RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 UTP14AQ9BVJ6 771 aaKnown RBP19.73■□□□□ 0.75
RAB11FIP3-208ENST00000464263 PIM2Q9P1W9 311 aa19.73■□□□□ 0.75
RAB11FIP3-208ENST00000464263 PDZRN3Q9UPQ7 1066 aa19.73■□□□□ 0.75
RAB11FIP3-208ENST00000464263 MAP3K2Q9Y2U5 619 aa19.73■□□□□ 0.75
RAB11FIP3-208ENST00000464263 COL11A2P13942 1736 aaPredicted RBP19.73■□□□□ 0.75
RAB11FIP3-208ENST00000464263 ZNF428Q96B54 188 aa19.72■□□□□ 0.75
RAB11FIP3-208ENST00000464263 ZBED9Q6R2W3 1325 aa19.72■□□□□ 0.75
RAB11FIP3-208ENST00000464263 ABCC12Q96J65 1359 aa19.71■□□□□ 0.75
RAB11FIP3-208ENST00000464263 SRGNP10124 158 aa19.71■□□□□ 0.75
RAB11FIP3-208ENST00000464263 SLC10A5Q5PT55 438 aa19.71■□□□□ 0.75
RAB11FIP3-208ENST00000464263 MYD88Q99836 296 aa19.71■□□□□ 0.75
RAB11FIP3-208ENST00000464263 ARFGEF1Q9Y6D6 1849 aa19.71■□□□□ 0.75
RAB11FIP3-208ENST00000464263 CT47B1P0C2W7 299 aaPredicted RBP19.7■□□□□ 0.74
RAB11FIP3-208ENST00000464263 FKBP5Q13451 457 aaPredicted RBP19.7■□□□□ 0.74
RAB11FIP3-208ENST00000464263 SYNE4Q8N205 404 aa19.7■□□□□ 0.74
RAB11FIP3-208ENST00000464263 MRPL50Q8N5N7 158 aaKnown RBP19.7■□□□□ 0.74
RAB11FIP3-208ENST00000464263 SSH1Q8WYL5 1049 aa19.7■□□□□ 0.74
RAB11FIP3-208ENST00000464263 TRMT112Q9UI30 125 aaKnown RBP19.7■□□□□ 0.74
RAB11FIP3-208ENST00000464263 TNRC6CQ9HCJ0 1690 aaKnown RBP19.7■□□□□ 0.74
RAB11FIP3-208ENST00000464263 RNF123Q5XPI4 1314 aa19.7■□□□□ 0.74
RAB11FIP3-208ENST00000464263 RIC1Q4ADV7 1423 aa19.69■□□□□ 0.74
RAB11FIP3-208ENST00000464263 GRIN3BO60391 1043 aa19.69■□□□□ 0.74
RAB11FIP3-208ENST00000464263 BCS1LQ9Y276 419 aa19.69■□□□□ 0.74
RAB11FIP3-208ENST00000464263 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
RAB11FIP3-208ENST00000464263 ALDH1L2Q3SY69 923 aa19.68■□□□□ 0.74
RAB11FIP3-208ENST00000464263 DALRD3Q5D0E6 543 aaKnown RBP19.68■□□□□ 0.74
RAB11FIP3-208ENST00000464263 CCDC191Q8NCU4 936 aa19.68■□□□□ 0.74
RAB11FIP3-208ENST00000464263 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.74
RAB11FIP3-208ENST00000464263 CHD4Q14839 1912 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 CRY2Q49AN0 593 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 STYK1Q6J9G0 422 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 TTLL6Q8N841 843 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 FAM89AQ96GI7 184 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 MASTLQ96GX5 879 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 SH3TC1Q8TE82 1336 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 LAMB2P55268 1798 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 UTRNP46939 3433 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 SLX4Q8IY92 1834 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 CACNA1SQ13698 1873 aa19.67■□□□□ 0.74
RAB11FIP3-208ENST00000464263 DDX60Q8IY21 1712 aaKnown RBP19.66■□□□□ 0.74
RAB11FIP3-208ENST00000464263 DNAAF4Q8WXU2 420 aa19.66■□□□□ 0.74
RAB11FIP3-208ENST00000464263 F6X3S4 739 aa19.65■□□□□ 0.74
RAB11FIP3-208ENST00000464263 NPR1P16066 1061 aa19.65■□□□□ 0.74
RAB11FIP3-208ENST00000464263 NEXNQ0ZGT2 675 aa19.65■□□□□ 0.74
RAB11FIP3-208ENST00000464263 C3orf67Q6ZVT6 689 aa19.65■□□□□ 0.74
RAB11FIP3-208ENST00000464263 ZBTB38Q8NAP3 1195 aaPredicted RBP19.65■□□□□ 0.74
RAB11FIP3-208ENST00000464263 NLRP3Q96P20 1036 aa19.65■□□□□ 0.74
RAB11FIP3-208ENST00000464263 CWC25Q9NXE8 425 aaPredicted RBP19.65■□□□□ 0.74
RAB11FIP3-208ENST00000464263 NEURL1BA8MQ27 555 aa19.64■□□□□ 0.73
RAB11FIP3-208ENST00000464263 HCLS1P14317 486 aaPredicted RBP19.64■□□□□ 0.73
RAB11FIP3-208ENST00000464263 CWF19L2Q2TBE0 894 aaKnown RBP19.64■□□□□ 0.73
RAB11FIP3-208ENST00000464263 CNKSR1Q969H4 720 aa19.64■□□□□ 0.73
RAB11FIP3-208ENST00000464263 BCL2L13Q9BXK5 485 aa19.64■□□□□ 0.73
RAB11FIP3-208ENST00000464263 PCCAP05165 728 aaPredicted RBP19.63■□□□□ 0.73
RAB11FIP3-208ENST00000464263 HOXA10P31260 410 aaPredicted RBP19.63■□□□□ 0.73
RAB11FIP3-208ENST00000464263 RARSP54136 660 aaKnown RBP19.63■□□□□ 0.73
RAB11FIP3-208ENST00000464263 BRPF1P55201 1214 aaPredicted RBP19.63■□□□□ 0.73
RAB11FIP3-208ENST00000464263 RTL5Q5HYW3 569 aaPredicted RBP19.63■□□□□ 0.73
RAB11FIP3-208ENST00000464263 BEND3Q5T5X7 828 aa19.62■□□□□ 0.73
RAB11FIP3-208ENST00000464263 LINS1Q8NG48 757 aa19.62■□□□□ 0.73
RAB11FIP3-208ENST00000464263 SMC4Q9NTJ3 1288 aa19.62■□□□□ 0.73
RAB11FIP3-208ENST00000464263 PTPRCP08575 1304 aa19.61■□□□□ 0.73
RAB11FIP3-208ENST00000464263 IRS4O14654 1257 aaPredicted RBP19.61■□□□□ 0.73
RAB11FIP3-208ENST00000464263 ALDH1B1P30837 517 aa19.61■□□□□ 0.73
RAB11FIP3-208ENST00000464263 JARID2Q92833 1246 aaPredicted RBP19.61■□□□□ 0.73
RAB11FIP3-208ENST00000464263 H7C1W4 665 aa19.6■□□□□ 0.73
RAB11FIP3-208ENST00000464263 GCKRQ14397 625 aa19.6■□□□□ 0.73
RAB11FIP3-208ENST00000464263 PRPF40BQ6NWY9 871 aaKnown RBP19.6■□□□□ 0.73
RAB11FIP3-208ENST00000464263 ARHGAP27Q6ZUM4 889 aa19.6■□□□□ 0.73
RAB11FIP3-208ENST00000464263 C7orf43Q8WVR3 580 aa19.6■□□□□ 0.73
RAB11FIP3-208ENST00000464263 RPGRQ92834 1020 aaKnown RBP19.6■□□□□ 0.73
RAB11FIP3-208ENST00000464263 CRAMP1Q96RY5 1269 aa19.6■□□□□ 0.73
RAB11FIP3-208ENST00000464263 TAF1P21675 1872 aa19.59■□□□□ 0.73
RAB11FIP3-208ENST00000464263 SF3B3Q15393 1217 aaKnown RBP19.59■□□□□ 0.73
RAB11FIP3-208ENST00000464263 CDHR2Q9BYE9 1310 aa19.58■□□□□ 0.73
RAB11FIP3-208ENST00000464263 C21orf2O43822 256 aa19.58■□□□□ 0.72
RAB11FIP3-208ENST00000464263 RBM17Q96I25 401 aaKnown RBP19.58■□□□□ 0.72
RAB11FIP3-208ENST00000464263 SBF1O95248 1867 aa19.58■□□□□ 0.72
RAB11FIP3-208ENST00000464263 FER1L6Q2WGJ9 1857 aa19.57■□□□□ 0.72
RAB11FIP3-208ENST00000464263 CASP7P55210 303 aa19.57■□□□□ 0.72
RAB11FIP3-208ENST00000464263 SLC4A10Q6U841 1118 aa19.57■□□□□ 0.72
RAB11FIP3-208ENST00000464263 NOB1Q9ULX3 412 aaKnown RBP19.57■□□□□ 0.72
RAB11FIP3-208ENST00000464263 MYH3P11055 1940 aa19.57■□□□□ 0.72
RAB11FIP3-208ENST00000464263 PDE8AO60658 829 aa19.56■□□□□ 0.72
RAB11FIP3-208ENST00000464263 ALDH1L1O75891 902 aa19.56■□□□□ 0.72
RAB11FIP3-208ENST00000464263 HSP90B1P14625 803 aaKnown RBP19.56■□□□□ 0.72
RAB11FIP3-208ENST00000464263 ZNF219Q9P2Y4 722 aaPredicted RBP19.56■□□□□ 0.72
RAB11FIP3-208ENST00000464263 CCDC88AQ3V6T2 1871 aa19.56■□□□□ 0.72
RAB11FIP3-208ENST00000464263 BCAR3O75815 825 aa19.55■□□□□ 0.72
RAB11FIP3-208ENST00000464263 UBE3BQ7Z3V4 1068 aa19.55■□□□□ 0.72
RAB11FIP3-208ENST00000464263 SRCIN1Q9C0H9 1055 aa19.55■□□□□ 0.72
RAB11FIP3-208ENST00000464263 ABCC4O15439 1325 aa19.54■□□□□ 0.72
RAB11FIP3-208ENST00000464263 DDX46Q7L014 1031 aaKnown RBP19.54■□□□□ 0.72
RAB11FIP3-208ENST00000464263 OLFM4Q6UX06 510 aa19.53■□□□□ 0.72
RAB11FIP3-208ENST00000464263 ARHGAP45Q92619 1136 aa19.53■□□□□ 0.72
RAB11FIP3-208ENST00000464263 NFKBIEO00221 500 aa19.52■□□□□ 0.72
RAB11FIP3-208ENST00000464263 GRM8O00222 908 aa19.52■□□□□ 0.72
RAB11FIP3-208ENST00000464263 BBOX1O75936 387 aa19.52■□□□□ 0.72
RAB11FIP3-208ENST00000464263 SOGA3Q5TF21 947 aa19.52■□□□□ 0.72
RAB11FIP3-208ENST00000464263 PLA2G12BQ9BX93 195 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms