RNA–Protein interactions for RNA: ENST00000465672.1

RETREG2-209, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-209ENST00000465672 TRAF5O00463 557 aa20.65■□□□□ 0.9
RETREG2-209ENST00000465672 CFAP44Q96MT7 982 aa20.65■□□□□ 0.9
RETREG2-209ENST00000465672 PER1O15534 1290 aaPredicted RBP20.64■□□□□ 0.89
RETREG2-209ENST00000465672 PRKAR2BP31323 418 aa20.64■□□□□ 0.89
RETREG2-209ENST00000465672 SCNN1DP51172 638 aa20.64■□□□□ 0.89
RETREG2-209ENST00000465672 CST9Q5W186 159 aa20.64■□□□□ 0.89
RETREG2-209ENST00000465672 NUP98P52948 1817 aa20.63■□□□□ 0.89
RETREG2-209ENST00000465672 AOC2O75106 756 aa20.63■□□□□ 0.89
RETREG2-209ENST00000465672 MCM10Q7L590 875 aa20.63■□□□□ 0.89
RETREG2-209ENST00000465672 NUTM1Q86Y26 1132 aa20.63■□□□□ 0.89
RETREG2-209ENST00000465672 LARGE2Q8N3Y3 721 aa20.63■□□□□ 0.89
RETREG2-209ENST00000465672 SNED1Q8TER0 1413 aa20.62■□□□□ 0.89
RETREG2-209ENST00000465672 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
RETREG2-209ENST00000465672 RGS19P49795 217 aa20.62■□□□□ 0.89
RETREG2-209ENST00000465672 NGEFQ8N5V2 710 aa20.62■□□□□ 0.89
RETREG2-209ENST00000465672 ABCC12Q96J65 1359 aa20.61■□□□□ 0.89
RETREG2-209ENST00000465672 CC2D2BQ6DHV5 1058 aa20.61■□□□□ 0.89
RETREG2-209ENST00000465672 USP50Q70EL3 339 aaPredicted RBP20.61■□□□□ 0.89
RETREG2-209ENST00000465672 RTF1Q92541 710 aaKnown RBP20.61■□□□□ 0.89
RETREG2-209ENST00000465672 RPGRQ92834 1020 aaKnown RBP20.61■□□□□ 0.89
RETREG2-209ENST00000465672 TLL2Q9Y6L7 1015 aa20.61■□□□□ 0.89
RETREG2-209ENST00000465672 RGL2O15211 777 aa20.6■□□□□ 0.89
RETREG2-209ENST00000465672 CRY2Q49AN0 593 aa20.6■□□□□ 0.89
RETREG2-209ENST00000465672 NYXQ9GZU5 481 aa20.6■□□□□ 0.89
RETREG2-209ENST00000465672 DCTN1Q14203 1278 aa20.59■□□□□ 0.89
RETREG2-209ENST00000465672 SLC51AQ86UW1 340 aa20.59■□□□□ 0.89
RETREG2-209ENST00000465672 RSPH6AQ9H0K4 717 aa20.59■□□□□ 0.89
RETREG2-209ENST00000465672 MAP2K2P36507 400 aa20.58■□□□□ 0.89
RETREG2-209ENST00000465672 NIM1KQ8IY84 436 aa20.58■□□□□ 0.89
RETREG2-209ENST00000465672 MCOLN1Q9GZU1 580 aa20.58■□□□□ 0.89
RETREG2-209ENST00000465672 CELF2O95319 508 aaKnown RBP20.56■□□□□ 0.88
RETREG2-209ENST00000465672 GPTP24298 496 aa20.56■□□□□ 0.88
RETREG2-209ENST00000465672 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
RETREG2-209ENST00000465672 LAMB4A4D0S4 1761 aa20.56■□□□□ 0.88
RETREG2-209ENST00000465672 PPEF1O14829 653 aaPredicted RBP20.55■□□□□ 0.88
RETREG2-209ENST00000465672 PPIP5K2O43314 1243 aa20.55■□□□□ 0.88
RETREG2-209ENST00000465672 HOXA10P31260 410 aaPredicted RBP20.55■□□□□ 0.88
RETREG2-209ENST00000465672 GRIPAP1Q4V328 841 aa20.55■□□□□ 0.88
RETREG2-209ENST00000465672 SAPCD2Q86UD0 394 aa20.55■□□□□ 0.88
RETREG2-209ENST00000465672 RBM17Q96I25 401 aaKnown RBP20.55■□□□□ 0.88
RETREG2-209ENST00000465672 ADARB2Q9NS39 739 aaKnown RBP20.55■□□□□ 0.88
RETREG2-209ENST00000465672 AOC3Q16853 763 aa20.54■□□□□ 0.88
RETREG2-209ENST00000465672 CFAP53Q96M91 514 aa20.54■□□□□ 0.88
RETREG2-209ENST00000465672 ZNF408Q9H9D4 720 aa20.54■□□□□ 0.88
RETREG2-209ENST00000465672 GPRC5DQ9NZD1 345 aa20.54■□□□□ 0.88
RETREG2-209ENST00000465672 ERVV-1B6SEH8 477 aa20.53■□□□□ 0.88
RETREG2-209ENST00000465672 CA12O43570 354 aa20.53■□□□□ 0.88
RETREG2-209ENST00000465672 U2AF1L5P0DN76 240 aaPredicted RBP20.53■□□□□ 0.88
RETREG2-209ENST00000465672 U2AF1Q01081 240 aaKnown RBP eCLIP20.53■□□□□ 0.886e-6■■■■□ 22.1
RETREG2-209ENST00000465672 DGKZQ13574 1117 aa20.53■□□□□ 0.88
RETREG2-209ENST00000465672 CRAMP1Q96RY5 1269 aa20.53■□□□□ 0.88
RETREG2-209ENST00000465672 GLIS2Q9BZE0 524 aaPredicted RBP20.53■□□□□ 0.88
RETREG2-209ENST00000465672 PCDH10Q9P2E7 1040 aa20.53■□□□□ 0.88
RETREG2-209ENST00000465672 RRP7AQ9Y3A4 280 aaKnown RBP20.53■□□□□ 0.88
RETREG2-209ENST00000465672 MAP3K15Q6ZN16 1313 aa20.53■□□□□ 0.88
RETREG2-209ENST00000465672 TAF7Q15545 349 aaPredicted RBP20.52■□□□□ 0.88
RETREG2-209ENST00000465672 SUSD4Q5VX71 490 aa20.52■□□□□ 0.88
RETREG2-209ENST00000465672 KIF6Q6ZMV9 814 aa20.52■□□□□ 0.88
RETREG2-209ENST00000465672 TTLL7Q6ZT98 887 aa20.52■□□□□ 0.88
RETREG2-209ENST00000465672 NUDCQ9Y266 331 aa20.52■□□□□ 0.88
RETREG2-209ENST00000465672 PDE4DIPQ5VU43 2346 aa20.52■□□□□ 0.87
RETREG2-209ENST00000465672 NPC1L1Q9UHC9 1359 aa20.51■□□□□ 0.87
RETREG2-209ENST00000465672 CXCL9Q07325 125 aa20.51■□□□□ 0.87
RETREG2-209ENST00000465672 CIAPIN1Q6FI81 312 aa20.51■□□□□ 0.87
RETREG2-209ENST00000465672 TMX4Q9H1E5 349 aaPredicted RBP20.51■□□□□ 0.87
RETREG2-209ENST00000465672 ZBTB3Q9H5J0 574 aa20.51■□□□□ 0.87
RETREG2-209ENST00000465672 UBN2Q6ZU65 1347 aa20.51■□□□□ 0.87
RETREG2-209ENST00000465672 MYL6BP14649 208 aa20.5■□□□□ 0.87
RETREG2-209ENST00000465672 GMPSP49915 693 aaPredicted RBP20.5■□□□□ 0.87
RETREG2-209ENST00000465672 BRPF1P55201 1214 aaPredicted RBP20.5■□□□□ 0.87
RETREG2-209ENST00000465672 C3orf67Q6ZVT6 689 aa20.5■□□□□ 0.87
RETREG2-209ENST00000465672 RIC1Q4ADV7 1423 aa20.5■□□□□ 0.87
RETREG2-209ENST00000465672 ZNRF3Q9ULT6 936 aa20.49■□□□□ 0.87
RETREG2-209ENST00000465672 HHIPL1Q96JK4 782 aa20.48■□□□□ 0.87
RETREG2-209ENST00000465672 BCL2L13Q9BXK5 485 aa20.48■□□□□ 0.87
RETREG2-209ENST00000465672 DLG5Q8TDM6 1919 aa20.47■□□□□ 0.87
RETREG2-209ENST00000465672 POLR2AP24928 1970 aaKnown RBP20.47■□□□□ 0.87
RETREG2-209ENST00000465672 HTATSF1O43719 755 aaKnown RBP20.47■□□□□ 0.87
RETREG2-209ENST00000465672 ZIC5Q96T25 663 aa20.47■□□□□ 0.87
RETREG2-209ENST00000465672 ATP6V0A2Q9Y487 856 aa20.47■□□□□ 0.87
RETREG2-209ENST00000465672 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
RETREG2-209ENST00000465672 NTSR2O95665 410 aa20.46■□□□□ 0.87
RETREG2-209ENST00000465672 ZNF34Q8IZ26 560 aa20.46■□□□□ 0.87
RETREG2-209ENST00000465672 NLRP3Q96P20 1036 aa20.46■□□□□ 0.87
RETREG2-209ENST00000465672 VPS33BQ9H267 617 aa20.46■□□□□ 0.87
RETREG2-209ENST00000465672 KDM3BQ7LBC6 1761 aa20.46■□□□□ 0.87
RETREG2-209ENST00000465672 RAD17O75943 681 aa20.45■□□□□ 0.86
RETREG2-209ENST00000465672 HIRAP54198 1017 aaPredicted RBP20.45■□□□□ 0.86
RETREG2-209ENST00000465672 CDC37L1Q7L3B6 337 aa20.45■□□□□ 0.86
RETREG2-209ENST00000465672 PPP1R42Q7Z4L9 355 aa20.45■□□□□ 0.86
RETREG2-209ENST00000465672 SUPT20HQ8NEM7 779 aa20.45■□□□□ 0.86
RETREG2-209ENST00000465672 PGAP2Q9UHJ9 254 aa20.45■□□□□ 0.86
RETREG2-209ENST00000465672 CCER1Q8TC90 406 aaPredicted RBP20.44■□□□□ 0.86
RETREG2-209ENST00000465672 TRPM4Q8TD43 1214 aa20.44■□□□□ 0.86
RETREG2-209ENST00000465672 SHTN1A0MZ66 631 aa20.43■□□□□ 0.86
RETREG2-209ENST00000465672 TNRC18O15417 2968 aaPredicted RBP20.43■□□□□ 0.86
RETREG2-209ENST00000465672 NOGQ13253 232 aa20.43■□□□□ 0.86
RETREG2-209ENST00000465672 DPP8Q6V1X1 898 aaPredicted RBP20.43■□□□□ 0.86
RETREG2-209ENST00000465672 GIGYF2Q6Y7W6 1299 aaKnown RBP20.43■□□□□ 0.86
RETREG2-209ENST00000465672 USP48Q86UV5 1035 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms