS39 739 aaKnown RBP11.31□□□□□ -0.6
DDR1-242ENST00000465966 COL3A1P02461 1466 aaPredicted RBP11.31□□□□□ -0.6
DDR1-242ENST00000465966 TRAF5O00463 557 aa11.3□□□□□ -0.6
DDR1-242ENST00000465966 PPEF1O14829 653 aaPredicted RBP11.3□□□□□ -0.6
DDR1-242ENST00000465966 CRAMP1Q96RY5 1269 aa11.3□□□□□ -0.6
DDR1-242ENST00000465966 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
DDR1-242ENST00000465966 PCDH10Q9P2E7 1040 aa11.3□□□□□ -0.6
DDR1-242ENST00000465966 TCERG1O14776 1098 aaKnown RBP11.29□□□□□ -0.6
DDR1-242ENST00000465966 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
DDR1-242ENST00000465966 CELF2O95319 508 aaKnown RBP11.29□□□□□ -0.6
DDR1-242ENST00000465966 NEFMP07197 916 aa11.29□□□□□ -0.6
DDR1-242ENST00000465966 FMR1Q06787 632 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDR1-242ENST00000465966 DCTN1Q14203 1278 aa11.29□□□□□ -0.6
DDR1-242ENST00000465966 SUPT20HQ8NEM7 779 aa11.29□□□□□ -0.6
DDR1-242ENST00000465966 PNISRQ8TF01 805 aaKnown RBP11.29□□□□□ -0.6
DDR1-242ENST00000465966 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
DDR1-242ENST00000465966 MAP3K15Q6ZN16 1313 aa11.29□□□□□ -0.6
DDR1-242ENST00000465966 ADAMTSL1Q8N6G6 1762 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 ARFGEF2Q9Y6D5 1785 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 AOC2O75106 756 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 GPTP24298 496 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 PPP1R42Q7Z4L9 355 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 SAPCD2Q86UD0 394 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 NLRP3Q96P20 1036 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 GPRC5DQ9NZD1 345 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 TSKSQ9UJT2 592 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 ZNRF3Q9ULT6 936 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 RRP7AQ9Y3A4 280 aaKnown RBP11.28□□□□□ -0.6
DDR1-242ENST00000465966 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
DDR1-242ENST00000465966 SNED1Q8TER0 1413 aa11.27□□□□□ -0.6
DDR1-242ENST00000465966 BCORQ6W2J9 1755 aa11.27□□□□□ -0.61
DDR1-242ENST00000465966 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
DDR1-242ENST00000465966 AOC3Q16853 763 aa11.27□□□□□ -0.61
DDR1-242ENST00000465966 FAM9BQ8IZU0 186 aa11.27□□□□□ -0.61
DDR1-242ENST00000465966 BCL2L13Q9BXK5 485 aa11.27□□□□□ -0.61
DDR1-242ENST00000465966 MCOLN1Q9GZU1 580 aa11.27□□□□□ -0.61
DDR1-242ENST00000465966 MIS18AQ9NYP9 233 aa11.27□□□□□ -0.61
DDR1-242ENST00000465966 IBTKQ9P2D0 1353 aaPredicted RBP11.27□□□□□ -0.61
DDR1-242ENST00000465966 MYL6BP14649 208 aa11.26□□□□□ -0.61
DDR1-242ENST00000465966 CXCL9Q07325 125 aa11.26□□□□□ -0.61
DDR1-242ENST00000465966 TNIP1Q15025 636 aa11.26□□□□□ -0.61
DDR1-242ENST00000465966 PARP10Q53GL7 1025 aa11.26□□□□□ -0.61
DDR1-242ENST00000465966 SUSD4Q5VX71 490 aa11.26□□□□□ -0.61
DDR1-242ENST00000465966 ZC3H15Q8WU90 426 aaKnown RBP11.26□□□□□ -0.61
DDR1-242ENST00000465966 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
DDR1-242ENST00000465966 ZNF408Q9H9D4 720 aa11.26□□□□□ -0.61
DDR1-242ENST00000465966 ATP6V0A2Q9Y487 856 aa11.26□□□□□ -0.61
DDR1-242ENST00000465966 RIC1Q4ADV7 1423 aa11.26□□□□□ -0.61
DDR1-242ENST00000465966 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
DDR1-242ENST00000465966 GMPSP49915 693 aaPredicted RBP11.25□□□□□ -0.61
DDR1-242ENST00000465966 NOGQ13253 232 aa11.25□□□□□ -0.61
DDR1-242ENST00000465966 DGKZQ13574 1117 aa11.25□□□□□ -0.61
DDR1-242ENST00000465966 CIAPIN1Q6FI81 312 aa11.25□□□□□ -0.61
DDR1-242ENST00000465966 DPP8Q6V1X1 898 aaPredicted RBP11.25□□□□□ -0.61
DDR1-242ENST00000465966 GIGYF2Q6Y7W6 1299 aaKnown RBP11.25□□□□□ -0.61
DDR1-242ENST00000465966 TTLL7Q6ZT98 887 aa11.25□□□□□ -0.61
DDR1-242ENST00000465966 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
DDR1-242ENST00000465966 ZNF34Q8IZ26 560 aa11.25□□□□□ -0.61
DDR1-242ENST00000465966 UBN2Q6ZU65 1347 aa11.25□□□□□ -0.61
DDR1-242ENST00000465966 CDHR2Q9BYE9 1310 aa11.25□□□□□ -0.61
DDR1-242ENST00000465966 SIPA1L3O60292 1781 aaPredicted RBP11.25□□□□□ -0.61
DDR1-242ENST00000465966 BBOX1O75936 387 aa11.24□□□□□ -0.61
DDR1-242ENST00000465966 NTSR2O95665 410 aa11.24□□□□□ -0.61
DDR1-242ENST00000465966 UTP14AQ9BVJ6 771 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms