RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 NBPF5PQ86XG9 351 aaPredicted RBP15.69■□□□□ 0.1
SCAF8-205ENST00000464628 POLR2AP24928 1970 aaKnown RBP15.68■□□□□ 0.1
SCAF8-205ENST00000464628 ALDH1B1P30837 517 aa15.68■□□□□ 0.1
SCAF8-205ENST00000464628 HIRAP54198 1017 aaPredicted RBP15.68■□□□□ 0.1
SCAF8-205ENST00000464628 RGMBQ6NW40 437 aa15.68■□□□□ 0.1
SCAF8-205ENST00000464628 DLK2Q6UY11 383 aa15.67■□□□□ 0.1
SCAF8-205ENST00000464628 LARGE2Q8N3Y3 721 aa15.67■□□□□ 0.1
SCAF8-205ENST00000464628 ZNF496Q96IT1 587 aaPredicted RBP15.67■□□□□ 0.1
SCAF8-205ENST00000464628 RIC1Q4ADV7 1423 aa15.67■□□□□ 0.1
SCAF8-205ENST00000464628 NPC1L1Q9UHC9 1359 aa15.66■□□□□ 0.1
SCAF8-205ENST00000464628 DLL1O00548 723 aa15.66■□□□□ 0.1
SCAF8-205ENST00000464628 CDC37L1Q7L3B6 337 aa15.66■□□□□ 0.1
SCAF8-205ENST00000464628 DZIP3Q86Y13 1208 aaKnown RBP15.66■□□□□ 0.1
SCAF8-205ENST00000464628 TRPM4Q8TD43 1214 aa15.66■□□□□ 0.1
SCAF8-205ENST00000464628 ZC3H15Q8WU90 426 aaKnown RBP15.66■□□□□ 0.1
SCAF8-205ENST00000464628 ABCC12Q96J65 1359 aa15.65■□□□□ 0.1
SCAF8-205ENST00000464628 A1BGP04217 495 aa15.65■□□□□ 0.1
SCAF8-205ENST00000464628 PKN2Q16513 984 aaKnown RBP15.65■□□□□ 0.1
SCAF8-205ENST00000464628 CC2D2BQ6DHV5 1058 aa15.65■□□□□ 0.1
SCAF8-205ENST00000464628 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
SCAF8-205ENST00000464628 CSRNP1Q96S65 589 aa15.65■□□□□ 0.1
SCAF8-205ENST00000464628 CDHR2Q9BYE9 1310 aa15.65■□□□□ 0.1
SCAF8-205ENST00000464628 SLC10A3P09131 477 aa15.64■□□□□ 0.09
SCAF8-205ENST00000464628 GMPSP49915 693 aaPredicted RBP15.64■□□□□ 0.09
SCAF8-205ENST00000464628 CRY2Q49AN0 593 aa15.64■□□□□ 0.09
SCAF8-205ENST00000464628 CDCA8Q53HL2 280 aa15.64■□□□□ 0.09
SCAF8-205ENST00000464628 NIM1KQ8IY84 436 aa15.64■□□□□ 0.09
SCAF8-205ENST00000464628 CENPFP49454 3210 aa15.63■□□□□ 0.09
SCAF8-205ENST00000464628 CXCL9Q07325 125 aa15.63■□□□□ 0.09
SCAF8-205ENST00000464628 CLEC4GQ6UXB4 293 aa15.63■□□□□ 0.09
SCAF8-205ENST00000464628 TTC5Q8N0Z6 440 aa15.63■□□□□ 0.09
SCAF8-205ENST00000464628 CCDC102AQ96A19 550 aa15.63■□□□□ 0.09
SCAF8-205ENST00000464628 NUP98P52948 1817 aa15.62■□□□□ 0.09
SCAF8-205ENST00000464628 USP48Q86UV5 1035 aa15.62■□□□□ 0.09
SCAF8-205ENST00000464628 TEX13AQ9BXU3 409 aaPredicted RBP15.62■□□□□ 0.09
SCAF8-205ENST00000464628 GBA2Q9HCG7 927 aaPredicted RBP15.62■□□□□ 0.09
SCAF8-205ENST00000464628 IL13P35225 146 aa15.61■□□□□ 0.09
SCAF8-205ENST00000464628 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
SCAF8-205ENST00000464628 TPTE2Q6XPS3 522 aa15.61■□□□□ 0.09
SCAF8-205ENST00000464628 ZNF296Q8WUU4 475 aaPredicted RBP15.61■□□□□ 0.09
SCAF8-205ENST00000464628 SHTN1A0MZ66 631 aa15.6■□□□□ 0.09
SCAF8-205ENST00000464628 PPIP5K2O43314 1243 aa15.6■□□□□ 0.09
SCAF8-205ENST00000464628 ZNF157P51786 506 aaPredicted RBP15.6■□□□□ 0.09
SCAF8-205ENST00000464628 AOC3Q16853 763 aa15.6■□□□□ 0.09
SCAF8-205ENST00000464628 MTHFSDQ2M296 383 aaKnown RBP15.6■□□□□ 0.09
SCAF8-205ENST00000464628 FBXO46Q6PJ61 603 aaPredicted RBP15.6■□□□□ 0.09
SCAF8-205ENST00000464628 PIP4K2AP48426 406 aaPredicted RBP15.59■□□□□ 0.09
SCAF8-205ENST00000464628 GRIPAP1Q4V328 841 aa15.59■□□□□ 0.09
SCAF8-205ENST00000464628 NIP7Q9Y221 180 aaKnown RBP eCLIP15.59■□□□□ 0.09
SCAF8-205ENST00000464628 ZNF652Q9Y2D9 606 aa15.59■□□□□ 0.09
SCAF8-205ENST00000464628 LAMB4A4D0S4 1761 aa15.59■□□□□ 0.09
SCAF8-205ENST00000464628 LAMB2P55268 1798 aa15.59■□□□□ 0.09
SCAF8-205ENST00000464628 COL6A3P12111 3177 aa15.58■□□□□ 0.08
SCAF8-205ENST00000464628 FAM177BA6PVY3 158 aa15.58■□□□□ 0.08
SCAF8-205ENST00000464628 HOXA10P31260 410 aaPredicted RBP15.58■□□□□ 0.08
SCAF8-205ENST00000464628 ZNRF3Q9ULT6 936 aa15.58■□□□□ 0.08
SCAF8-205ENST00000464628 COLQQ9Y215 455 aaPredicted RBP15.58■□□□□ 0.08
SCAF8-205ENST00000464628 KIF7Q2M1P5 1343 aa15.58■□□□□ 0.08
SCAF8-205ENST00000464628 DUOX1Q9NRD9 1551 aa15.58■□□□□ 0.08
SCAF8-205ENST00000464628 POTEFA5A3E0 1075 aa15.57■□□□□ 0.08
SCAF8-205ENST00000464628 RGL2O15211 777 aa15.57■□□□□ 0.08
SCAF8-205ENST00000464628 NPM2Q86SE8 214 aaKnown RBP15.57■□□□□ 0.08
SCAF8-205ENST00000464628 RASAL3Q86YV0 1011 aa15.57■□□□□ 0.08
SCAF8-205ENST00000464628 C2orf69Q8N8R5 385 aa15.57■□□□□ 0.08
SCAF8-205ENST00000464628 HDAC9Q9UKV0 1011 aa15.57■□□□□ 0.08
SCAF8-205ENST00000464628 ADM5C9JUS6 153 aa15.56■□□□□ 0.08
SCAF8-205ENST00000464628 PPEF1O14829 653 aaPredicted RBP15.56■□□□□ 0.08
SCAF8-205ENST00000464628 LRRC37AA6NMS7 1700 aa15.55■□□□□ 0.08
SCAF8-205ENST00000464628 DDX60Q8IY21 1712 aaKnown RBP15.55■□□□□ 0.08
SCAF8-205ENST00000464628 REM2Q8IYK8 340 aaPredicted RBP15.55■□□□□ 0.08
SCAF8-205ENST00000464628 FMNL2Q96PY5 1086 aa15.55■□□□□ 0.08
SCAF8-205ENST00000464628 VPS33BQ9H267 617 aa15.55■□□□□ 0.08
SCAF8-205ENST00000464628 TBC1D8O95759 1140 aa15.54■□□□□ 0.08
SCAF8-205ENST00000464628 NOM1Q5C9Z4 860 aaKnown RBP15.54■□□□□ 0.08
SCAF8-205ENST00000464628 KRT26Q7Z3Y9 468 aa15.54■□□□□ 0.08
SCAF8-205ENST00000464628 NUTM1Q86Y26 1132 aa15.54■□□□□ 0.08
SCAF8-205ENST00000464628 BCL2L13Q9BXK5 485 aa15.54■□□□□ 0.08
SCAF8-205ENST00000464628 CNOT7Q9UIV1 285 aaKnown RBP15.54■□□□□ 0.08
SCAF8-205ENST00000464628 USP16Q9Y5T5 823 aa15.54■□□□□ 0.08
SCAF8-205ENST00000464628 PRAMEF22A3QJZ6 481 aa15.53■□□□□ 0.08
SCAF8-205ENST00000464628 EGFRP00533 1210 aa15.53■□□□□ 0.08
SCAF8-205ENST00000464628 HMOX1P09601 288 aa15.53■□□□□ 0.08
SCAF8-205ENST00000464628 HLFQ16534 295 aa15.53■□□□□ 0.08
SCAF8-205ENST00000464628 MICALL2Q8IY33 904 aa15.53■□□□□ 0.08
SCAF8-205ENST00000464628 SLC17A8Q8NDX2 589 aa15.53■□□□□ 0.08
SCAF8-205ENST00000464628 RTFDC1Q9BY42 306 aaPredicted RBP15.53■□□□□ 0.08
SCAF8-205ENST00000464628 LAMB1P07942 1786 aa15.53■□□□□ 0.08
SCAF8-205ENST00000464628 ANKRD36CQ5JPF3 1778 aa15.53■□□□□ 0.08
SCAF8-205ENST00000464628 KDM3BQ7LBC6 1761 aa15.53■□□□□ 0.08
SCAF8-205ENST00000464628 GPR25O00155 361 aa15.52■□□□□ 0.08
SCAF8-205ENST00000464628 TCERG1O14776 1098 aaKnown RBP15.52■□□□□ 0.08
SCAF8-205ENST00000464628 KCNQ3O43525 872 aa15.52■□□□□ 0.08
SCAF8-205ENST00000464628 RAD17O75943 681 aa15.52■□□□□ 0.08
SCAF8-205ENST00000464628 SAMD7Q7Z3H4 446 aa15.52■□□□□ 0.08
SCAF8-205ENST00000464628 IL17REQ8NFR9 667 aa15.52■□□□□ 0.08
SCAF8-205ENST00000464628 RPGRQ92834 1020 aaKnown RBP15.52■□□□□ 0.08
SCAF8-205ENST00000464628 CRAMP1Q96RY5 1269 aa15.52■□□□□ 0.08
SCAF8-205ENST00000464628 TRIOBPQ9H2D6 2365 aa15.51■□□□□ 0.07
SCAF8-205ENST00000464628 IBTKQ9P2D0 1353 aaPredicted RBP15.51■□□□□ 0.07
SCAF8-205ENST00000464628 YDJCA8MPS7 323 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms