RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 CFHR5Q9BXR6 569 aa6.56□□□□□ -1.36
XRN1-205ENST00000465507 MARK1Q9P0L2 795 aa6.56□□□□□ -1.36
XRN1-205ENST00000465507 BCS1LQ9Y276 419 aa6.56□□□□□ -1.36
XRN1-205ENST00000465507 SHISA8B8ZZ34 492 aa6.55□□□□□ -1.36
XRN1-205ENST00000465507 PTCD1O75127 700 aaKnown RBP6.55□□□□□ -1.36
XRN1-205ENST00000465507 ITGB2P05107 769 aa6.55□□□□□ -1.36
XRN1-205ENST00000465507 SSFA2P28290 1259 aa6.55□□□□□ -1.36
XRN1-205ENST00000465507 MAP2K3P46734 347 aa6.55□□□□□ -1.36
XRN1-205ENST00000465507 TNP2Q05952 138 aa6.55□□□□□ -1.36
XRN1-205ENST00000465507 PLA2G4EQ3MJ16 856 aa6.55□□□□□ -1.36
XRN1-205ENST00000465507 RGL4Q8IZJ4 473 aa6.55□□□□□ -1.36
XRN1-205ENST00000465507 CMTR1Q8N1G2 835 aaKnown RBP6.55□□□□□ -1.36
XRN1-205ENST00000465507 USTQ9Y2C2 406 aa6.55□□□□□ -1.36
XRN1-205ENST00000465507 MICAL2O94851 1124 aa6.54□□□□□ -1.36
XRN1-205ENST00000465507 PCBP4P57723 403 aaKnown RBP6.54□□□□□ -1.36
XRN1-205ENST00000465507 SNRPNP63162 240 aaKnown RBP6.54□□□□□ -1.36
XRN1-205ENST00000465507 C1orf229Q6ZS94 237 aaPredicted RBP6.54□□□□□ -1.36
XRN1-205ENST00000465507 TREML1Q86YW5 311 aa6.54□□□□□ -1.36
XRN1-205ENST00000465507 BEND7Q8N7W2 519 aaPredicted RBP6.54□□□□□ -1.36
XRN1-205ENST00000465507 GTF3C2Q8WUA4 911 aaPredicted RBP6.54□□□□□ -1.36
XRN1-205ENST00000465507 C7orf43Q8WVR3 580 aa6.54□□□□□ -1.36
XRN1-205ENST00000465507 BHMTQ93088 406 aa6.54□□□□□ -1.36
XRN1-205ENST00000465507 LRRC4BQ9NT99 713 aa6.54□□□□□ -1.36
XRN1-205ENST00000465507 TGFBR3LH3BV60 316 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 C2CD2LO14523 706 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 FAM157BP0CG42 384 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 BRD2P25440 801 aaKnown RBP6.53□□□□□ -1.36
XRN1-205ENST00000465507 SERPINB4P48594 390 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 TYRO3Q06418 890 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 HIF1AQ16665 826 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 FAM26DQ5JW98 314 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 ATCAYQ86WG3 371 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 PNMA5Q96PV4 448 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 SLC30A3Q99726 388 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 HCN2Q9UL51 889 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 KCNH4Q9UQ05 1017 aa6.53□□□□□ -1.36
XRN1-205ENST00000465507 NEURL1BA8MQ27 555 aa6.52□□□□□ -1.37
XRN1-205ENST00000465507 PHLDB3Q6NSJ2 640 aa6.52□□□□□ -1.37
XRN1-205ENST00000465507 POTEAQ6S8J7 498 aa6.52□□□□□ -1.37
XRN1-205ENST00000465507 AEBP1Q8IUX7 1158 aa6.52□□□□□ -1.37
XRN1-205ENST00000465507 ETFBKMTQ8IXQ9 262 aa6.52□□□□□ -1.37
XRN1-205ENST00000465507 SPOCK3Q9BQ16 436 aa6.52□□□□□ -1.37
XRN1-205ENST00000465507 NDFIP2Q9NV92 336 aa6.52□□□□□ -1.37
XRN1-205ENST00000465507 MSTNO14793 375 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 AMPD1P23109 780 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 MPSTP25325 297 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 ARSDP51689 593 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 SPEM2Q0P670 501 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 B4GALNT3Q6L9W6 998 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 GALNT6Q8NCL4 622 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 GPR152Q8TDT2 470 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 MYO19Q96H55 970 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 GGA1Q9UJY5 639 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 MTMR7Q9Y216 660 aa6.51□□□□□ -1.37
XRN1-205ENST00000465507 GPC6Q9Y625 555 aaPredicted RBP6.51□□□□□ -1.37
XRN1-205ENST00000465507 H3BRB1 525 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 TNFRSF10BO14763 440 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 ZBTB39O15060 712 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 PROCP04070 461 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 EPB42P16452 691 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 PDE4CQ08493 712 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 SAMD5Q5TGI4 173 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 SYT9Q86SS6 491 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 EDARADDQ8WWZ3 215 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 TUT1Q9H6E5 874 aaKnown RBP6.5□□□□□ -1.37
XRN1-205ENST00000465507 RRAGCQ9HB90 399 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 STIM2Q9P246 746 aa6.5□□□□□ -1.37
XRN1-205ENST00000465507 GDF2Q9UK05 429 aaPredicted RBP6.5□□□□□ -1.37
XRN1-205ENST00000465507 EFSO43281 561 aa6.49□□□□□ -1.37
XRN1-205ENST00000465507 SASH3O75995 380 aa6.49□□□□□ -1.37
XRN1-205ENST00000465507 NFKB1P19838 968 aa6.49□□□□□ -1.37
XRN1-205ENST00000465507 ZAP70P43403 619 aa6.49□□□□□ -1.37
XRN1-205ENST00000465507 DNM1Q05193 864 aaKnown RBP6.49□□□□□ -1.37
XRN1-205ENST00000465507 SLCO4C1Q6ZQN7 724 aa6.49□□□□□ -1.37
XRN1-205ENST00000465507 GOLGA6L1Q8N7Z2 621 aa6.49□□□□□ -1.37
XRN1-205ENST00000465507 UBE2OQ9C0C9 1292 aaKnown RBP6.49□□□□□ -1.37
XRN1-205ENST00000465507 RTCBQ9Y3I0 505 aaKnown RBP6.49□□□□□ -1.37
XRN1-205ENST00000465507 PDIA4P13667 645 aaKnown RBP6.48□□□□□ -1.37
XRN1-205ENST00000465507 COL8A1P27658 744 aa6.48□□□□□ -1.37
XRN1-205ENST00000465507 ARID4AP29374 1257 aaPredicted RBP6.48□□□□□ -1.37
XRN1-205ENST00000465507 C8orf34Q49A92 452 aa6.48□□□□□ -1.37
XRN1-205ENST00000465507 GLYCTKQ8IVS8 523 aa6.48□□□□□ -1.37
XRN1-205ENST00000465507 ABTB2Q8N961 1025 aa6.48□□□□□ -1.37
XRN1-205ENST00000465507 HELQQ8TDG4 1101 aa6.48□□□□□ -1.37
XRN1-205ENST00000465507 EDEM1Q92611 657 aa6.48□□□□□ -1.37
XRN1-205ENST00000465507 COL26A1Q96A83 441 aa6.48□□□□□ -1.37
XRN1-205ENST00000465507 BIN2Q9UBW5 565 aaPredicted RBP6.48□□□□□ -1.37
XRN1-205ENST00000465507 DMGDHQ9UI17 866 aaKnown RBP6.48□□□□□ -1.37
XRN1-205ENST00000465507 MKL2Q9ULH7 1088 aa6.48□□□□□ -1.37
XRN1-205ENST00000465507 KRBA1A5PL33 1030 aa6.47□□□□□ -1.37
XRN1-205ENST00000465507 A6NHS1 94 aa6.47□□□□□ -1.37
XRN1-205ENST00000465507 OPLAHO14841 1288 aa6.47□□□□□ -1.37
XRN1-205ENST00000465507 HOXB4P17483 251 aaPredicted RBP6.47□□□□□ -1.37
XRN1-205ENST00000465507 TARSP26639 723 aaKnown RBP6.47□□□□□ -1.37
XRN1-205ENST00000465507 INPP5BP32019 993 aa6.47□□□□□ -1.37
XRN1-205ENST00000465507 MLLT1Q03111 559 aaPredicted RBP6.47□□□□□ -1.37
XRN1-205ENST00000465507 NEUROD1Q13562 356 aa6.47□□□□□ -1.37
XRN1-205ENST00000465507 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.47□□□□□ -1.37
XRN1-205ENST00000465507 UBAP1LF5GYI3 381 aa6.46□□□□□ -1.38
XRN1-205ENST00000465507 XYLBO75191 536 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms