RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 JCADQ9P266 1359 aa15.27■□□□□ 0.04
ARHGEF3-204ENST00000465659 PRAMEF22A3QJZ6 481 aa15.27■□□□□ 0.04
ARHGEF3-204ENST00000465659 PSMA5P28066 241 aa15.27■□□□□ 0.04
ARHGEF3-204ENST00000465659 ME3Q16798 604 aa15.27■□□□□ 0.04
ARHGEF3-204ENST00000465659 FUCA2Q9BTY2 467 aa15.27■□□□□ 0.04
ARHGEF3-204ENST00000465659 NMIQ13287 307 aaPredicted RBP15.27■□□□□ 0.03
ARHGEF3-204ENST00000465659 SCN11AQ9UI33 1791 aa15.27■□□□□ 0.03
ARHGEF3-204ENST00000465659 MED23Q9ULK4 1368 aa15.27■□□□□ 0.03
ARHGEF3-204ENST00000465659 R3HCC1Q9Y3T6 440 aaKnown RBP15.26■□□□□ 0.03
ARHGEF3-204ENST00000465659 C5P01031 1676 aa15.26■□□□□ 0.03
ARHGEF3-204ENST00000465659 SLC27A2O14975 620 aa15.26■□□□□ 0.03
ARHGEF3-204ENST00000465659 FIBPO43427 364 aa15.26■□□□□ 0.03
ARHGEF3-204ENST00000465659 PTMAP06454 111 aaKnown RBP15.26■□□□□ 0.03
ARHGEF3-204ENST00000465659 LARP1Q6PKG0 1096 aaKnown RBP15.26■□□□□ 0.03
ARHGEF3-204ENST00000465659 FAM227BQ96M60 508 aa15.26■□□□□ 0.03
ARHGEF3-204ENST00000465659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.26■□□□□ 0.03
ARHGEF3-204ENST00000465659 NPHP4O75161 1426 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 DNM1Q05193 864 aaKnown RBP15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 TSGA10IPQ3SY00 556 aa15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 KIAA2012Q0VF49 1180 aa15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 ANKRD1Q15327 319 aa15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 GLIPR1L2Q4G1C9 344 aa15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 RBM33Q96EV2 1170 aaKnown RBP15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 PDCL3Q9H2J4 239 aa15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 TPCN1Q9ULQ1 816 aa15.25■□□□□ 0.03
ARHGEF3-204ENST00000465659 RNF20Q5VTR2 975 aa15.24■□□□□ 0.03
ARHGEF3-204ENST00000465659 RGPD5Q99666 1765 aa15.24■□□□□ 0.03
ARHGEF3-204ENST00000465659 CCDC8Q9H0W5 538 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF3-204ENST00000465659 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
ARHGEF3-204ENST00000465659 AXIN2Q9Y2T1 843 aa15.24■□□□□ 0.03
ARHGEF3-204ENST00000465659 ELP1O95163 1332 aa15.24■□□□□ 0.03
ARHGEF3-204ENST00000465659 ABCC6O95255 1503 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 KIF1AQ12756 1690 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 NEURL1BA8MQ27 555 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 HCLS1P14317 486 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 PDCP20941 246 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 ZNF790Q6PG37 636 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 ORAI2Q96SN7 254 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 USP25Q9UHP3 1055 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 COL15A1P39059 1388 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 A0A0D9SFI3 127 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 KDM4AO75164 1064 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 KCNJ4P48050 445 aa15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 TLR7Q9NYK1 1049 aaKnown RBP15.23■□□□□ 0.03
ARHGEF3-204ENST00000465659 ADCY5O95622 1261 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 RPS6KB1P23443 525 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 GCKRQ14397 625 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 SASS6Q6UVJ0 657 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 RIC3Q7Z5B4 369 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 ERBB3P21860 1342 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 RFX7Q2KHR2 1363 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 PLEKHG2Q9H7P9 1386 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 NEXNQ0ZGT2 675 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 USPL1Q5W0Q7 1092 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 BLOC1S2Q6QNY1 142 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 NECAB1Q8N987 351 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 FSD1Q9BTV5 496 aa15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 METTL22Q9BUU2 404 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 KDM6AO15550 1401 aaPredicted RBP15.22■□□□□ 0.03
ARHGEF3-204ENST00000465659 AIMP1Q12904 312 aaKnown RBP15.21■□□□□ 0.03
ARHGEF3-204ENST00000465659 LARP1BQ659C4 914 aaKnown RBP15.21■□□□□ 0.03
ARHGEF3-204ENST00000465659 BOLA2Q9H3K6 86 aa15.21■□□□□ 0.03
ARHGEF3-204ENST00000465659 SLC52A2Q9HAB3 445 aa15.21■□□□□ 0.03
ARHGEF3-204ENST00000465659 COPRSQ9NQ92 184 aa15.21■□□□□ 0.03
ARHGEF3-204ENST00000465659 VPS37CA5D8V6 355 aaPredicted RBP15.21■□□□□ 0.03
ARHGEF3-204ENST00000465659 KRT85P78386 507 aa15.21■□□□□ 0.03
ARHGEF3-204ENST00000465659 PIBF1Q8WXW3 757 aa15.21■□□□□ 0.03
ARHGEF3-204ENST00000465659 ALS2Q96Q42 1657 aa15.21■□□□□ 0.02
ARHGEF3-204ENST00000465659 DYNC1I1O14576 645 aa15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 UQCRHLA0A096LP55 91 aa15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 UQCRHP07919 91 aa15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 ATP5JP18859 108 aa15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 TOB2Q14106 344 aaPredicted RBP15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 GIMAP6Q6P9H5 292 aa15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 LRP10Q7Z4F1 713 aa15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 NPHP3Q7Z494 1330 aa15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 TAF5LO75529 589 aa15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 MAP7D2Q96T17 732 aa15.2■□□□□ 0.02
ARHGEF3-204ENST00000465659 KRT32Q14532 448 aa15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 EPHA10Q5JZY3 1008 aa15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 TTC6Q86TZ1 520 aa15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 XAGE3Q8WTP9 111 aa15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 SIL1Q9H173 461 aa15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 RFX5P48382 616 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 COL9A3Q14050 684 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 RABL6Q3YEC7 729 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 CDC37L1Q7L3B6 337 aa15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 KRT28Q7Z3Y7 464 aa15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 ZNF589Q86UQ0 364 aaPredicted RBP15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 DDX54Q8TDD1 881 aaKnown RBP15.19■□□□□ 0.02
ARHGEF3-204ENST00000465659 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
ARHGEF3-204ENST00000465659 COPS6Q7L5N1 327 aa15.18■□□□□ 0.02
ARHGEF3-204ENST00000465659 SPTLC3Q9NUV7 552 aa15.18■□□□□ 0.02
ARHGEF3-204ENST00000465659 PHKG2P15735 406 aa15.18■□□□□ 0.02
ARHGEF3-204ENST00000465659 SLC39A6Q13433 755 aa15.18■□□□□ 0.02
ARHGEF3-204ENST00000465659 RAPGEF4Q8WZA2 1011 aa15.18■□□□□ 0.02
ARHGEF3-204ENST00000465659 SCAND2PQ9GZW5 306 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms