RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 NBPF15Q8N660 670 aa10.4□□□□□ -0.74
UBE4B-205ENST00000465408 SOS1Q07889 1333 aaPredicted RBP10.39□□□□□ -0.75
UBE4B-205ENST00000465408 EIF2S2P20042 333 aaKnown RBP10.39□□□□□ -0.75
UBE4B-205ENST00000465408 MEIS3Q99687 375 aa10.39□□□□□ -0.75
UBE4B-205ENST00000465408 COL6A3P12111 3177 aa10.38□□□□□ -0.75
UBE4B-205ENST00000465408 SSFA2P28290 1259 aa10.38□□□□□ -0.75
UBE4B-205ENST00000465408 CCT4P50991 539 aaKnown RBP10.38□□□□□ -0.75
UBE4B-205ENST00000465408 NUCB1Q02818 461 aa10.38□□□□□ -0.75
UBE4B-205ENST00000465408 FKBP5Q13451 457 aaPredicted RBP10.38□□□□□ -0.75
UBE4B-205ENST00000465408 IPO9Q96P70 1041 aaKnown RBP10.38□□□□□ -0.75
UBE4B-205ENST00000465408 LNPKQ9C0E8 428 aa10.38□□□□□ -0.75
UBE4B-205ENST00000465408 CCDC87Q9NVE4 849 aa10.38□□□□□ -0.75
UBE4B-205ENST00000465408 SPG7Q9UQ90 795 aa10.38□□□□□ -0.75
UBE4B-205ENST00000465408 KDM3BQ7LBC6 1761 aa10.37□□□□□ -0.75
UBE4B-205ENST00000465408 PHKG2P15735 406 aa10.37□□□□□ -0.75
UBE4B-205ENST00000465408 ANKRD45Q5TZF3 282 aa10.37□□□□□ -0.75
UBE4B-205ENST00000465408 ERICH6Q7L0X2 663 aa10.37□□□□□ -0.75
UBE4B-205ENST00000465408 CHD1LQ86WJ1 897 aa10.37□□□□□ -0.75
UBE4B-205ENST00000465408 CAPNS2Q96L46 248 aa10.37□□□□□ -0.75
UBE4B-205ENST00000465408 PHAXQ9H814 394 aaKnown RBP10.37□□□□□ -0.75
UBE4B-205ENST00000465408 CHPF2Q9P2E5 772 aa10.37□□□□□ -0.75
UBE4B-205ENST00000465408 NOP58Q9Y2X3 529 aaKnown RBP10.37□□□□□ -0.75
UBE4B-205ENST00000465408 PALLDQ8WX93 1383 aa10.37□□□□□ -0.75
UBE4B-205ENST00000465408 C4AP0C0L4 1744 aa10.36□□□□□ -0.75
UBE4B-205ENST00000465408 SEC24BO95487 1268 aa10.36□□□□□ -0.75
UBE4B-205ENST00000465408 ANXA1P04083 346 aa10.36□□□□□ -0.75
UBE4B-205ENST00000465408 GRM1Q13255 1194 aa10.36□□□□□ -0.75
UBE4B-205ENST00000465408 CEP85Q6P2H3 762 aa10.36□□□□□ -0.75
UBE4B-205ENST00000465408 LDHDQ86WU2 507 aa10.36□□□□□ -0.75
UBE4B-205ENST00000465408 ANKRD44Q8N8A2 993 aa10.36□□□□□ -0.75
UBE4B-205ENST00000465408 GPR101Q96P66 508 aaPredicted RBP10.36□□□□□ -0.75
UBE4B-205ENST00000465408 ABT1Q9ULW3 272 aaKnown RBP10.36□□□□□ -0.75
UBE4B-205ENST00000465408 MKI67P46013 3256 aaKnown RBP10.35□□□□□ -0.75
UBE4B-205ENST00000465408 PRAMEF22A3QJZ6 481 aa10.35□□□□□ -0.75
UBE4B-205ENST00000465408 CYP27B1O15528 508 aa10.35□□□□□ -0.75
UBE4B-205ENST00000465408 HOXB7P09629 217 aa10.35□□□□□ -0.75
UBE4B-205ENST00000465408 CHRNA5P30532 468 aa10.35□□□□□ -0.75
UBE4B-205ENST00000465408 SLC39A6Q13433 755 aa10.35□□□□□ -0.75
UBE4B-205ENST00000465408 CYP4F22Q6NT55 531 aa10.35□□□□□ -0.75
UBE4B-205ENST00000465408 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
UBE4B-205ENST00000465408 IFNL2Q8IZJ0 200 aa10.35□□□□□ -0.75
UBE4B-205ENST00000465408 MPNDQ8N594 471 aa10.35□□□□□ -0.75
UBE4B-205ENST00000465408 CCDC88AQ3V6T2 1871 aa10.34□□□□□ -0.75
UBE4B-205ENST00000465408 AOC2O75106 756 aa10.34□□□□□ -0.75
UBE4B-205ENST00000465408 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
UBE4B-205ENST00000465408 BCL11AQ9H165 835 aa10.34□□□□□ -0.75
UBE4B-205ENST00000465408 SLC52A2Q9HAB3 445 aa10.34□□□□□ -0.75
UBE4B-205ENST00000465408 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.34□□□□□ -0.75
UBE4B-205ENST00000465408 GNAI2P04899 355 aa10.33□□□□□ -0.76
UBE4B-205ENST00000465408 PROSER3Q2NL68 480 aa10.33□□□□□ -0.76
UBE4B-205ENST00000465408 RPAP2Q8IXW5 612 aaPredicted RBP10.33□□□□□ -0.76
UBE4B-205ENST00000465408 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
UBE4B-205ENST00000465408 HEG1Q9ULI3 1381 aa10.33□□□□□ -0.76
UBE4B-205ENST00000465408 APBB1O00213 710 aa10.32□□□□□ -0.76
UBE4B-205ENST00000465408 DDNO94850 711 aaPredicted RBP10.32□□□□□ -0.76
UBE4B-205ENST00000465408 NFATC2IPQ8NCF5 419 aa10.32□□□□□ -0.76
UBE4B-205ENST00000465408 LINC00116Q8NCU8 138 aa10.32□□□□□ -0.76
UBE4B-205ENST00000465408 DCTPP1Q9H773 170 aa10.32□□□□□ -0.76
UBE4B-205ENST00000465408 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
UBE4B-205ENST00000465408 MRC1P22897 1456 aa10.31□□□□□ -0.76
UBE4B-205ENST00000465408 NFKBIEO00221 500 aa10.31□□□□□ -0.76
UBE4B-205ENST00000465408 GNPATO15228 680 aa10.31□□□□□ -0.76
UBE4B-205ENST00000465408 CA12O43570 354 aa10.31□□□□□ -0.76
UBE4B-205ENST00000465408 SMARCA5O60264 1052 aaPredicted RBP10.31□□□□□ -0.76
UBE4B-205ENST00000465408 GNAI3P08754 354 aa10.31□□□□□ -0.76
UBE4B-205ENST00000465408 HMGB2P26583 209 aaKnown RBP10.31□□□□□ -0.76
UBE4B-205ENST00000465408 ECE1P42892 770 aa10.31□□□□□ -0.76
UBE4B-205ENST00000465408 ZNF790Q6PG37 636 aa10.31□□□□□ -0.76
UBE4B-205ENST00000465408 DDRGK1Q96HY6 314 aa10.31□□□□□ -0.76
UBE4B-205ENST00000465408 ANP32EQ9BTT0 268 aa10.31□□□□□ -0.76
UBE4B-205ENST00000465408 LRRFIP2Q9Y608 721 aaKnown RBP10.31□□□□□ -0.76
UBE4B-205ENST00000465408 PI4KAP2A4QPH2 592 aa10.3□□□□□ -0.76
UBE4B-205ENST00000465408 HMMRO75330 724 aa10.3□□□□□ -0.76
UBE4B-205ENST00000465408 HSP90AB1P08238 724 aaKnown RBP10.3□□□□□ -0.76
UBE4B-205ENST00000465408 CABP4P57796 275 aa10.3□□□□□ -0.76
UBE4B-205ENST00000465408 NLGN1Q8N2Q7 840 aa10.3□□□□□ -0.76
UBE4B-205ENST00000465408 PI4KAP1Q8N8J0 262 aa10.3□□□□□ -0.76
UBE4B-205ENST00000465408 ZCRB1Q8TBF4 217 aaKnown RBP10.3□□□□□ -0.76
UBE4B-205ENST00000465408 DNAAF4Q8WXU2 420 aa10.3□□□□□ -0.76
UBE4B-205ENST00000465408 CHMP4AQ9BY43 222 aa10.3□□□□□ -0.76
UBE4B-205ENST00000465408 SRCIN1Q9C0H9 1055 aa10.3□□□□□ -0.76
UBE4B-205ENST00000465408 TAF1DQ9H5J8 278 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-205ENST00000465408 DBF4Q9UBU7 674 aaPredicted RBP10.3□□□□□ -0.76
UBE4B-205ENST00000465408 PARP3Q9Y6F1 533 aa10.3□□□□□ -0.76
UBE4B-205ENST00000465408 ADAMTSL1Q8N6G6 1762 aa10.29□□□□□ -0.76
UBE4B-205ENST00000465408 UBTFL1P0CB47 393 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-205ENST00000465408 BEND3Q5T5X7 828 aa10.29□□□□□ -0.76
UBE4B-205ENST00000465408 OTUD7AQ8TE49 926 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-205ENST00000465408 ZNF496Q96IT1 587 aaPredicted RBP10.29□□□□□ -0.76
UBE4B-205ENST00000465408 USP44Q9H0E7 712 aa10.29□□□□□ -0.76
UBE4B-205ENST00000465408 PCDH11XQ9BZA7 1347 aa10.29□□□□□ -0.76
UBE4B-205ENST00000465408 PCDH11YQ9BZA8 1340 aa10.29□□□□□ -0.76
UBE4B-205ENST00000465408 SCN11AQ9UI33 1791 aa10.29□□□□□ -0.76
UBE4B-205ENST00000465408 TRIOBPQ9H2D6 2365 aa10.29□□□□□ -0.76
UBE4B-205ENST00000465408 PNMA6EA0A0J9YXQ4 647 aa10.28□□□□□ -0.76
UBE4B-205ENST00000465408 MYL6BP14649 208 aa10.28□□□□□ -0.76
UBE4B-205ENST00000465408 MAP2K2P36507 400 aa10.28□□□□□ -0.76
UBE4B-205ENST00000465408 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
UBE4B-205ENST00000465408 MNX1P50219 401 aaPredicted RBP10.28□□□□□ -0.76
UBE4B-205ENST00000465408 MFAP1P55081 439 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms