RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 GTF2E1P29083 439 aaPredicted RBP17.56■□□□□ 0.4
SEMA3D-203ENST00000463315 HNRNPUQ00839 825 aaKnown RBP eCLIP17.56■□□□□ 0.4
SEMA3D-203ENST00000463315 SUSD4Q5VX71 490 aa17.56■□□□□ 0.4
SEMA3D-203ENST00000463315 KSR2Q6VAB6 950 aa17.56■□□□□ 0.4
SEMA3D-203ENST00000463315 NLRP10Q86W26 655 aa17.56■□□□□ 0.4
SEMA3D-203ENST00000463315 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
SEMA3D-203ENST00000463315 NTSR2O95665 410 aa17.55■□□□□ 0.4
SEMA3D-203ENST00000463315 GPTP24298 496 aa17.55■□□□□ 0.4
SEMA3D-203ENST00000463315 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
SEMA3D-203ENST00000463315 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
SEMA3D-203ENST00000463315 METTL22Q9BUU2 404 aaPredicted RBP17.55■□□□□ 0.4
SEMA3D-203ENST00000463315 ANKRD36CQ5JPF3 1778 aa17.55■□□□□ 0.4
SEMA3D-203ENST00000463315 SRGNP10124 158 aa17.54■□□□□ 0.4
SEMA3D-203ENST00000463315 YBX3P16989 372 aaKnown RBP eCLIP17.54■□□□□ 0.4
SEMA3D-203ENST00000463315 FLIIQ13045 1269 aa17.54■□□□□ 0.4
SEMA3D-203ENST00000463315 STYK1Q6J9G0 422 aa17.54■□□□□ 0.4
SEMA3D-203ENST00000463315 C2CD5Q86YS7 1000 aa17.54■□□□□ 0.4
SEMA3D-203ENST00000463315 UTRNP46939 3433 aa17.54■□□□□ 0.4
SEMA3D-203ENST00000463315 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 ZBED9Q6R2W3 1325 aa17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 BRCA1P38398 1863 aaKnown RBP17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 ANKRD31Q8N7Z5 1873 aa17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 PI4KAP2A4QPH2 592 aa17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 CHRNA5P30532 468 aa17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 ALDH1L2Q3SY69 923 aa17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 DALRD3Q5D0E6 543 aaKnown RBP17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 TTLL6Q8N841 843 aa17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 PI4KAP1Q8N8J0 262 aa17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 CCDC191Q8NCU4 936 aa17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 DLEC1Q9Y238 1755 aa17.53■□□□□ 0.4
SEMA3D-203ENST00000463315 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
SEMA3D-203ENST00000463315 NPR1P16066 1061 aa17.52■□□□□ 0.4
SEMA3D-203ENST00000463315 NEXNQ0ZGT2 675 aa17.52■□□□□ 0.4
SEMA3D-203ENST00000463315 CRY2Q49AN0 593 aa17.52■□□□□ 0.4
SEMA3D-203ENST00000463315 CNKSR1Q969H4 720 aa17.52■□□□□ 0.4
SEMA3D-203ENST00000463315 MASTLQ96GX5 879 aa17.52■□□□□ 0.4
SEMA3D-203ENST00000463315 ARFGEF2Q9Y6D5 1785 aa17.52■□□□□ 0.4
SEMA3D-203ENST00000463315 ADCY9O60503 1353 aa17.52■□□□□ 0.39
SEMA3D-203ENST00000463315 SH3TC1Q8TE82 1336 aa17.51■□□□□ 0.39
SEMA3D-203ENST00000463315 FAM177BA6PVY3 158 aa17.51■□□□□ 0.39
SEMA3D-203ENST00000463315 TCERG1O14776 1098 aaKnown RBP17.51■□□□□ 0.39
SEMA3D-203ENST00000463315 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
SEMA3D-203ENST00000463315 G2E3Q7L622 706 aa17.51■□□□□ 0.39
SEMA3D-203ENST00000463315 PELP1Q8IZL8 1130 aaKnown RBP17.51■□□□□ 0.39
SEMA3D-203ENST00000463315 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
SEMA3D-203ENST00000463315 BCS1LQ9Y276 419 aa17.51■□□□□ 0.39
SEMA3D-203ENST00000463315 MAP3K2Q9Y2U5 619 aa17.51■□□□□ 0.39
SEMA3D-203ENST00000463315 BRPF1P55201 1214 aaPredicted RBP17.5■□□□□ 0.39
SEMA3D-203ENST00000463315 MKRN4PQ13434 485 aaPredicted RBP17.5■□□□□ 0.39
SEMA3D-203ENST00000463315 FKBP5Q13451 457 aaPredicted RBP17.5■□□□□ 0.39
SEMA3D-203ENST00000463315 NUTM1Q86Y26 1132 aa17.5■□□□□ 0.39
SEMA3D-203ENST00000463315 NLRP3Q96P20 1036 aa17.5■□□□□ 0.39
SEMA3D-203ENST00000463315 ALDH1B1P30837 517 aa17.49■□□□□ 0.39
SEMA3D-203ENST00000463315 HOXA10P31260 410 aaPredicted RBP17.49■□□□□ 0.39
SEMA3D-203ENST00000463315 CCDC24Q8N4L8 307 aa17.49■□□□□ 0.39
SEMA3D-203ENST00000463315 ZBTB38Q8NAP3 1195 aaPredicted RBP17.49■□□□□ 0.39
SEMA3D-203ENST00000463315 ABCC12Q96J65 1359 aa17.49■□□□□ 0.39
SEMA3D-203ENST00000463315 PTPRCP08575 1304 aa17.48■□□□□ 0.39
SEMA3D-203ENST00000463315 ATP5J2-PTCD1G3V325 749 aa17.48■□□□□ 0.39
SEMA3D-203ENST00000463315 DNAAF4Q8WXU2 420 aa17.48■□□□□ 0.39
SEMA3D-203ENST00000463315 MYD88Q99836 296 aa17.48■□□□□ 0.39
SEMA3D-203ENST00000463315 CWC25Q9NXE8 425 aaPredicted RBP17.48■□□□□ 0.39
SEMA3D-203ENST00000463315 ARFGEF1Q9Y6D6 1849 aa17.48■□□□□ 0.39
SEMA3D-203ENST00000463315 PCCAP05165 728 aaPredicted RBP17.47■□□□□ 0.39
SEMA3D-203ENST00000463315 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
SEMA3D-203ENST00000463315 MRPL50Q8N5N7 158 aaKnown RBP17.47■□□□□ 0.39
SEMA3D-203ENST00000463315 LINS1Q8NG48 757 aa17.47■□□□□ 0.39
SEMA3D-203ENST00000463315 ZNF622Q969S3 477 aaKnown RBP eCLIP17.47■□□□□ 0.39
SEMA3D-203ENST00000463315 IGKV5-2P06315 115 aa17.46■□□□□ 0.39
SEMA3D-203ENST00000463315 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
SEMA3D-203ENST00000463315 CRAMP1Q96RY5 1269 aa17.46■□□□□ 0.39
SEMA3D-203ENST00000463315 COL11A2P13942 1736 aaPredicted RBP17.45■□□□□ 0.38
SEMA3D-203ENST00000463315 NEURL1BA8MQ27 555 aa17.45■□□□□ 0.38
SEMA3D-203ENST00000463315 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
SEMA3D-203ENST00000463315 FAM89AQ96GI7 184 aa17.45■□□□□ 0.38
SEMA3D-203ENST00000463315 CDHR2Q9BYE9 1310 aa17.45■□□□□ 0.38
SEMA3D-203ENST00000463315 SF3B3Q15393 1217 aaKnown RBP17.44■□□□□ 0.38
SEMA3D-203ENST00000463315 GRIPAP1Q4V328 841 aa17.44■□□□□ 0.38
SEMA3D-203ENST00000463315 PRPF40BQ6NWY9 871 aaKnown RBP17.44■□□□□ 0.38
SEMA3D-203ENST00000463315 RBM17Q96I25 401 aaKnown RBP17.44■□□□□ 0.38
SEMA3D-203ENST00000463315 IRS4O14654 1257 aaPredicted RBP17.43■□□□□ 0.38
SEMA3D-203ENST00000463315 CC2D2BQ6DHV5 1058 aa17.43■□□□□ 0.38
SEMA3D-203ENST00000463315 C7orf43Q8WVR3 580 aa17.43■□□□□ 0.38
SEMA3D-203ENST00000463315 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
SEMA3D-203ENST00000463315 CHD4Q14839 1912 aa17.43■□□□□ 0.38
SEMA3D-203ENST00000463315 TNRC6CQ9HCJ0 1690 aaKnown RBP17.42■□□□□ 0.38
SEMA3D-203ENST00000463315 H7C1W4 665 aa17.42■□□□□ 0.38
SEMA3D-203ENST00000463315 ALDH1L1O75891 902 aa17.42■□□□□ 0.38
SEMA3D-203ENST00000463315 HCLS1P14317 486 aaPredicted RBP17.42■□□□□ 0.38
SEMA3D-203ENST00000463315 RARSP54136 660 aaKnown RBP17.42■□□□□ 0.38
SEMA3D-203ENST00000463315 GCKRQ14397 625 aa17.42■□□□□ 0.38
SEMA3D-203ENST00000463315 BEND3Q5T5X7 828 aa17.42■□□□□ 0.38
SEMA3D-203ENST00000463315 ARHGAP27Q6ZUM4 889 aa17.42■□□□□ 0.38
SEMA3D-203ENST00000463315 SYNE4Q8N205 404 aa17.42■□□□□ 0.38
SEMA3D-203ENST00000463315 WWC3Q9ULE0 1092 aa17.42■□□□□ 0.38
SEMA3D-203ENST00000463315 PDE8AO60658 829 aa17.41■□□□□ 0.38
SEMA3D-203ENST00000463315 CWF19L2Q2TBE0 894 aaKnown RBP17.41■□□□□ 0.38
SEMA3D-203ENST00000463315 ARHGAP45Q92619 1136 aa17.41■□□□□ 0.38
SEMA3D-203ENST00000463315 LTBP3Q9NS15 1303 aa17.41■□□□□ 0.38
SEMA3D-203ENST00000463315 BBOX1O75936 387 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms