RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 SMC1BQ8NDV3 1235 aa28.87■■■□□ 2.21
PDLIM7-206ENST00000463411 CFAP44Q96MT7 982 aa28.87■■■□□ 2.21
PDLIM7-206ENST00000463411 CALD1Q05682 793 aaKnown RBP28.86■■■□□ 2.21
PDLIM7-206ENST00000463411 COPS6Q7L5N1 327 aa28.86■■■□□ 2.21
PDLIM7-206ENST00000463411 XAGE3Q8WTP9 111 aa28.86■■■□□ 2.21
PDLIM7-206ENST00000463411 CEP350Q5VT06 3117 aa28.85■■■□□ 2.21
PDLIM7-206ENST00000463411 HDGFL1Q5TGJ6 251 aa28.85■■■□□ 2.21
PDLIM7-206ENST00000463411 APAF1O14727 1248 aa28.84■■■□□ 2.21
PDLIM7-206ENST00000463411 UTP14AQ9BVJ6 771 aaKnown RBP28.84■■■□□ 2.21
PDLIM7-206ENST00000463411 CHPF2Q9P2E5 772 aa28.84■■■□□ 2.21
PDLIM7-206ENST00000463411 RNF123Q5XPI4 1314 aa28.84■■■□□ 2.21
PDLIM7-206ENST00000463411 RBM17Q96I25 401 aaKnown RBP28.83■■■□□ 2.21
PDLIM7-206ENST00000463411 HOXA10P31260 410 aaPredicted RBP28.81■■■□□ 2.2
PDLIM7-206ENST00000463411 CC2D2BQ6DHV5 1058 aa28.81■■■□□ 2.2
PDLIM7-206ENST00000463411 OLFM4Q6UX06 510 aa28.81■■■□□ 2.2
PDLIM7-206ENST00000463411 NLRP3Q96P20 1036 aa28.81■■■□□ 2.2
PDLIM7-206ENST00000463411 ZNF277Q9NRM2 450 aaPredicted RBP28.81■■■□□ 2.2
PDLIM7-206ENST00000463411 MBIPQ9NS73 344 aa28.81■■■□□ 2.2
PDLIM7-206ENST00000463411 IFT57Q9NWB7 429 aa28.8■■■□□ 2.2
PDLIM7-206ENST00000463411 DBF4Q9UBU7 674 aaPredicted RBP28.8■■■□□ 2.2
PDLIM7-206ENST00000463411 GNAI1P63096 354 aa28.79■■■□□ 2.2
PDLIM7-206ENST00000463411 CRAMP1Q96RY5 1269 aa28.79■■■□□ 2.2
PDLIM7-206ENST00000463411 GRIPAP1Q4V328 841 aa28.78■■■□□ 2.2
PDLIM7-206ENST00000463411 DUSP27Q5VZP5 1158 aa28.78■■■□□ 2.2
PDLIM7-206ENST00000463411 PPEF1O14829 653 aaPredicted RBP28.77■■■□□ 2.2
PDLIM7-206ENST00000463411 DDNO94850 711 aaPredicted RBP28.77■■■□□ 2.2
PDLIM7-206ENST00000463411 IARSP41252 1262 aaKnown RBP28.77■■■□□ 2.2
PDLIM7-206ENST00000463411 TCIRG1Q13488 830 aa28.77■■■□□ 2.2
PDLIM7-206ENST00000463411 NLRP10Q86W26 655 aa28.77■■■□□ 2.2
PDLIM7-206ENST00000463411 SYNE4Q8N205 404 aa28.77■■■□□ 2.2
PDLIM7-206ENST00000463411 PSMD1Q99460 953 aa28.77■■■□□ 2.2
PDLIM7-206ENST00000463411 TMX4Q9H1E5 349 aaPredicted RBP28.77■■■□□ 2.2
PDLIM7-206ENST00000463411 LAMB2P55268 1798 aa28.77■■■□□ 2.2
PDLIM7-206ENST00000463411 ZNF853P0CG23 659 aa28.76■■■□□ 2.19
PDLIM7-206ENST00000463411 SLC10A5Q5PT55 438 aa28.76■■■□□ 2.19
PDLIM7-206ENST00000463411 PLBD2Q8NHP8 589 aa28.76■■■□□ 2.19
PDLIM7-206ENST00000463411 HYPKQ9NX55 129 aa28.76■■■□□ 2.19
PDLIM7-206ENST00000463411 SNED1Q8TER0 1413 aa28.76■■■□□ 2.19
PDLIM7-206ENST00000463411 POTECB2RU33 542 aa28.75■■■□□ 2.19
PDLIM7-206ENST00000463411 TRMT112Q9UI30 125 aaKnown RBP28.75■■■□□ 2.19
PDLIM7-206ENST00000463411 SCN4AP35499 1836 aa28.75■■■□□ 2.19
PDLIM7-206ENST00000463411 IQCA1LA6NCM1 817 aa28.74■■■□□ 2.19
PDLIM7-206ENST00000463411 C3orf67Q6ZVT6 689 aa28.74■■■□□ 2.19
PDLIM7-206ENST00000463411 SH3TC1Q8TE82 1336 aa28.73■■■□□ 2.19
PDLIM7-206ENST00000463411 ANKRD13DQ6ZTN6 518 aa28.73■■■□□ 2.19
PDLIM7-206ENST00000463411 JDP2Q8WYK2 163 aa28.72■■■□□ 2.19
PDLIM7-206ENST00000463411 ZNF541Q9H0D2 1346 aa28.7■■■□□ 2.19
PDLIM7-206ENST00000463411 TCERG1O14776 1098 aaKnown RBP28.7■■■□□ 2.18
PDLIM7-206ENST00000463411 L3MBTL3Q96JM7 780 aaPredicted RBP28.7■■■□□ 2.18
PDLIM7-206ENST00000463411 HCLS1P14317 486 aaPredicted RBP28.69■■■□□ 2.18
PDLIM7-206ENST00000463411 CHMP4AQ9BY43 222 aa28.69■■■□□ 2.18
PDLIM7-206ENST00000463411 DDX60Q8IY21 1712 aaKnown RBP28.69■■■□□ 2.18
PDLIM7-206ENST00000463411 ABCC4O15439 1325 aa28.69■■■□□ 2.18
PDLIM7-206ENST00000463411 ANP32CO43423 234 aa28.68■■■□□ 2.18
PDLIM7-206ENST00000463411 GOLGA2Q08379 1002 aa28.68■■■□□ 2.18
PDLIM7-206ENST00000463411 CCDC184Q52MB2 194 aa28.68■■■□□ 2.18
PDLIM7-206ENST00000463411 DNAJC5GQ8N7S2 189 aa28.68■■■□□ 2.18
PDLIM7-206ENST00000463411 FZD9O00144 591 aa28.67■■■□□ 2.18
PDLIM7-206ENST00000463411 ELL2O00472 640 aaPredicted RBP28.67■■■□□ 2.18
PDLIM7-206ENST00000463411 HTRA3P83110 453 aa28.67■■■□□ 2.18
PDLIM7-206ENST00000463411 DDX46Q7L014 1031 aaKnown RBP28.67■■■□□ 2.18
PDLIM7-206ENST00000463411 ATP6V0A2Q9Y487 856 aa28.67■■■□□ 2.18
PDLIM7-206ENST00000463411 EIF6P56537 245 aaKnown RBP28.66■■■□□ 2.18
PDLIM7-206ENST00000463411 CHADLQ6NUI6 762 aa28.66■■■□□ 2.18
PDLIM7-206ENST00000463411 LARGE2Q8N3Y3 721 aa28.66■■■□□ 2.18
PDLIM7-206ENST00000463411 RIC3Q7Z5B4 369 aa28.65■■■□□ 2.18
PDLIM7-206ENST00000463411 ISCA1Q9BUE6 129 aa28.65■■■□□ 2.18
PDLIM7-206ENST00000463411 MRS2Q9HD23 443 aa28.65■■■□□ 2.18
PDLIM7-206ENST00000463411 ATP5J2-PTCD1G3V325 749 aa28.64■■■□□ 2.18
PDLIM7-206ENST00000463411 BBOX1O75936 387 aa28.64■■■□□ 2.18
PDLIM7-206ENST00000463411 GPC2Q8N158 579 aa28.64■■■□□ 2.18
PDLIM7-206ENST00000463411 KLRG1Q96E93 195 aa28.64■■■□□ 2.18
PDLIM7-206ENST00000463411 HACL1Q9UJ83 578 aa28.64■■■□□ 2.18
PDLIM7-206ENST00000463411 CCDC27Q2M243 656 aa28.63■■■□□ 2.17
PDLIM7-206ENST00000463411 SUPT20HQ8NEM7 779 aa28.63■■■□□ 2.17
PDLIM7-206ENST00000463411 TAF1DQ9H5J8 278 aaPredicted RBP28.63■■■□□ 2.17
PDLIM7-206ENST00000463411 COL4A5P29400 1685 aa28.62■■■□□ 2.17
PDLIM7-206ENST00000463411 GRAPQ13588 217 aa28.62■■■□□ 2.17
PDLIM7-206ENST00000463411 CCDC30Q5VVM6 783 aa28.62■■■□□ 2.17
PDLIM7-206ENST00000463411 LDHDQ86WU2 507 aa28.62■■■□□ 2.17
PDLIM7-206ENST00000463411 NIM1KQ8IY84 436 aa28.62■■■□□ 2.17
PDLIM7-206ENST00000463411 C8orf58Q8NAV2 365 aa28.62■■■□□ 2.17
PDLIM7-206ENST00000463411 GRAPLQ8TC17 118 aaPredicted RBP28.62■■■□□ 2.17
PDLIM7-206ENST00000463411 ZNF428Q96B54 188 aa28.62■■■□□ 2.17
PDLIM7-206ENST00000463411 PPIP5K2O43314 1243 aa28.61■■■□□ 2.17
PDLIM7-206ENST00000463411 DIEXFQ68CQ4 756 aaKnown RBP28.61■■■□□ 2.17
PDLIM7-206ENST00000463411 SLC51AQ86UW1 340 aa28.61■■■□□ 2.17
PDLIM7-206ENST00000463411 FAM89AQ96GI7 184 aa28.61■■■□□ 2.17
PDLIM7-206ENST00000463411 VPS33BQ9H267 617 aa28.61■■■□□ 2.17
PDLIM7-206ENST00000463411 PHAXQ9H814 394 aaKnown RBP28.61■■■□□ 2.17
PDLIM7-206ENST00000463411 POTEIP0CG38 1075 aa28.6■■■□□ 2.17
PDLIM7-206ENST00000463411 POTEJP0CG39 1038 aa28.6■■■□□ 2.17
PDLIM7-206ENST00000463411 TRIM28Q13263 835 aaKnown RBP28.6■■■□□ 2.17
PDLIM7-206ENST00000463411 EAPPQ56P03 285 aaPredicted RBP28.6■■■□□ 2.17
PDLIM7-206ENST00000463411 TMC4Q7Z404 712 aa28.6■■■□□ 2.17
PDLIM7-206ENST00000463411 SP8Q8IXZ3 490 aa28.6■■■□□ 2.17
PDLIM7-206ENST00000463411 DDX58O95786 925 aaKnown RBP28.59■■■□□ 2.17
PDLIM7-206ENST00000463411 EPHX2P34913 555 aa28.59■■■□□ 2.17
PDLIM7-206ENST00000463411 DPP8Q6V1X1 898 aaPredicted RBP28.59■■■□□ 2.17
PDLIM7-206ENST00000463411 GJA3Q9Y6H8 435 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms