RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 DDX21Q9NR30 783 aaKnown RBP eCLIP15.5■□□□□ 0.07
RTCB-202ENST00000463455 DICER1Q9UPY3 1922 aaKnown RBP15.5■□□□□ 0.07
RTCB-202ENST00000463455 UBN2Q6ZU65 1347 aa15.49■□□□□ 0.07
RTCB-202ENST00000463455 TIAM2Q8IVF5 1701 aa15.49■□□□□ 0.07
RTCB-202ENST00000463455 ZNF853P0CG23 659 aa15.49■□□□□ 0.07
RTCB-202ENST00000463455 HSPA6P17066 643 aa15.49■□□□□ 0.07
RTCB-202ENST00000463455 NMRK2Q9NPI5 230 aa15.49■□□□□ 0.07
RTCB-202ENST00000463455 IFT57Q9NWB7 429 aa15.49■□□□□ 0.07
RTCB-202ENST00000463455 ZNF316A6NFI3 1004 aaPredicted RBP15.48■□□□□ 0.07
RTCB-202ENST00000463455 GLTPD2A6NH11 291 aa15.48■□□□□ 0.07
RTCB-202ENST00000463455 PRELPP51888 382 aa15.48■□□□□ 0.07
RTCB-202ENST00000463455 CCDC93Q567U6 631 aa15.48■□□□□ 0.07
RTCB-202ENST00000463455 RBM46Q8TBY0 533 aaKnown RBP15.48■□□□□ 0.07
RTCB-202ENST00000463455 CHMP4AQ9BY43 222 aa15.48■□□□□ 0.07
RTCB-202ENST00000463455 CACNA1SQ13698 1873 aa15.48■□□□□ 0.07
RTCB-202ENST00000463455 CCDC88AQ3V6T2 1871 aa15.48■□□□□ 0.07
RTCB-202ENST00000463455 ABCC12Q96J65 1359 aa15.48■□□□□ 0.07
RTCB-202ENST00000463455 APAF1O14727 1248 aa15.47■□□□□ 0.07
RTCB-202ENST00000463455 NTSR2O95665 410 aa15.47■□□□□ 0.07
RTCB-202ENST00000463455 HOXA10P31260 410 aaPredicted RBP15.47■□□□□ 0.07
RTCB-202ENST00000463455 VASPP50552 380 aaPredicted RBP15.47■□□□□ 0.07
RTCB-202ENST00000463455 GNAI1P63096 354 aa15.47■□□□□ 0.07
RTCB-202ENST00000463455 GRIPAP1Q4V328 841 aa15.47■□□□□ 0.07
RTCB-202ENST00000463455 CC2D2BQ6DHV5 1058 aa15.47■□□□□ 0.07
RTCB-202ENST00000463455 C16orf71Q8IYS4 520 aaPredicted RBP15.47■□□□□ 0.07
RTCB-202ENST00000463455 LAS1LQ9Y4W2 734 aaKnown RBP15.47■□□□□ 0.07
RTCB-202ENST00000463455 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
RTCB-202ENST00000463455 FAM177BA6PVY3 158 aa15.46■□□□□ 0.07
RTCB-202ENST00000463455 GPTP24298 496 aa15.46■□□□□ 0.07
RTCB-202ENST00000463455 PROSER3Q2NL68 480 aa15.46■□□□□ 0.07
RTCB-202ENST00000463455 HDGFL1Q5TGJ6 251 aa15.46■□□□□ 0.07
RTCB-202ENST00000463455 SUSD4Q5VX71 490 aa15.46■□□□□ 0.07
RTCB-202ENST00000463455 DPY19L2Q6NUT2 758 aa15.46■□□□□ 0.07
RTCB-202ENST00000463455 COPS6Q7L5N1 327 aa15.46■□□□□ 0.07
RTCB-202ENST00000463455 RTKN2Q8IZC4 609 aa15.46■□□□□ 0.07
RTCB-202ENST00000463455 MBIPQ9NS73 344 aa15.46■□□□□ 0.07
RTCB-202ENST00000463455 DBF4Q9UBU7 674 aaPredicted RBP15.46■□□□□ 0.07
RTCB-202ENST00000463455 FSTL1Q12841 308 aa15.45■□□□□ 0.06
RTCB-202ENST00000463455 CCDC27Q2M243 656 aa15.45■□□□□ 0.06
RTCB-202ENST00000463455 ERFEQ4G0M1 354 aa15.45■□□□□ 0.06
RTCB-202ENST00000463455 SLC10A5Q5PT55 438 aa15.45■□□□□ 0.06
RTCB-202ENST00000463455 NUTM1Q86Y26 1132 aa15.45■□□□□ 0.06
RTCB-202ENST00000463455 XAGE3Q8WTP9 111 aa15.45■□□□□ 0.06
RTCB-202ENST00000463455 UTP14AQ9BVJ6 771 aaKnown RBP15.45■□□□□ 0.06
RTCB-202ENST00000463455 HYPKQ9NX55 129 aa15.45■□□□□ 0.06
RTCB-202ENST00000463455 WDR90Q96KV7 1748 aa15.44■□□□□ 0.06
RTCB-202ENST00000463455 ANP32CO43423 234 aa15.44■□□□□ 0.06
RTCB-202ENST00000463455 FKBP4Q02790 459 aaKnown RBP eCLIP15.44■□□□□ 0.06
RTCB-202ENST00000463455 KRT24Q2M2I5 525 aa15.44■□□□□ 0.06
RTCB-202ENST00000463455 DUSP27Q5VZP5 1158 aa15.44■□□□□ 0.06
RTCB-202ENST00000463455 RPGRQ92834 1020 aaKnown RBP15.44■□□□□ 0.06
RTCB-202ENST00000463455 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
RTCB-202ENST00000463455 CHPF2Q9P2E5 772 aa15.44■□□□□ 0.06
RTCB-202ENST00000463455 SNED1Q8TER0 1413 aa15.43■□□□□ 0.06
RTCB-202ENST00000463455 ANXA1P04083 346 aa15.43■□□□□ 0.06
RTCB-202ENST00000463455 VEGFAP15692 232 aaPredicted RBP15.43■□□□□ 0.06
RTCB-202ENST00000463455 APLP1P51693 650 aa15.43■□□□□ 0.06
RTCB-202ENST00000463455 TCIRG1Q13488 830 aa15.43■□□□□ 0.06
RTCB-202ENST00000463455 PLBD2Q8NHP8 589 aa15.43■□□□□ 0.06
RTCB-202ENST00000463455 NLRP3Q96P20 1036 aa15.43■□□□□ 0.06
RTCB-202ENST00000463455 PSMD1Q99460 953 aa15.43■□□□□ 0.06
RTCB-202ENST00000463455 RRAGCQ9HB90 399 aa15.43■□□□□ 0.06
RTCB-202ENST00000463455 AIMP1Q12904 312 aaKnown RBP15.42■□□□□ 0.06
RTCB-202ENST00000463455 NLRP10Q86W26 655 aa15.42■□□□□ 0.06
RTCB-202ENST00000463455 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
RTCB-202ENST00000463455 RBM17Q96I25 401 aaKnown RBP15.42■□□□□ 0.06
RTCB-202ENST00000463455 ANKRD13DQ6ZTN6 518 aa15.41■□□□□ 0.06
RTCB-202ENST00000463455 SMC1BQ8NDV3 1235 aa15.41■□□□□ 0.06
RTCB-202ENST00000463455 SH3TC1Q8TE82 1336 aa15.41■□□□□ 0.06
RTCB-202ENST00000463455 TRIM28Q13263 835 aaKnown RBP15.4■□□□□ 0.06
RTCB-202ENST00000463455 IL16Q14005 1332 aa15.4■□□□□ 0.06
RTCB-202ENST00000463455 L3MBTL3Q96JM7 780 aaPredicted RBP15.39■□□□□ 0.05
RTCB-202ENST00000463455 MRS2Q9HD23 443 aa15.39■□□□□ 0.05
RTCB-202ENST00000463455 IARSP41252 1262 aaKnown RBP15.38■□□□□ 0.05
RTCB-202ENST00000463455 CCDC184Q52MB2 194 aa15.38■□□□□ 0.05
RTCB-202ENST00000463455 ISCA1Q9BUE6 129 aa15.38■□□□□ 0.05
RTCB-202ENST00000463455 TMX4Q9H1E5 349 aaPredicted RBP15.38■□□□□ 0.05
RTCB-202ENST00000463455 VPS33BQ9H267 617 aa15.38■□□□□ 0.05
RTCB-202ENST00000463455 TRMT112Q9UI30 125 aaKnown RBP15.38■□□□□ 0.05
RTCB-202ENST00000463455 CEP350Q5VT06 3117 aa15.38■□□□□ 0.05
RTCB-202ENST00000463455 IQCA1LA6NCM1 817 aa15.37■□□□□ 0.05
RTCB-202ENST00000463455 PPEF1O14829 653 aaPredicted RBP15.37■□□□□ 0.05
RTCB-202ENST00000463455 BBOX1O75936 387 aa15.37■□□□□ 0.05
RTCB-202ENST00000463455 GOLGA2Q08379 1002 aa15.37■□□□□ 0.05
RTCB-202ENST00000463455 CCDC30Q5VVM6 783 aa15.37■□□□□ 0.05
RTCB-202ENST00000463455 TMC4Q7Z404 712 aa15.37■□□□□ 0.05
RTCB-202ENST00000463455 WWC1Q8IX03 1113 aa15.37■□□□□ 0.05
RTCB-202ENST00000463455 SYNE4Q8N205 404 aa15.37■□□□□ 0.05
RTCB-202ENST00000463455 ZNF277Q9NRM2 450 aaPredicted RBP15.37■□□□□ 0.05
RTCB-202ENST00000463455 SCN4AP35499 1836 aa15.36■□□□□ 0.05
RTCB-202ENST00000463455 POTECB2RU33 542 aa15.36■□□□□ 0.05
RTCB-202ENST00000463455 FZD9O00144 591 aa15.36■□□□□ 0.05
RTCB-202ENST00000463455 HSP90B1P14625 803 aaKnown RBP15.36■□□□□ 0.05
RTCB-202ENST00000463455 JDP2Q8WYK2 163 aa15.36■□□□□ 0.05
RTCB-202ENST00000463455 ATP6V0A2Q9Y487 856 aa15.36■□□□□ 0.05
RTCB-202ENST00000463455 LAMB2P55268 1798 aa15.36■□□□□ 0.05
RTCB-202ENST00000463455 DDX58O95786 925 aaKnown RBP15.35■□□□□ 0.05
RTCB-202ENST00000463455 OLFM4Q6UX06 510 aa15.35■□□□□ 0.05
RTCB-202ENST00000463455 C3orf67Q6ZVT6 689 aa15.35■□□□□ 0.05
RTCB-202ENST00000463455 ABCC4O15439 1325 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms