RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 C2CD5Q86YS7 1000 aa17.05■□□□□ 0.32
TSPAN1-202ENST00000464786 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
TSPAN1-202ENST00000464786 NRXN2Q9P2S2 1712 aa17.04■□□□□ 0.32
TSPAN1-202ENST00000464786 ADCY9O60503 1353 aa17.04■□□□□ 0.32
TSPAN1-202ENST00000464786 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
TSPAN1-202ENST00000464786 GPR162Q16538 588 aa17.04■□□□□ 0.32
TSPAN1-202ENST00000464786 ERFEQ4G0M1 354 aa17.04■□□□□ 0.32
TSPAN1-202ENST00000464786 NUTM1Q86Y26 1132 aa17.04■□□□□ 0.32
TSPAN1-202ENST00000464786 LINS1Q8NG48 757 aa17.04■□□□□ 0.32
TSPAN1-202ENST00000464786 NLRP3Q96P20 1036 aa17.04■□□□□ 0.32
TSPAN1-202ENST00000464786 AFDNP55196 1824 aaKnown RBP17.04■□□□□ 0.32
TSPAN1-202ENST00000464786 IPO8O15397 1037 aaKnown RBP17.03■□□□□ 0.32
TSPAN1-202ENST00000464786 CCDC24Q8N4L8 307 aa17.03■□□□□ 0.32
TSPAN1-202ENST00000464786 ZBTB38Q8NAP3 1195 aaPredicted RBP17.03■□□□□ 0.32
TSPAN1-202ENST00000464786 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
TSPAN1-202ENST00000464786 PCCAP05165 728 aaPredicted RBP17.02■□□□□ 0.32
TSPAN1-202ENST00000464786 IGKV5-2P06315 115 aa17.02■□□□□ 0.32
TSPAN1-202ENST00000464786 KCNA3P22001 575 aa17.02■□□□□ 0.32
TSPAN1-202ENST00000464786 CHRNA5P30532 468 aa17.02■□□□□ 0.32
TSPAN1-202ENST00000464786 DALRD3Q5D0E6 543 aaKnown RBP17.02■□□□□ 0.32
TSPAN1-202ENST00000464786 STYK1Q6J9G0 422 aa17.02■□□□□ 0.32
TSPAN1-202ENST00000464786 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
TSPAN1-202ENST00000464786 MASTLQ96GX5 879 aa17.02■□□□□ 0.32
TSPAN1-202ENST00000464786 BCL2L13Q9BXK5 485 aa17.02■□□□□ 0.32
TSPAN1-202ENST00000464786 KIF13BQ9NQT8 1826 aa17.02■□□□□ 0.31
TSPAN1-202ENST00000464786 NEURL1BA8MQ27 555 aa17.01■□□□□ 0.31
TSPAN1-202ENST00000464786 SRGNP10124 158 aa17.01■□□□□ 0.31
TSPAN1-202ENST00000464786 NPR1P16066 1061 aa17.01■□□□□ 0.31
TSPAN1-202ENST00000464786 TTLL6Q8N841 843 aa17.01■□□□□ 0.31
TSPAN1-202ENST00000464786 CNKSR1Q969H4 720 aa17.01■□□□□ 0.31
TSPAN1-202ENST00000464786 ZNF622Q969S3 477 aaKnown RBP eCLIP17.01■□□□□ 0.31
TSPAN1-202ENST00000464786 API5Q9BZZ5 524 aaKnown RBP17.01■□□□□ 0.31
TSPAN1-202ENST00000464786 KIF16BQ96L93 1317 aa17■□□□□ 0.31
TSPAN1-202ENST00000464786 PXDNLA1KZ92 1463 aa17■□□□□ 0.31
TSPAN1-202ENST00000464786 F6X3S4 739 aa17■□□□□ 0.31
TSPAN1-202ENST00000464786 ALDH1L1O75891 902 aa17■□□□□ 0.31
TSPAN1-202ENST00000464786 ALDH1B1P30837 517 aa17■□□□□ 0.31
TSPAN1-202ENST00000464786 GCKRQ14397 625 aa17■□□□□ 0.31
TSPAN1-202ENST00000464786 RIC1Q4ADV7 1423 aa17■□□□□ 0.31
TSPAN1-202ENST00000464786 BEND3Q5T5X7 828 aa17■□□□□ 0.31
TSPAN1-202ENST00000464786 SLC4A10Q6U841 1118 aa17■□□□□ 0.31
TSPAN1-202ENST00000464786 FAM89AQ96GI7 184 aa17■□□□□ 0.31
TSPAN1-202ENST00000464786 NOB1Q9ULX3 412 aaKnown RBP17■□□□□ 0.31
TSPAN1-202ENST00000464786 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
TSPAN1-202ENST00000464786 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
TSPAN1-202ENST00000464786 SRCIN1Q9C0H9 1055 aa16.99■□□□□ 0.31
TSPAN1-202ENST00000464786 IRS4O14654 1257 aaPredicted RBP16.98■□□□□ 0.31
TSPAN1-202ENST00000464786 HCLS1P14317 486 aaPredicted RBP16.98■□□□□ 0.31
TSPAN1-202ENST00000464786 HOXA10P31260 410 aaPredicted RBP16.98■□□□□ 0.31
TSPAN1-202ENST00000464786 CWF19L2Q2TBE0 894 aaKnown RBP16.98■□□□□ 0.31
TSPAN1-202ENST00000464786 RPGRQ92834 1020 aaKnown RBP16.98■□□□□ 0.31
TSPAN1-202ENST00000464786 RBM17Q96I25 401 aaKnown RBP16.98■□□□□ 0.31
TSPAN1-202ENST00000464786 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
TSPAN1-202ENST00000464786 BCS1LQ9Y276 419 aa16.98■□□□□ 0.31
TSPAN1-202ENST00000464786 ANKRD36CQ5JPF3 1778 aa16.97■□□□□ 0.31
TSPAN1-202ENST00000464786 ARFGEF2Q9Y6D5 1785 aa16.97■□□□□ 0.31
TSPAN1-202ENST00000464786 H7C1W4 665 aa16.97■□□□□ 0.31
TSPAN1-202ENST00000464786 SYNE4Q8N205 404 aa16.97■□□□□ 0.31
TSPAN1-202ENST00000464786 CRAMP1Q96RY5 1269 aa16.97■□□□□ 0.31
TSPAN1-202ENST00000464786 CDHR2Q9BYE9 1310 aa16.96■□□□□ 0.31
TSPAN1-202ENST00000464786 PDE8AO60658 829 aa16.96■□□□□ 0.31
TSPAN1-202ENST00000464786 BCAR3O75815 825 aa16.96■□□□□ 0.31
TSPAN1-202ENST00000464786 SF3B3Q15393 1217 aaKnown RBP16.96■□□□□ 0.31
TSPAN1-202ENST00000464786 ABCC12Q96J65 1359 aa16.96■□□□□ 0.31
TSPAN1-202ENST00000464786 CCT4P50991 539 aaKnown RBP16.95■□□□□ 0.3
TSPAN1-202ENST00000464786 RTL5Q5HYW3 569 aaPredicted RBP16.95■□□□□ 0.3
TSPAN1-202ENST00000464786 C9orf78Q9NZ63 289 aaPredicted RBP16.95■□□□□ 0.3
TSPAN1-202ENST00000464786 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
TSPAN1-202ENST00000464786 YY1P25490 414 aa16.94■□□□□ 0.3
TSPAN1-202ENST00000464786 SOGA3Q5TF21 947 aa16.94■□□□□ 0.3
TSPAN1-202ENST00000464786 ATF7IPQ6VMQ6 1270 aa16.94■□□□□ 0.3
TSPAN1-202ENST00000464786 DDX46Q7L014 1031 aaKnown RBP16.94■□□□□ 0.3
TSPAN1-202ENST00000464786 FRAT1Q92837 279 aaPredicted RBP16.94■□□□□ 0.3
TSPAN1-202ENST00000464786 ANKRD31Q8N7Z5 1873 aa16.93■□□□□ 0.3
TSPAN1-202ENST00000464786 N4BP2Q86UW6 1770 aaPredicted RBP16.93■□□□□ 0.3
TSPAN1-202ENST00000464786 GRM8O00222 908 aa16.93■□□□□ 0.3
TSPAN1-202ENST00000464786 BBOX1O75936 387 aa16.93■□□□□ 0.3
TSPAN1-202ENST00000464786 CCDC152Q4G0S7 254 aa16.93■□□□□ 0.3
TSPAN1-202ENST00000464786 ZKSCAN2Q63HK3 967 aa16.93■□□□□ 0.3
TSPAN1-202ENST00000464786 UBE3BQ7Z3V4 1068 aa16.93■□□□□ 0.3
TSPAN1-202ENST00000464786 PLA2G12BQ9BX93 195 aa16.93■□□□□ 0.3
TSPAN1-202ENST00000464786 RCAN3Q9UKA8 241 aa16.93■□□□□ 0.3
TSPAN1-202ENST00000464786 HDAC5Q9UQL6 1122 aa16.93■□□□□ 0.3
TSPAN1-202ENST00000464786 GRIPAP1Q4V328 841 aa16.92■□□□□ 0.3
TSPAN1-202ENST00000464786 CC2D2BQ6DHV5 1058 aa16.92■□□□□ 0.3
TSPAN1-202ENST00000464786 PRPF40BQ6NWY9 871 aaKnown RBP16.92■□□□□ 0.3
TSPAN1-202ENST00000464786 C3orf67Q6ZVT6 689 aa16.92■□□□□ 0.3
TSPAN1-202ENST00000464786 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
TSPAN1-202ENST00000464786 TMX4Q9H1E5 349 aaPredicted RBP16.92■□□□□ 0.3
TSPAN1-202ENST00000464786 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
TSPAN1-202ENST00000464786 MS4A1P11836 297 aa16.91■□□□□ 0.3
TSPAN1-202ENST00000464786 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
TSPAN1-202ENST00000464786 TMC4Q7Z404 712 aa16.91■□□□□ 0.3
TSPAN1-202ENST00000464786 KIAA1551Q9HCM1 1747 aa16.9■□□□□ 0.3
TSPAN1-202ENST00000464786 TRIM27P14373 513 aa16.9■□□□□ 0.3
TSPAN1-202ENST00000464786 CASP7P55210 303 aa16.9■□□□□ 0.3
TSPAN1-202ENST00000464786 CTSWP56202 376 aa16.9■□□□□ 0.3
TSPAN1-202ENST00000464786 INTS3Q68E01 1043 aaKnown RBP16.9■□□□□ 0.3
TSPAN1-202ENST00000464786 UTYO14607 1347 aa16.9■□□□□ 0.3
TSPAN1-202ENST00000464786 C21orf2O43822 256 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms