RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 TCIRG1Q13488 830 aa9.59□□□□□ -0.87
THUMPD3-208ENST00000464045 CRY2Q49AN0 593 aa9.59□□□□□ -0.87
THUMPD3-208ENST00000464045 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
THUMPD3-208ENST00000464045 C16orf71Q8IYS4 520 aaPredicted RBP9.59□□□□□ -0.87
THUMPD3-208ENST00000464045 TSR2Q969E8 191 aaKnown RBP9.59□□□□□ -0.87
THUMPD3-208ENST00000464045 FANCIQ9NVI1 1328 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 ANKRD31Q8N7Z5 1873 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 TOMM70O94826 608 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 NTSR2O95665 410 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 GPTP24298 496 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 APLP1P51693 650 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 GOLGA2Q08379 1002 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 SOGA3Q5TF21 947 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 SUSD4Q5VX71 490 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 ZNF622Q969S3 477 aaKnown RBP eCLIP9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 UTP14AQ9BVJ6 771 aaKnown RBP9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 MYH16Q9H6N6 1097 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 RRAGCQ9HB90 399 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 NUP98P52948 1817 aa9.58□□□□□ -0.88
THUMPD3-208ENST00000464045 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 ELL2O00472 640 aaPredicted RBP9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 DDX58O95786 925 aaKnown RBP9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 ALDH1B1P30837 517 aa9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 TRIM28Q13263 835 aaKnown RBP9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 TWISTNBQ3B726 338 aaPredicted RBP9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 ERFEQ4G0M1 354 aa9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 SLC10A5Q5PT55 438 aa9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 NLRP10Q86W26 655 aa9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 TSPYL6Q8N831 410 aa9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 STK31Q9BXU1 1019 aa9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 ZNF219Q9P2Y4 722 aaPredicted RBP9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 ABCC12Q96J65 1359 aa9.57□□□□□ -0.88
THUMPD3-208ENST00000464045 ZNF521Q96K83 1311 aa9.56□□□□□ -0.88
THUMPD3-208ENST00000464045 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
THUMPD3-208ENST00000464045 COL11A2P13942 1736 aaPredicted RBP9.56□□□□□ -0.88
THUMPD3-208ENST00000464045 HOXA10P31260 410 aaPredicted RBP9.56□□□□□ -0.88
THUMPD3-208ENST00000464045 PRPF40BQ6NWY9 871 aaKnown RBP9.56□□□□□ -0.88
THUMPD3-208ENST00000464045 NUTM1Q86Y26 1132 aa9.56□□□□□ -0.88
THUMPD3-208ENST00000464045 ISCA1Q9BUE6 129 aa9.56□□□□□ -0.88
THUMPD3-208ENST00000464045 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
THUMPD3-208ENST00000464045 SH3TC1Q8TE82 1336 aa9.56□□□□□ -0.88
THUMPD3-208ENST00000464045 LTBP3Q9NS15 1303 aa9.56□□□□□ -0.88
THUMPD3-208ENST00000464045 CAPN15O75808 1086 aa9.55□□□□□ -0.88
THUMPD3-208ENST00000464045 LMNB1P20700 586 aa9.55□□□□□ -0.88
THUMPD3-208ENST00000464045 GRIPAP1Q4V328 841 aa9.55□□□□□ -0.88
THUMPD3-208ENST00000464045 RIC3Q7Z5B4 369 aa9.55□□□□□ -0.88
THUMPD3-208ENST00000464045 DNAJC5GQ8N7S2 189 aa9.55□□□□□ -0.88
THUMPD3-208ENST00000464045 C7orf43Q8WVR3 580 aa9.55□□□□□ -0.88
THUMPD3-208ENST00000464045 RPGRQ92834 1020 aaKnown RBP9.55□□□□□ -0.88
THUMPD3-208ENST00000464045 NLRP3Q96P20 1036 aa9.55□□□□□ -0.88
THUMPD3-208ENST00000464045 PHAXQ9H814 394 aaKnown RBP9.55□□□□□ -0.88
THUMPD3-208ENST00000464045 SBF1O95248 1867 aa9.55□□□□□ -0.88
THUMPD3-208ENST00000464045 NFKBIEO00221 500 aa9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 C21orf2O43822 256 aa9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 VAMP4O75379 141 aa9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 HSP90B1P14625 803 aaKnown RBP9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 CCDC93Q567U6 631 aa9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 DIEXFQ68CQ4 756 aaKnown RBP9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 CC2D2BQ6DHV5 1058 aa9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 RBM17Q96I25 401 aaKnown RBP9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 CRAMP1Q96RY5 1269 aa9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 TRMT112Q9UI30 125 aaKnown RBP9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 ANKRD36CQ5JPF3 1778 aa9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 ARFGEF2Q9Y6D5 1785 aa9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 KDM2BQ8NHM5 1336 aa9.54□□□□□ -0.88
THUMPD3-208ENST00000464045 WDR90Q96KV7 1748 aa9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 CCDC88AQ3V6T2 1871 aa9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 TNRC6CQ9HCJ0 1690 aaKnown RBP9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 E9PSI1 815 aa9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 SLC4A2P04920 1241 aa9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 PRELPP51888 382 aa9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 EXOSC9Q06265 439 aaKnown RBP9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 KSR2Q6VAB6 950 aa9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 RTKN2Q8IZC4 609 aa9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 CCDC191Q8NCU4 936 aa9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 METTL22Q9BUU2 404 aaPredicted RBP9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 TAOK3Q9H2K8 898 aa9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 SPINK5Q9NQ38 1064 aaPredicted RBP9.53□□□□□ -0.88
THUMPD3-208ENST00000464045 ATP5J2-PTCD1G3V325 749 aa9.52□□□□□ -0.89
THUMPD3-208ENST00000464045 ZBTB38Q8NAP3 1195 aaPredicted RBP9.52□□□□□ -0.89
THUMPD3-208ENST00000464045 PI4KAP2A4QPH2 592 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 PCCAP05165 728 aaPredicted RBP9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 HCLS1P14317 486 aaPredicted RBP9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 FKBP4Q02790 459 aaKnown RBP eCLIP9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 NEXNQ0ZGT2 675 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 FLIIQ13045 1269 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 COL13A1Q5TAT6 717 aaPredicted RBP9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 CHRDL2Q6WN34 429 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 C3orf67Q6ZVT6 689 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 TMC4Q7Z404 712 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 PI4KAP1Q8N8J0 262 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 ZNF428Q96B54 188 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 KLRG1Q96E93 195 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 PSMD1Q99460 953 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 MYD88Q99836 296 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 CWC25Q9NXE8 425 aaPredicted RBP9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 MAP3K2Q9Y2U5 619 aa9.51□□□□□ -0.89
THUMPD3-208ENST00000464045 SLX4Q8IY92 1834 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms