RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 TMOD3Q9NYL9 352 aa21.18■□□□□ 0.98
LMO2-204ENST00000464025 TMX3Q96JJ7 454 aa21.17■□□□□ 0.98
LMO2-204ENST00000464025 BTG4Q9NY30 223 aa21.17■□□□□ 0.98
LMO2-204ENST00000464025 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.17■□□□□ 0.98
LMO2-204ENST00000464025 ATP5J2-PTCD1G3V325 749 aa21.16■□□□□ 0.98
LMO2-204ENST00000464025 PTCD1O75127 700 aaKnown RBP21.16■□□□□ 0.98
LMO2-204ENST00000464025 A1BGP04217 495 aa21.16■□□□□ 0.98
LMO2-204ENST00000464025 TTLL7Q6ZT98 887 aa21.16■□□□□ 0.98
LMO2-204ENST00000464025 WNK3Q9BYP7 1800 aa21.16■□□□□ 0.98
LMO2-204ENST00000464025 SSFA2P28290 1259 aa21.15■□□□□ 0.98
LMO2-204ENST00000464025 FOXO4P98177 505 aa21.15■□□□□ 0.98
LMO2-204ENST00000464025 CWC27Q6UX04 472 aaKnown RBP21.15■□□□□ 0.98
LMO2-204ENST00000464025 COL16A1Q07092 1604 aaPredicted RBP21.15■□□□□ 0.98
LMO2-204ENST00000464025 TRIM28Q13263 835 aaKnown RBP21.14■□□□□ 0.98
LMO2-204ENST00000464025 CCDC8Q9H0W5 538 aaPredicted RBP21.14■□□□□ 0.98
LMO2-204ENST00000464025 ATG3Q9NT62 314 aa21.14■□□□□ 0.98
LMO2-204ENST00000464025 RFX7Q2KHR2 1363 aa21.14■□□□□ 0.97
LMO2-204ENST00000464025 ATP5JP18859 108 aa21.14■□□□□ 0.97
LMO2-204ENST00000464025 TICAM2Q86XR7 235 aa21.14■□□□□ 0.97
LMO2-204ENST00000464025 SIL1Q9H173 461 aa21.14■□□□□ 0.97
LMO2-204ENST00000464025 SNX14Q9Y5W7 946 aa21.14■□□□□ 0.97
LMO2-204ENST00000464025 GOLGA6L22H0YM25 854 aa21.13■□□□□ 0.97
LMO2-204ENST00000464025 TNNI3KQ59H18 835 aa21.13■□□□□ 0.97
LMO2-204ENST00000464025 KLHDC4Q8TBB5 520 aa21.13■□□□□ 0.97
LMO2-204ENST00000464025 ISCA1Q9BUE6 129 aa21.13■□□□□ 0.97
LMO2-204ENST00000464025 GPR108Q9NPR9 543 aa21.13■□□□□ 0.97
LMO2-204ENST00000464025 FPGT-TNNI3KV9GXZ4 949 aa21.13■□□□□ 0.97
LMO2-204ENST00000464025 BAG4O95429 457 aaKnown RBP21.12■□□□□ 0.97
LMO2-204ENST00000464025 PIGBQ92521 554 aa21.12■□□□□ 0.97
LMO2-204ENST00000464025 TM6SF1Q9BZW5 370 aa21.12■□□□□ 0.97
LMO2-204ENST00000464025 TLR7Q9NYK1 1049 aaKnown RBP21.12■□□□□ 0.97
LMO2-204ENST00000464025 ISY1Q9ULR0 285 aaKnown RBP21.12■□□□□ 0.97
LMO2-204ENST00000464025 L1TD1Q5T7N2 865 aaKnown RBP21.11■□□□□ 0.97
LMO2-204ENST00000464025 LMBR1LQ6UX01 489 aa21.11■□□□□ 0.97
LMO2-204ENST00000464025 ZGPATQ8N5A5 531 aaKnown RBP21.11■□□□□ 0.97
LMO2-204ENST00000464025 BCL9O00512 1426 aa21.11■□□□□ 0.97
LMO2-204ENST00000464025 FSD2A1L4K1 749 aa21.1■□□□□ 0.97
LMO2-204ENST00000464025 TCIRG1Q13488 830 aa21.1■□□□□ 0.97
LMO2-204ENST00000464025 TTC14Q96N46 770 aa21.1■□□□□ 0.97
LMO2-204ENST00000464025 TFCP2Q12800 502 aa21.1■□□□□ 0.97
LMO2-204ENST00000464025 JARID2Q92833 1246 aaPredicted RBP21.1■□□□□ 0.97
LMO2-204ENST00000464025 DBNLQ9UJU6 430 aaKnown RBP21.1■□□□□ 0.97
LMO2-204ENST00000464025 CCDC171Q6TFL3 1326 aa21.09■□□□□ 0.97
LMO2-204ENST00000464025 JCADQ9P266 1359 aa21.09■□□□□ 0.97
LMO2-204ENST00000464025 STARD3NLO95772 234 aa21.09■□□□□ 0.97
LMO2-204ENST00000464025 NECTIN1Q15223 517 aa21.09■□□□□ 0.97
LMO2-204ENST00000464025 CDCA7Q9BWT1 371 aaPredicted RBP21.09■□□□□ 0.97
LMO2-204ENST00000464025 FBXO3Q9UK99 471 aa21.09■□□□□ 0.97
LMO2-204ENST00000464025 LTBP4Q8N2S1 1624 aa21.08■□□□□ 0.97
LMO2-204ENST00000464025 CIAO1O76071 339 aa21.08■□□□□ 0.97
LMO2-204ENST00000464025 RASEFQ8IZ41 740 aa21.08■□□□□ 0.97
LMO2-204ENST00000464025 MAP4K1Q92918 833 aa21.08■□□□□ 0.97
LMO2-204ENST00000464025 PLA2G12BQ9BX93 195 aa21.08■□□□□ 0.97
LMO2-204ENST00000464025 BOLA2Q9H3K6 86 aa21.08■□□□□ 0.97
LMO2-204ENST00000464025 ZDHHC9Q9Y397 364 aa21.08■□□□□ 0.97
LMO2-204ENST00000464025 IL15P40933 162 aaPredicted RBP21.07■□□□□ 0.96
LMO2-204ENST00000464025 UPF3BQ9BZI7 483 aaKnown RBP21.07■□□□□ 0.96
LMO2-204ENST00000464025 ZBTB3Q9H5J0 574 aa21.07■□□□□ 0.96
LMO2-204ENST00000464025 ASAP1Q9ULH1 1129 aa21.07■□□□□ 0.96
LMO2-204ENST00000464025 MED23Q9ULK4 1368 aa21.07■□□□□ 0.96
LMO2-204ENST00000464025 PTH1RQ03431 593 aa21.06■□□□□ 0.96
LMO2-204ENST00000464025 NMIQ13287 307 aaPredicted RBP21.06■□□□□ 0.96
LMO2-204ENST00000464025 ATG9AQ7Z3C6 839 aa21.06■□□□□ 0.96
LMO2-204ENST00000464025 EXOC5O00471 708 aa21.06■□□□□ 0.96
LMO2-204ENST00000464025 DNAJC10Q8IXB1 793 aa21.06■□□□□ 0.96
LMO2-204ENST00000464025 HAUS7Q99871 368 aa21.06■□□□□ 0.96
LMO2-204ENST00000464025 FSD1Q9BTV5 496 aa21.06■□□□□ 0.96
LMO2-204ENST00000464025 ZSWIM6Q9HCJ5 1215 aa21.06■□□□□ 0.96
LMO2-204ENST00000464025 NRAPQ86VF7 1730 aa21.05■□□□□ 0.96
LMO2-204ENST00000464025 BRD1O95696 1058 aa21.05■□□□□ 0.96
LMO2-204ENST00000464025 PCCAP05165 728 aaPredicted RBP21.05■□□□□ 0.96
LMO2-204ENST00000464025 KIF6Q6ZMV9 814 aa21.05■□□□□ 0.96
LMO2-204ENST00000464025 AEBP2Q6ZN18 517 aaPredicted RBP21.05■□□□□ 0.96
LMO2-204ENST00000464025 ANKRD36CQ5JPF3 1778 aa21.04■□□□□ 0.96
LMO2-204ENST00000464025 EYA2O00167 538 aa21.04■□□□□ 0.96
LMO2-204ENST00000464025 PKP1Q13835 747 aa21.04■□□□□ 0.96
LMO2-204ENST00000464025 KLHL40Q2TBA0 621 aa21.04■□□□□ 0.96
LMO2-204ENST00000464025 VPS53Q5VIR6 699 aa21.04■□□□□ 0.96
LMO2-204ENST00000464025 FAM227BQ96M60 508 aa21.04■□□□□ 0.96
LMO2-204ENST00000464025 THRAP3Q9Y2W1 955 aaKnown RBP21.04■□□□□ 0.96
LMO2-204ENST00000464025 SPEF2Q9C093 1822 aa21.04■□□□□ 0.96
LMO2-204ENST00000464025 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.04■□□□□ 0.96
LMO2-204ENST00000464025 MAP3K15Q6ZN16 1313 aa21.03■□□□□ 0.96
LMO2-204ENST00000464025 TSGA10IPQ3SY00 556 aa21.03■□□□□ 0.96
LMO2-204ENST00000464025 LIMCH1Q9UPQ0 1083 aa21.03■□□□□ 0.96
LMO2-204ENST00000464025 GOLGA6L3A6NEY3 463 aa21.02■□□□□ 0.96
LMO2-204ENST00000464025 ZKSCAN1P17029 563 aaPredicted RBP21.02■□□□□ 0.96
LMO2-204ENST00000464025 HSP90AB3PQ58FF7 597 aa21.02■□□□□ 0.96
LMO2-204ENST00000464025 GIGYF2Q6Y7W6 1299 aaKnown RBP21.02■□□□□ 0.96
LMO2-204ENST00000464025 DBNDD2Q9BQY9 259 aa21.02■□□□□ 0.96
LMO2-204ENST00000464025 RBM8AQ9Y5S9 174 aaKnown RBP21.02■□□□□ 0.96
LMO2-204ENST00000464025 CDHR2Q9BYE9 1310 aa21.02■□□□□ 0.95
LMO2-204ENST00000464025 A0A0D9SFI3 127 aa21.02■□□□□ 0.95
LMO2-204ENST00000464025 AK2P54819 239 aa21.02■□□□□ 0.95
LMO2-204ENST00000464025 RNF20Q5VTR2 975 aa21.02■□□□□ 0.95
LMO2-204ENST00000464025 CREB3L3Q68CJ9 461 aa21.02■□□□□ 0.95
LMO2-204ENST00000464025 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.02■□□□□ 0.95
LMO2-204ENST00000464025 ALDH8A1Q9H2A2 487 aaPredicted RBP21.02■□□□□ 0.95
LMO2-204ENST00000464025 HMG20BQ9P0W2 317 aa21.02■□□□□ 0.95
LMO2-204ENST00000464025 RPAP1Q9BWH6 1393 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms