RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 ANKRD13DQ6ZTN6 518 aa11.39□□□□□ -0.59
NUDCD3-204ENST00000464812 PLBD2Q8NHP8 589 aa11.39□□□□□ -0.59
NUDCD3-204ENST00000464812 EXOC6Q8TAG9 804 aa11.39□□□□□ -0.59
NUDCD3-204ENST00000464812 NARFQ9UHQ1 456 aa11.39□□□□□ -0.59
NUDCD3-204ENST00000464812 TNRC6CQ9HCJ0 1690 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-204ENST00000464812 POLRMTO00411 1230 aaKnown RBP11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 DDX58O95786 925 aaKnown RBP11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 MVPQ14764 893 aaKnown RBP11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 NFIXQ14938 502 aa11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 CWF19L2Q2TBE0 894 aaKnown RBP11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 INTS3Q68E01 1043 aaKnown RBP11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 KIF6Q6ZMV9 814 aa11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 RIC3Q7Z5B4 369 aa11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 ITPRIPQ8IWB1 547 aa11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 MYD88Q99836 296 aa11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
NUDCD3-204ENST00000464812 UBN2Q6ZU65 1347 aa11.37□□□□□ -0.59
NUDCD3-204ENST00000464812 GIGYF2Q6Y7W6 1299 aaKnown RBP11.37□□□□□ -0.59
NUDCD3-204ENST00000464812 PPP1R1BQ9UD71 204 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-204ENST00000464812 COL11A2P13942 1736 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-204ENST00000464812 NEURL1BA8MQ27 555 aa11.36□□□□□ -0.59
NUDCD3-204ENST00000464812 ERVV-1B6SEH8 477 aa11.36□□□□□ -0.59
NUDCD3-204ENST00000464812 ATP5J2-PTCD1G3V325 749 aa11.36□□□□□ -0.59
NUDCD3-204ENST00000464812 YBX3P16989 372 aaKnown RBP eCLIP11.36□□□□□ -0.59
NUDCD3-204ENST00000464812 KCNA3P22001 575 aa11.36□□□□□ -0.59
NUDCD3-204ENST00000464812 RFC4P35249 363 aa11.36□□□□□ -0.59
NUDCD3-204ENST00000464812 TBC1D9BQ66K14 1250 aa11.36□□□□□ -0.59
NUDCD3-204ENST00000464812 MEIS3Q99687 375 aa11.36□□□□□ -0.59
NUDCD3-204ENST00000464812 ISCA1Q9BUE6 129 aa11.36□□□□□ -0.59
NUDCD3-204ENST00000464812 SRCIN1Q9C0H9 1055 aa11.36□□□□□ -0.59
NUDCD3-204ENST00000464812 SPEF2Q9C093 1822 aa11.35□□□□□ -0.59
NUDCD3-204ENST00000464812 A0A087WZG4 1122 aa11.35□□□□□ -0.59
NUDCD3-204ENST00000464812 GPTP24298 496 aa11.35□□□□□ -0.59
NUDCD3-204ENST00000464812 POLD1P28340 1107 aa11.35□□□□□ -0.59
NUDCD3-204ENST00000464812 CCT4P50991 539 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-204ENST00000464812 NLGN1Q8N2Q7 840 aa11.35□□□□□ -0.59
NUDCD3-204ENST00000464812 LINS1Q8NG48 757 aa11.35□□□□□ -0.59
NUDCD3-204ENST00000464812 IBTKQ9P2D0 1353 aaPredicted RBP11.35□□□□□ -0.59
NUDCD3-204ENST00000464812 ZBTB7BO15156 539 aaPredicted RBP11.34□□□□□ -0.59
NUDCD3-204ENST00000464812 NEFLP07196 543 aa11.34□□□□□ -0.59
NUDCD3-204ENST00000464812 MS4A1P11836 297 aa11.34□□□□□ -0.59
NUDCD3-204ENST00000464812 TCIRG1Q13488 830 aa11.34□□□□□ -0.59
NUDCD3-204ENST00000464812 ZNF34Q8IZ26 560 aa11.34□□□□□ -0.59
NUDCD3-204ENST00000464812 WWC3Q9ULE0 1092 aa11.34□□□□□ -0.59
NUDCD3-204ENST00000464812 DLEC1Q9Y238 1755 aa11.33□□□□□ -0.59
NUDCD3-204ENST00000464812 COL4A1P02462 1669 aa11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 ALDH1L1O75891 902 aa11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 NLRP10Q86W26 655 aa11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 KLHL34Q8N239 644 aa11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 CCDC24Q8N4L8 307 aa11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 JARID2Q92833 1246 aaPredicted RBP11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 C1orf115Q9H7X2 142 aa11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 CD2APQ9Y5K6 639 aa11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 TAF1P21675 1872 aa11.33□□□□□ -0.6
NUDCD3-204ENST00000464812 ABCC12Q96J65 1359 aa11.32□□□□□ -0.6
NUDCD3-204ENST00000464812 RGL2O15211 777 aa11.32□□□□□ -0.6
NUDCD3-204ENST00000464812 NBPF7P0C2Y1 421 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-204ENST00000464812 CASP7P55210 303 aa11.32□□□□□ -0.6
NUDCD3-204ENST00000464812 GCKRQ14397 625 aa11.32□□□□□ -0.6
NUDCD3-204ENST00000464812 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-204ENST00000464812 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
NUDCD3-204ENST00000464812 GTF3C3Q9Y5Q9 886 aa11.32□□□□□ -0.6
NUDCD3-204ENST00000464812 UTYO14607 1347 aa11.32□□□□□ -0.6
NUDCD3-204ENST00000464812 A0A1B0GUL6 1792 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 GRM8O00222 908 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 ZPR1O75312 459 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 NTSR2O95665 410 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 DPEP1P16444 411 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 NEXNQ0ZGT2 675 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 HSP90AB3PQ58FF7 597 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 CLEC4GQ6UXB4 293 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 BICDL1Q6ZP65 573 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 SLC51AQ86UW1 340 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 CCDC191Q8NCU4 936 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 KAZALD1Q96I82 304 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 CWC25Q9NXE8 425 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 NIP7Q9Y221 180 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 ZNF652Q9Y2D9 606 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 CACNA1SQ13698 1873 aa11.31□□□□□ -0.6
NUDCD3-204ENST00000464812 ABCB7O75027 752 aa11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 SERPINB2P05120 415 aa11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 HMGB2P26583 209 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 CHRNA5P30532 468 aa11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 TRIM28Q13263 835 aaKnown RBP11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 RTL5Q5HYW3 569 aaPredicted RBP11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 SUSD4Q5VX71 490 aa11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 PRR5LQ6MZQ0 368 aa11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 UBE3BQ7Z3V4 1068 aa11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
NUDCD3-204ENST00000464812 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
NUDCD3-204ENST00000464812 H7C1W4 665 aa11.29□□□□□ -0.6
NUDCD3-204ENST00000464812 EPHA10Q5JZY3 1008 aa11.29□□□□□ -0.6
NUDCD3-204ENST00000464812 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
NUDCD3-204ENST00000464812 ARFGEF1Q9Y6D6 1849 aa11.28□□□□□ -0.6
NUDCD3-204ENST00000464812 PCCAP05165 728 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms