RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 RAPGEF4Q8WZA2 1011 aa10.3□□□□□ -0.76
ACTB-208ENST00000464611 RILPL2Q969X0 211 aa10.3□□□□□ -0.76
ACTB-208ENST00000464611 SYAP1Q96A49 352 aaPredicted RBP10.3□□□□□ -0.76
ACTB-208ENST00000464611 GJD4Q96KN9 370 aaPredicted RBP10.3□□□□□ -0.76
ACTB-208ENST00000464611 DDX21Q9NR30 783 aaKnown RBP eCLIP10.3□□□□□ -0.76
ACTB-208ENST00000464611 SPG7Q9UQ90 795 aa10.3□□□□□ -0.76
ACTB-208ENST00000464611 TUBGCP6Q96RT7 1819 aa10.29□□□□□ -0.76
ACTB-208ENST00000464611 IL2RBP14784 551 aa10.29□□□□□ -0.76
ACTB-208ENST00000464611 NCLP19338 710 aaKnown RBP10.29□□□□□ -0.76
ACTB-208ENST00000464611 EIF2S2P20042 333 aaKnown RBP10.29□□□□□ -0.76
ACTB-208ENST00000464611 SSFA2P28290 1259 aa10.29□□□□□ -0.76
ACTB-208ENST00000464611 RBM6P78332 1123 aaKnown RBP10.29□□□□□ -0.76
ACTB-208ENST00000464611 CCDC173Q0VFZ6 552 aa10.29□□□□□ -0.76
ACTB-208ENST00000464611 HS1BP3Q53T59 392 aa10.29□□□□□ -0.76
ACTB-208ENST00000464611 TRIM44Q96DX7 344 aaPredicted RBP10.29□□□□□ -0.76
ACTB-208ENST00000464611 TMX3Q96JJ7 454 aa10.29□□□□□ -0.76
ACTB-208ENST00000464611 ZSCAN31Q96LW9 406 aaPredicted RBP10.29□□□□□ -0.76
ACTB-208ENST00000464611 TM6SF1Q9BZW5 370 aa10.29□□□□□ -0.76
ACTB-208ENST00000464611 GZF1Q9H116 711 aaPredicted RBP10.29□□□□□ -0.76
ACTB-208ENST00000464611 QTRT2Q9H974 415 aaKnown RBP10.29□□□□□ -0.76
ACTB-208ENST00000464611 LGR6Q9HBX8 967 aa10.29□□□□□ -0.76
ACTB-208ENST00000464611 ANO2Q9NQ90 1003 aa10.29□□□□□ -0.76
ACTB-208ENST00000464611 C9orf78Q9NZ63 289 aaPredicted RBP10.29□□□□□ -0.76
ACTB-208ENST00000464611 ATP6V1DQ9Y5K8 247 aa10.29□□□□□ -0.76
ACTB-208ENST00000464611 ADAMTS7Q9UKP4 1686 aa10.28□□□□□ -0.76
ACTB-208ENST00000464611 SHANK3Q9BYB0 1731 aa10.28□□□□□ -0.76
ACTB-208ENST00000464611 SGSM2O43147 1006 aa10.28□□□□□ -0.76
ACTB-208ENST00000464611 TATP17735 454 aaPredicted RBP10.28□□□□□ -0.76
ACTB-208ENST00000464611 NEXNQ0ZGT2 675 aa10.28□□□□□ -0.76
ACTB-208ENST00000464611 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
ACTB-208ENST00000464611 PHAXQ9H814 394 aaKnown RBP10.28□□□□□ -0.76
ACTB-208ENST00000464611 CHPF2Q9P2E5 772 aa10.28□□□□□ -0.76
ACTB-208ENST00000464611 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.28□□□□□ -0.76
ACTB-208ENST00000464611 WDR33Q9C0J8 1336 aaKnown RBP10.28□□□□□ -0.76
ACTB-208ENST00000464611 COL15A1P39059 1388 aa10.27□□□□□ -0.76
ACTB-208ENST00000464611 A0A0G2JS52 829 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 PHF14O94880 888 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 LETM1O95202 739 aaPredicted RBP10.27□□□□□ -0.77
ACTB-208ENST00000464611 BRD1O95696 1058 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 RXRBP28702 533 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 CLCN1P35523 988 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 OS9Q13438 667 aaPredicted RBP10.27□□□□□ -0.77
ACTB-208ENST00000464611 USHBP1Q8N6Y0 703 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 PI4K2BQ8TCG2 481 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 EVI5LQ96CN4 794 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 ECHDC1Q9NTX5 307 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 LMBRD1Q9NUN5 540 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 RAD50Q92878 1312 aa10.27□□□□□ -0.77
ACTB-208ENST00000464611 IFIT2P09913 472 aaKnown RBP10.26□□□□□ -0.77
ACTB-208ENST00000464611 G3BP1Q13283 466 aaKnown RBP eCLIP10.26□□□□□ -0.774e-44■□□□□ 9.9
ACTB-208ENST00000464611 FAM98CQ17RN3 349 aaKnown RBP10.26□□□□□ -0.77
ACTB-208ENST00000464611 MCTP1Q6DN14 999 aa10.26□□□□□ -0.77
ACTB-208ENST00000464611 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
ACTB-208ENST00000464611 KCNB2Q92953 911 aa10.26□□□□□ -0.77
ACTB-208ENST00000464611 FAM163AQ96GL9 167 aaPredicted RBP10.26□□□□□ -0.77
ACTB-208ENST00000464611 PPP1R9BQ96SB3 815 aa10.26□□□□□ -0.77
ACTB-208ENST00000464611 SH2B1Q9NRF2 756 aaPredicted RBP10.26□□□□□ -0.77
ACTB-208ENST00000464611 ERBB4Q15303 1308 aa10.26□□□□□ -0.77
ACTB-208ENST00000464611 PCDH11XQ9BZA7 1347 aa10.26□□□□□ -0.77
ACTB-208ENST00000464611 PCDH11YQ9BZA8 1340 aa10.26□□□□□ -0.77
ACTB-208ENST00000464611 ADCY9O60503 1353 aa10.26□□□□□ -0.77
ACTB-208ENST00000464611 GRM8O00222 908 aa10.25□□□□□ -0.77
ACTB-208ENST00000464611 POTEJP0CG39 1038 aa10.25□□□□□ -0.77
ACTB-208ENST00000464611 ZKSCAN1P17029 563 aaPredicted RBP10.25□□□□□ -0.77
ACTB-208ENST00000464611 PSMA5P28066 241 aa10.25□□□□□ -0.77
ACTB-208ENST00000464611 MPRIPQ6WCQ1 1025 aa10.25□□□□□ -0.77
ACTB-208ENST00000464611 IFNL2Q8IZJ0 200 aa10.25□□□□□ -0.77
ACTB-208ENST00000464611 CHMP4CQ96CF2 233 aa10.25□□□□□ -0.77
ACTB-208ENST00000464611 ALDH8A1Q9H2A2 487 aaPredicted RBP10.25□□□□□ -0.77
ACTB-208ENST00000464611 DIAPH3Q9NSV4 1193 aa10.25□□□□□ -0.77
ACTB-208ENST00000464611 RGS17Q9UGC6 210 aaPredicted RBP10.25□□□□□ -0.77
ACTB-208ENST00000464611 METRNQ9UJH8 293 aa10.25□□□□□ -0.77
ACTB-208ENST00000464611 LIMCH1Q9UPQ0 1083 aa10.25□□□□□ -0.77
ACTB-208ENST00000464611 MAP3K2Q9Y2U5 619 aa10.25□□□□□ -0.77
ACTB-208ENST00000464611 NBPF7P0C2Y1 421 aaPredicted RBP10.24□□□□□ -0.77
ACTB-208ENST00000464611 ANKRD1Q15327 319 aa10.24□□□□□ -0.77
ACTB-208ENST00000464611 DDB1Q16531 1140 aa10.24□□□□□ -0.77
ACTB-208ENST00000464611 RNF20Q5VTR2 975 aa10.24□□□□□ -0.77
ACTB-208ENST00000464611 DCAF5Q96JK2 942 aa10.24□□□□□ -0.77
ACTB-208ENST00000464611 PHF12Q96QT6 1004 aa10.24□□□□□ -0.77
ACTB-208ENST00000464611 SLC52A2Q9HAB3 445 aa10.24□□□□□ -0.77
ACTB-208ENST00000464611 SNRKQ9NRH2 765 aa10.24□□□□□ -0.77
ACTB-208ENST00000464611 SIPA1L3O60292 1781 aaPredicted RBP10.24□□□□□ -0.77
ACTB-208ENST00000464611 AK9Q5TCS8 1911 aa10.23□□□□□ -0.77
ACTB-208ENST00000464611 ONECUT3O60422 494 aaPredicted RBP10.23□□□□□ -0.77
ACTB-208ENST00000464611 SNRPA1P09661 255 aaKnown RBP10.23□□□□□ -0.77
ACTB-208ENST00000464611 NASPP49321 788 aaPredicted RBP10.23□□□□□ -0.77
ACTB-208ENST00000464611 VPS53Q5VIR6 699 aa10.23□□□□□ -0.77
ACTB-208ENST00000464611 ZNF790Q6PG37 636 aa10.23□□□□□ -0.77
ACTB-208ENST00000464611 POTEAQ6S8J7 498 aa10.23□□□□□ -0.77
ACTB-208ENST00000464611 MAMSTRQ6ZN01 415 aa10.23□□□□□ -0.77
ACTB-208ENST00000464611 LSG1Q9H089 658 aaKnown RBP10.23□□□□□ -0.77
ACTB-208ENST00000464611 IL1RAPL2Q9NP60 686 aa10.23□□□□□ -0.77
ACTB-208ENST00000464611 BRWD3Q6RI45 1802 aa10.23□□□□□ -0.77
ACTB-208ENST00000464611 RFX7Q2KHR2 1363 aa10.23□□□□□ -0.77
ACTB-208ENST00000464611 DOT1LQ8TEK3 1739 aa10.22□□□□□ -0.77
ACTB-208ENST00000464611 ESPNB1AK53 854 aa10.22□□□□□ -0.77
ACTB-208ENST00000464611 EXOC5O00471 708 aa10.22□□□□□ -0.77
ACTB-208ENST00000464611 PRPF40AO75400 957 aaKnown RBP10.22□□□□□ -0.77
ACTB-208ENST00000464611 MCM5P33992 734 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms