RNA–Protein interactions for RNA: ENST00000464852.1

TNRC18-209, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 418 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-209ENST00000464852 DDX19BQ9UMR2 479 aa13.68□□□□□ -0.22
TNRC18-209ENST00000464852 UBR3Q6ZT12 1888 aa13.67□□□□□ -0.22
TNRC18-209ENST00000464852 ARFGEF1Q9Y6D6 1849 aa13.67□□□□□ -0.22
TNRC18-209ENST00000464852 IL6STP40189 918 aaPredicted RBP13.67□□□□□ -0.22
TNRC18-209ENST00000464852 INTS5Q6P9B9 1019 aaKnown RBP13.67□□□□□ -0.22
TNRC18-209ENST00000464852 RIC3Q7Z5B4 369 aa13.67□□□□□ -0.22
TNRC18-209ENST00000464852 ITPRIPQ8IWB1 547 aa13.67□□□□□ -0.22
TNRC18-209ENST00000464852 DNAAF4Q8WXU2 420 aa13.67□□□□□ -0.22
TNRC18-209ENST00000464852 CCDC87Q9NVE4 849 aa13.67□□□□□ -0.22
TNRC18-209ENST00000464852 A0A0G2JLW4 131 aa13.66□□□□□ -0.22
TNRC18-209ENST00000464852 F6X3S4 739 aa13.66□□□□□ -0.22
TNRC18-209ENST00000464852 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
TNRC18-209ENST00000464852 PIP4K2AP48426 406 aaPredicted RBP13.66□□□□□ -0.22
TNRC18-209ENST00000464852 SLC4A10Q6U841 1118 aa13.66□□□□□ -0.22
TNRC18-209ENST00000464852 FLAD1Q8NFF5 587 aa13.66□□□□□ -0.22
TNRC18-209ENST00000464852 PPP4R2Q9NY27 417 aa13.66□□□□□ -0.22
TNRC18-209ENST00000464852 MKRN1Q9UHC7 482 aaKnown RBP13.66□□□□□ -0.22
TNRC18-209ENST00000464852 TJP1Q07157 1748 aa13.65□□□□□ -0.22
TNRC18-209ENST00000464852 CTCFP49711 727 aaPredicted RBP13.65□□□□□ -0.22
TNRC18-209ENST00000464852 LBX1P52954 281 aa13.65□□□□□ -0.22
TNRC18-209ENST00000464852 PLBD2Q8NHP8 589 aa13.65□□□□□ -0.22
TNRC18-209ENST00000464852 ZBTB1Q9Y2K1 713 aa13.65□□□□□ -0.22
TNRC18-209ENST00000464852 MAP3K2Q9Y2U5 619 aa13.65□□□□□ -0.22
TNRC18-209ENST00000464852 CCDC85CA6NKD9 419 aa13.64□□□□□ -0.23
TNRC18-209ENST00000464852 ZBTB7BO15156 539 aaPredicted RBP13.64□□□□□ -0.23
TNRC18-209ENST00000464852 ZBTB22O15209 634 aa13.64□□□□□ -0.23
TNRC18-209ENST00000464852 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
TNRC18-209ENST00000464852 NEXNQ0ZGT2 675 aa13.64□□□□□ -0.23
TNRC18-209ENST00000464852 LINC00116Q8NCU8 138 aa13.64□□□□□ -0.23
TNRC18-209ENST00000464852 SRCIN1Q9C0H9 1055 aa13.64□□□□□ -0.23
TNRC18-209ENST00000464852 CNTNAP4Q9C0A0 1308 aa13.64□□□□□ -0.23
TNRC18-209ENST00000464852 A0A087WZG4 1122 aa13.63□□□□□ -0.23
TNRC18-209ENST00000464852 BEND3Q5T5X7 828 aa13.63□□□□□ -0.23
TNRC18-209ENST00000464852 KIF6Q6ZMV9 814 aa13.63□□□□□ -0.23
TNRC18-209ENST00000464852 TTLL7Q6ZT98 887 aa13.63□□□□□ -0.23
TNRC18-209ENST00000464852 METTL22Q9BUU2 404 aaPredicted RBP13.63□□□□□ -0.23
TNRC18-209ENST00000464852 ZBTB40Q9NUA8 1239 aa13.63□□□□□ -0.23
TNRC18-209ENST00000464852 CCDC88AQ3V6T2 1871 aa13.62□□□□□ -0.23
TNRC18-209ENST00000464852 RPS6KA4O75676 772 aa13.62□□□□□ -0.23
TNRC18-209ENST00000464852 ALDH1L1O75891 902 aa13.62□□□□□ -0.23
TNRC18-209ENST00000464852 LINS1Q8NG48 757 aa13.62□□□□□ -0.23
TNRC18-209ENST00000464852 ZNF330Q9Y3S2 320 aaPredicted RBP13.62□□□□□ -0.23
TNRC18-209ENST00000464852 MYH14Q7Z406 1995 aaKnown RBP13.62□□□□□ -0.23
TNRC18-209ENST00000464852 ERVV-1B6SEH8 477 aa13.61□□□□□ -0.23
TNRC18-209ENST00000464852 RNF181Q9P0P0 153 aa13.61□□□□□ -0.23
TNRC18-209ENST00000464852 C4BP0C0L5 1744 aa13.61□□□□□ -0.23
TNRC18-209ENST00000464852 COL5A3P25940 1745 aaPredicted RBP13.61□□□□□ -0.23
TNRC18-209ENST00000464852 MAP3K15Q6ZN16 1313 aa13.61□□□□□ -0.23
TNRC18-209ENST00000464852 GNAI3P08754 354 aa13.6□□□□□ -0.23
TNRC18-209ENST00000464852 TGFB2P61812 414 aa13.6□□□□□ -0.23
TNRC18-209ENST00000464852 HSP90AB3PQ58FF7 597 aa13.6□□□□□ -0.23
TNRC18-209ENST00000464852 DZIP3Q86Y13 1208 aaKnown RBP13.6□□□□□ -0.23
TNRC18-209ENST00000464852 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
TNRC18-209ENST00000464852 RTCBQ9Y3I0 505 aaKnown RBP13.6□□□□□ -0.23
TNRC18-209ENST00000464852 IBTKQ9P2D0 1353 aaPredicted RBP13.59□□□□□ -0.23
TNRC18-209ENST00000464852 DPEP1P16444 411 aa13.59□□□□□ -0.23
TNRC18-209ENST00000464852 TRIM28Q13263 835 aaKnown RBP13.59□□□□□ -0.23
TNRC18-209ENST00000464852 TCIRG1Q13488 830 aa13.59□□□□□ -0.23
TNRC18-209ENST00000464852 GIGYF2Q6Y7W6 1299 aaKnown RBP13.59□□□□□ -0.23
TNRC18-209ENST00000464852 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
TNRC18-209ENST00000464852 AK7Q96M32 723 aa13.59□□□□□ -0.23
TNRC18-209ENST00000464852 MYD88Q99836 296 aa13.59□□□□□ -0.23
TNRC18-209ENST00000464852 ZBTB3Q9H5J0 574 aa13.59□□□□□ -0.23
TNRC18-209ENST00000464852 TBC1D2BQ9UPU7 963 aa13.59□□□□□ -0.23
TNRC18-209ENST00000464852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
TNRC18-209ENST00000464852 NEURL1BA8MQ27 555 aa13.58□□□□□ -0.24
TNRC18-209ENST00000464852 RGL2O15211 777 aa13.58□□□□□ -0.24
TNRC18-209ENST00000464852 GNPATO15228 680 aa13.58□□□□□ -0.24
TNRC18-209ENST00000464852 PHF14O94880 888 aa13.58□□□□□ -0.24
TNRC18-209ENST00000464852 IGKV5-2P06315 115 aa13.58□□□□□ -0.24
TNRC18-209ENST00000464852 VEGFAP15692 232 aaPredicted RBP13.58□□□□□ -0.24
TNRC18-209ENST00000464852 KCNA3P22001 575 aa13.58□□□□□ -0.24
TNRC18-209ENST00000464852 TRAPPC3LQ5T215 181 aa13.58□□□□□ -0.24
TNRC18-209ENST00000464852 USP44Q9H0E7 712 aa13.58□□□□□ -0.24
TNRC18-209ENST00000464852 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
TNRC18-209ENST00000464852 WBP1LQ9NX94 342 aa13.58□□□□□ -0.24
TNRC18-209ENST00000464852 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.24
TNRC18-209ENST00000464852 HSPA8P11142 646 aaKnown RBP13.57□□□□□ -0.24
TNRC18-209ENST00000464852 CWF19L2Q2TBE0 894 aaKnown RBP13.57□□□□□ -0.24
TNRC18-209ENST00000464852 CLEC4GQ6UXB4 293 aa13.57□□□□□ -0.24
TNRC18-209ENST00000464852 CCDC191Q8NCU4 936 aa13.57□□□□□ -0.24
TNRC18-209ENST00000464852 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
TNRC18-209ENST00000464852 COL15A1P39059 1388 aa13.57□□□□□ -0.24
TNRC18-209ENST00000464852 POTECB2RU33 542 aa13.56□□□□□ -0.24
TNRC18-209ENST00000464852 GNAI2P04899 355 aa13.56□□□□□ -0.24
TNRC18-209ENST00000464852 GCKRQ14397 625 aa13.56□□□□□ -0.24
TNRC18-209ENST00000464852 MEIS3Q99687 375 aa13.56□□□□□ -0.24
TNRC18-209ENST00000464852 ISCA1Q9BUE6 129 aa13.56□□□□□ -0.24
TNRC18-209ENST00000464852 NARFQ9UHQ1 456 aa13.56□□□□□ -0.24
TNRC18-209ENST00000464852 ZNF652Q9Y2D9 606 aa13.56□□□□□ -0.24
TNRC18-209ENST00000464852 PCDHB15Q9Y5E8 787 aa13.56□□□□□ -0.24
TNRC18-209ENST00000464852 CNTNAP1P78357 1384 aa13.56□□□□□ -0.24
TNRC18-209ENST00000464852 ATP5J2-PTCD1G3V325 749 aa13.55□□□□□ -0.24
TNRC18-209ENST00000464852 ZPR1O75312 459 aa13.55□□□□□ -0.24
TNRC18-209ENST00000464852 CAMTA2O94983 1202 aa13.55□□□□□ -0.24
TNRC18-209ENST00000464852 MMP10P09238 476 aa13.55□□□□□ -0.24
TNRC18-209ENST00000464852 UBTFL1P0CB47 393 aaPredicted RBP13.55□□□□□ -0.24
TNRC18-209ENST00000464852 HLFQ16534 295 aa13.55□□□□□ -0.24
TNRC18-209ENST00000464852 B4GALNT3Q6L9W6 998 aa13.55□□□□□ -0.24
TNRC18-209ENST00000464852 RPAP2Q8IXW5 612 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms