RNA–Protein interactions for RNA: ENST00000464581.5

CHEK2-222, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 425 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-222	ENST00000464581	PHTF2	Q8N3S3	785 aa		6.16	□□□□□ -1.42
CHEK2-222	ENST00000464581	NFATC2IP	Q8NCF5	419 aa		6.16	□□□□□ -1.42
CHEK2-222	ENST00000464581	WFDC12	Q8WWY7	111 aa		6.16	□□□□□ -1.42
CHEK2-222	ENST00000464581	ZIC5	Q96T25	663 aa		6.16	□□□□□ -1.42
CHEK2-222	ENST00000464581	CEP126	Q9P2H0	1117 aa		6.16	□□□□□ -1.42
CHEK2-222	ENST00000464581	UST	Q9Y2C2	406 aa		6.16	□□□□□ -1.42
CHEK2-222	ENST00000464581	SKI	P12755	728 aa		6.15	□□□□□ -1.42
CHEK2-222	ENST00000464581	FMR1NB	Q8N0W7	255 aa	Predicted RBP	6.15	□□□□□ -1.42
CHEK2-222	ENST00000464581	ETNK1	Q9HBU6	452 aa		6.15	□□□□□ -1.42
CHEK2-222	ENST00000464581	USP17L3	A6NCW0	530 aa		6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	USP17L4	A6NCW7	530 aa		6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	USP17L5	A8MUK1	530 aa		6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	PTCD1	O75127	700 aa	Known RBP	6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	IREB2	P48200	963 aa	Known RBP	6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	PDE4C	Q08493	712 aa		6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	USP17L2	Q6R6M4	530 aa		6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	BICDL1	Q6ZP65	573 aa		6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	USP17L1	Q7RTZ2	530 aa		6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	DEPDC4	Q8N2C3	294 aa		6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	VRTN	Q9H8Y1	702 aa		6.14	□□□□□ -1.43
CHEK2-222	ENST00000464581	GSC2	O15499	205 aa		6.13	□□□□□ -1.43
CHEK2-222	ENST00000464581	TSGA10IP	Q3SY00	556 aa		6.13	□□□□□ -1.43
CHEK2-222	ENST00000464581	PLEKHM2	Q8IWE5	1019 aa		6.13	□□□□□ -1.43
CHEK2-222	ENST00000464581	CHIC2	Q9UKJ5	165 aa		6.13	□□□□□ -1.43
CHEK2-222	ENST00000464581	ZMIZ1	Q9ULJ6	1067 aa		6.13	□□□□□ -1.43
CHEK2-222	ENST00000464581	BRD1	O95696	1058 aa		6.12	□□□□□ -1.43
CHEK2-222	ENST00000464581	KRTAP17-1	Q9BYP8	105 aa		6.12	□□□□□ -1.43
CHEK2-222	ENST00000464581	GZF1	Q9H116	711 aa	Predicted RBP	6.12	□□□□□ -1.43
CHEK2-222	ENST00000464581	USP4	Q13107	963 aa		6.11	□□□□□ -1.43
CHEK2-222	ENST00000464581	NCOA4	Q13772	614 aa		6.11	□□□□□ -1.43
CHEK2-222	ENST00000464581	ELOA	Q14241	798 aa	Known RBP	6.11	□□□□□ -1.43
CHEK2-222	ENST00000464581	SLFNL1	Q499Z3	407 aa		6.11	□□□□□ -1.43
CHEK2-222	ENST00000464581	CRTC2	Q53ET0	693 aa	Predicted RBP	6.11	□□□□□ -1.43
CHEK2-222	ENST00000464581	DTWD1	Q8N5C7	304 aa		6.11	□□□□□ -1.43
CHEK2-222	ENST00000464581	PLPP7	Q8NBV4	271 aa		6.11	□□□□□ -1.43
CHEK2-222	ENST00000464581	STK32A	Q8WU08	396 aa		6.11	□□□□□ -1.43
CHEK2-222	ENST00000464581	JPH1	Q9HDC5	661 aa	Predicted RBP	6.11	□□□□□ -1.43
CHEK2-222	ENST00000464581	MKRN1	Q9UHC7	482 aa	Known RBP	6.11	□□□□□ -1.43
CHEK2-222	ENST00000464581	NOS3	P29474	1203 aa		6.1	□□□□□ -1.43
CHEK2-222	ENST00000464581	TMEM164	Q5U3C3	297 aa		6.1	□□□□□ -1.43
CHEK2-222	ENST00000464581	MEGF10	Q96KG7	1140 aa		6.1	□□□□□ -1.43
CHEK2-222	ENST00000464581	CDCA7	Q9BWT1	371 aa	Predicted RBP	6.1	□□□□□ -1.43
CHEK2-222	ENST00000464581	SLAIN2	Q9P270	581 aa		6.1	□□□□□ -1.43
CHEK2-222	ENST00000464581	CCDC9	Q9Y3X0	531 aa	Known RBP	6.1	□□□□□ -1.43
CHEK2-222	ENST00000464581	GRIK1	P39086	918 aa		6.09	□□□□□ -1.43
CHEK2-222	ENST00000464581	SPEM2	Q0P670	501 aa		6.09	□□□□□ -1.43
CHEK2-222	ENST00000464581	PTK7	Q13308	1070 aa		6.09	□□□□□ -1.43
CHEK2-222	ENST00000464581	LCE4A	Q5TA78	99 aa		6.09	□□□□□ -1.43
CHEK2-222	ENST00000464581	SIRT1	Q96EB6	747 aa		6.09	□□□□□ -1.43
CHEK2-222	ENST00000464581	CCDC85A	Q96PX6	553 aa	Predicted RBP	6.09	□□□□□ -1.43
CHEK2-222	ENST00000464581	SLC30A3	Q99726	388 aa		6.09	□□□□□ -1.43
CHEK2-222	ENST00000464581	NOVA2	Q9UNW9	492 aa	Known RBP	6.09	□□□□□ -1.43
CHEK2-222	ENST00000464581	FAM196B	A6NMK8	535 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L15	C9J2P7	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L10	C9JJH3	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L13	C9JLJ4	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L12	C9JPN9	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L11	C9JVI0	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L21	D6R901	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L18	D6R9N7	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L22	D6RA61	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L17	D6RBQ6	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L19	D6RCP7	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L20	D6RJB6	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	MED26	O95402	600 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	INHA	P05111	366 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	C8A	P07357	584 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	SMTN	P53814	917 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	KCNA1	Q09470	495 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	USP17L24	Q0WX57	530 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	OGFOD2	Q6N063	350 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	INTS5	Q6P9B9	1019 aa	Known RBP	6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	DMRTC2	Q8IXT2	367 aa	Predicted RBP	6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	NEUROD4	Q9HD90	331 aa		6.08	□□□□□ -1.44
CHEK2-222	ENST00000464581	LZTS3	O60299	673 aa	Predicted RBP	6.07	□□□□□ -1.44
CHEK2-222	ENST00000464581	RASA1	P20936	1047 aa		6.07	□□□□□ -1.44
CHEK2-222	ENST00000464581	FAM69C	Q0P6D2	419 aa		6.07	□□□□□ -1.44
CHEK2-222	ENST00000464581	MAP7D1	Q3KQU3	841 aa		6.07	□□□□□ -1.44
CHEK2-222	ENST00000464581	PHLDB3	Q6NSJ2	640 aa		6.07	□□□□□ -1.44
CHEK2-222	ENST00000464581	IGF2-AS	Q6U949	168 aa		6.07	□□□□□ -1.44
CHEK2-222	ENST00000464581	POU5F2	Q8N7G0	328 aa		6.07	□□□□□ -1.44
CHEK2-222	ENST00000464581	CDK2AP1	O14519	115 aa		6.06	□□□□□ -1.44
CHEK2-222	ENST00000464581	ZBTB7B	O15156	539 aa	Predicted RBP	6.06	□□□□□ -1.44
CHEK2-222	ENST00000464581	DKK1	O94907	266 aa		6.06	□□□□□ -1.44
CHEK2-222	ENST00000464581	STAU1	O95793	577 aa	Known RBP	6.06	□□□□□ -1.44
CHEK2-222	ENST00000464581	GDF10	P55107	478 aa		6.06	□□□□□ -1.44
CHEK2-222	ENST00000464581	CLDN10	P78369	228 aa		6.06	□□□□□ -1.44
CHEK2-222	ENST00000464581	FBXO11	Q86XK2	927 aa		6.06	□□□□□ -1.44
CHEK2-222	ENST00000464581	CABP1	Q9NZU7	370 aa		6.06	□□□□□ -1.44
CHEK2-222	ENST00000464581	GPC6	Q9Y625	555 aa	Predicted RBP	6.06	□□□□□ -1.44
CHEK2-222	ENST00000464581	WNT11	O96014	354 aa		6.05	□□□□□ -1.44
CHEK2-222	ENST00000464581	TGFB1	P01137	390 aa		6.05	□□□□□ -1.44
CHEK2-222	ENST00000464581	AFF1	P51825	1210 aa	Known RBP	6.05	□□□□□ -1.44
CHEK2-222	ENST00000464581	SFSWAP	Q12872	951 aa	Known RBP	6.05	□□□□□ -1.44
CHEK2-222	ENST00000464581	EML3	Q32P44	896 aa		6.05	□□□□□ -1.44
CHEK2-222	ENST00000464581	TMCO4	Q5TGY1	634 aa		6.05	□□□□□ -1.44
CHEK2-222	ENST00000464581	LARP1	Q6PKG0	1096 aa	Known RBP	6.05	□□□□□ -1.44
CHEK2-222	ENST00000464581	DZIP1L	Q8IYY4	767 aa	Known RBP	6.05	□□□□□ -1.44
CHEK2-222	ENST00000464581	OGFOD1	Q8N543	542 aa		6.05	□□□□□ -1.44
CHEK2-222	ENST00000464581	RGS22	Q8NE09	1264 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms