RNA–Protein interactions for RNA: ENST00000463285.5

CTPS1-203, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 739 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-203ENST00000463285 RASSF10A6NK89 507 aa11.78□□□□□ -0.52
CTPS1-203ENST00000463285 HSPA8P11142 646 aaKnown RBP11.78□□□□□ -0.52
CTPS1-203ENST00000463285 IARSP41252 1262 aaKnown RBP11.78□□□□□ -0.52
CTPS1-203ENST00000463285 CLEC4GQ6UXB4 293 aa11.78□□□□□ -0.52
CTPS1-203ENST00000463285 TPTE2Q6XPS3 522 aa11.78□□□□□ -0.52
CTPS1-203ENST00000463285 PNMA8AQ86V59 439 aaPredicted RBP11.78□□□□□ -0.52
CTPS1-203ENST00000463285 RTKN2Q8IZC4 609 aa11.78□□□□□ -0.52
CTPS1-203ENST00000463285 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
CTPS1-203ENST00000463285 CEMIPQ8WUJ3 1361 aa11.78□□□□□ -0.52
CTPS1-203ENST00000463285 ADAMTSL1Q8N6G6 1762 aa11.77□□□□□ -0.52
CTPS1-203ENST00000463285 GTF2E1P29083 439 aaPredicted RBP11.77□□□□□ -0.53
CTPS1-203ENST00000463285 PRKAR2BP31323 418 aa11.77□□□□□ -0.53
CTPS1-203ENST00000463285 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
CTPS1-203ENST00000463285 ABHD8Q96I13 439 aa11.77□□□□□ -0.53
CTPS1-203ENST00000463285 GTF3C3Q9Y5Q9 886 aa11.77□□□□□ -0.53
CTPS1-203ENST00000463285 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.53
CTPS1-203ENST00000463285 WDR33Q9C0J8 1336 aaKnown RBP11.77□□□□□ -0.53
CTPS1-203ENST00000463285 KLRG2A4D1S0 409 aaPredicted RBP11.76□□□□□ -0.53
CTPS1-203ENST00000463285 FZD9O00144 591 aa11.76□□□□□ -0.53
CTPS1-203ENST00000463285 PER1O15534 1290 aaPredicted RBP11.76□□□□□ -0.53
CTPS1-203ENST00000463285 SNRPA1P09661 255 aaKnown RBP11.76□□□□□ -0.53
CTPS1-203ENST00000463285 ALDH1B1P30837 517 aa11.76□□□□□ -0.53
CTPS1-203ENST00000463285 MAP2K1Q02750 393 aaPredicted RBP11.76□□□□□ -0.53
CTPS1-203ENST00000463285 GRM1Q13255 1194 aa11.76□□□□□ -0.53
CTPS1-203ENST00000463285 GPC2Q8N158 579 aa11.76□□□□□ -0.53
CTPS1-203ENST00000463285 JDP2Q8WYK2 163 aa11.76□□□□□ -0.53
CTPS1-203ENST00000463285 PHACTR3Q96KR7 559 aa11.76□□□□□ -0.53
CTPS1-203ENST00000463285 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
CTPS1-203ENST00000463285 LMOD1P29536 600 aaPredicted RBP11.75□□□□□ -0.53
CTPS1-203ENST00000463285 EIF6P56537 245 aaKnown RBP11.75□□□□□ -0.53
CTPS1-203ENST00000463285 FAM161AQ3B820 660 aa11.75□□□□□ -0.53
CTPS1-203ENST00000463285 NBPF10Q6P3W6 841 aaKnown RBP11.75□□□□□ -0.53
CTPS1-203ENST00000463285 NBPF15Q8N660 670 aa11.75□□□□□ -0.53
CTPS1-203ENST00000463285 HLFQ16534 295 aa11.74□□□□□ -0.53
CTPS1-203ENST00000463285 MCM10Q7L590 875 aa11.74□□□□□ -0.53
CTPS1-203ENST00000463285 RTF1Q92541 710 aaKnown RBP11.74□□□□□ -0.53
CTPS1-203ENST00000463285 DDX21Q9NR30 783 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTPS1-203ENST00000463285 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
CTPS1-203ENST00000463285 CCDC85CA6NKD9 419 aa11.73□□□□□ -0.53
CTPS1-203ENST00000463285 FMR1Q06787 632 aaKnown RBP eCLIP11.73□□□□□ -0.53
CTPS1-203ENST00000463285 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
CTPS1-203ENST00000463285 NGEFQ8N5V2 710 aa11.73□□□□□ -0.53
CTPS1-203ENST00000463285 PSMD1Q99460 953 aa11.73□□□□□ -0.53
CTPS1-203ENST00000463285 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
CTPS1-203ENST00000463285 RSPH6AQ9H0K4 717 aa11.73□□□□□ -0.53
CTPS1-203ENST00000463285 ABCC12Q96J65 1359 aa11.72□□□□□ -0.53
CTPS1-203ENST00000463285 RGL2O15211 777 aa11.72□□□□□ -0.53
CTPS1-203ENST00000463285 ECE1P42892 770 aa11.72□□□□□ -0.53
CTPS1-203ENST00000463285 DCTN1Q14203 1278 aa11.72□□□□□ -0.53
CTPS1-203ENST00000463285 CYP4F22Q6NT55 531 aa11.72□□□□□ -0.53
CTPS1-203ENST00000463285 LARGE2Q8N3Y3 721 aa11.72□□□□□ -0.53
CTPS1-203ENST00000463285 CAPNS2Q96L46 248 aa11.72□□□□□ -0.53
CTPS1-203ENST00000463285 CFAP53Q96M91 514 aa11.72□□□□□ -0.53
CTPS1-203ENST00000463285 LTBP1Q14766 1721 aa11.72□□□□□ -0.53
CTPS1-203ENST00000463285 COL4A5P29400 1685 aa11.71□□□□□ -0.53
CTPS1-203ENST00000463285 TCERG1O14776 1098 aaKnown RBP11.71□□□□□ -0.53
CTPS1-203ENST00000463285 SLC34A2O95436 690 aa11.71□□□□□ -0.53
CTPS1-203ENST00000463285 EPS15P42566 896 aa11.71□□□□□ -0.53
CTPS1-203ENST00000463285 CC2D2BQ6DHV5 1058 aa11.71□□□□□ -0.53
CTPS1-203ENST00000463285 RPGRQ92834 1020 aaKnown RBP11.71□□□□□ -0.53
CTPS1-203ENST00000463285 GPR101Q96P66 508 aaPredicted RBP11.71□□□□□ -0.53
CTPS1-203ENST00000463285 NYXQ9GZU5 481 aa11.71□□□□□ -0.53
CTPS1-203ENST00000463285 SNED1Q8TER0 1413 aa11.7□□□□□ -0.54
CTPS1-203ENST00000463285 NPC1L1Q9UHC9 1359 aa11.7□□□□□ -0.54
CTPS1-203ENST00000463285 TRAF5O00463 557 aa11.7□□□□□ -0.54
CTPS1-203ENST00000463285 GABBR2O75899 941 aa11.7□□□□□ -0.54
CTPS1-203ENST00000463285 U2AF1L5P0DN76 240 aaPredicted RBP11.7□□□□□ -0.54
CTPS1-203ENST00000463285 SCNN1DP51172 638 aa11.7□□□□□ -0.54
CTPS1-203ENST00000463285 U2AF1Q01081 240 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTPS1-203ENST00000463285 CRY2Q49AN0 593 aa11.7□□□□□ -0.54
CTPS1-203ENST00000463285 MIS18AQ9NYP9 233 aa11.7□□□□□ -0.54
CTPS1-203ENST00000463285 TSKSQ9UJT2 592 aa11.7□□□□□ -0.54
CTPS1-203ENST00000463285 NUDCQ9Y266 331 aa11.7□□□□□ -0.54
CTPS1-203ENST00000463285 THSD7BQ9C0I4 1608 aa11.69□□□□□ -0.54
CTPS1-203ENST00000463285 AOC2O75106 756 aa11.69□□□□□ -0.54
CTPS1-203ENST00000463285 GPTP24298 496 aa11.69□□□□□ -0.54
CTPS1-203ENST00000463285 MLLT1Q03111 559 aaPredicted RBP11.69□□□□□ -0.54
CTPS1-203ENST00000463285 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
CTPS1-203ENST00000463285 USP50Q70EL3 339 aaPredicted RBP11.69□□□□□ -0.54
CTPS1-203ENST00000463285 SLC51AQ86UW1 340 aa11.69□□□□□ -0.54
CTPS1-203ENST00000463285 NIM1KQ8IY84 436 aa11.69□□□□□ -0.54
CTPS1-203ENST00000463285 CFAP44Q96MT7 982 aa11.69□□□□□ -0.54
CTPS1-203ENST00000463285 PPEF1O14829 653 aaPredicted RBP11.68□□□□□ -0.54
CTPS1-203ENST00000463285 CST9Q5W186 159 aa11.68□□□□□ -0.54
CTPS1-203ENST00000463285 RBM17Q96I25 401 aaKnown RBP11.68□□□□□ -0.54
CTPS1-203ENST00000463285 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
CTPS1-203ENST00000463285 TLL2Q9Y6L7 1015 aa11.68□□□□□ -0.54
CTPS1-203ENST00000463285 LAMB4A4D0S4 1761 aa11.67□□□□□ -0.54
CTPS1-203ENST00000463285 MAP3K15Q6ZN16 1313 aa11.67□□□□□ -0.54
CTPS1-203ENST00000463285 PPIP5K2O43314 1243 aa11.67□□□□□ -0.54
CTPS1-203ENST00000463285 MYL6BP14649 208 aa11.67□□□□□ -0.54
CTPS1-203ENST00000463285 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
CTPS1-203ENST00000463285 TAF7Q15545 349 aaPredicted RBP11.67□□□□□ -0.54
CTPS1-203ENST00000463285 GRIPAP1Q4V328 841 aa11.67□□□□□ -0.54
CTPS1-203ENST00000463285 TTLL7Q6ZT98 887 aa11.67□□□□□ -0.54
CTPS1-203ENST00000463285 TMX4Q9H1E5 349 aaPredicted RBP11.67□□□□□ -0.54
CTPS1-203ENST00000463285 ZBTB3Q9H5J0 574 aa11.67□□□□□ -0.54
CTPS1-203ENST00000463285 UBN2Q6ZU65 1347 aa11.66□□□□□ -0.54
CTPS1-203ENST00000463285 TRPM7Q96QT4 1865 aa11.66□□□□□ -0.54
CTPS1-203ENST00000463285 ERVV-1B6SEH8 477 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms