RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
R3HDM1-213ENST00000463230 NLRP10Q86W26 655 aa16.78■□□□□ 0.28
R3HDM1-213ENST00000463230 ISCA1Q9BUE6 129 aa16.78■□□□□ 0.28
R3HDM1-213ENST00000463230 EXOSC9Q06265 439 aaKnown RBP16.78■□□□□ 0.28
R3HDM1-213ENST00000463230 SLC10A5Q5PT55 438 aa16.78■□□□□ 0.28
R3HDM1-213ENST00000463230 ABCC12Q96J65 1359 aa16.78■□□□□ 0.28
R3HDM1-213ENST00000463230 CRY2Q49AN0 593 aa16.77■□□□□ 0.28
R3HDM1-213ENST00000463230 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.28
R3HDM1-213ENST00000463230 SPINK5Q9NQ38 1064 aaPredicted RBP16.77■□□□□ 0.28
R3HDM1-213ENST00000463230 TNRC6CQ9HCJ0 1690 aaKnown RBP16.77■□□□□ 0.28
R3HDM1-213ENST00000463230 ERFEQ4G0M1 354 aa16.77■□□□□ 0.27
R3HDM1-213ENST00000463230 SOGA3Q5TF21 947 aa16.77■□□□□ 0.27
R3HDM1-213ENST00000463230 ZNF622Q969S3 477 aaKnown RBP eCLIP16.77■□□□□ 0.272e-6■■□□□ 12.9
R3HDM1-213ENST00000463230 FAM177BA6PVY3 158 aa16.76■□□□□ 0.27
R3HDM1-213ENST00000463230 CCDC24Q8N4L8 307 aa16.76■□□□□ 0.27
R3HDM1-213ENST00000463230 PHAXQ9H814 394 aaKnown RBP16.76■□□□□ 0.27
R3HDM1-213ENST00000463230 WWC3Q9ULE0 1092 aa16.76■□□□□ 0.27
R3HDM1-213ENST00000463230 SH3TC1Q8TE82 1336 aa16.75■□□□□ 0.27
R3HDM1-213ENST00000463230 ALDH1B1P30837 517 aa16.75■□□□□ 0.27
R3HDM1-213ENST00000463230 KSR2Q6VAB6 950 aa16.75■□□□□ 0.27
R3HDM1-213ENST00000463230 ARHGAP27Q6ZUM4 889 aa16.75■□□□□ 0.27
R3HDM1-213ENST00000463230 ADCY9O60503 1353 aa16.75■□□□□ 0.27
R3HDM1-213ENST00000463230 LAMB2P55268 1798 aa16.74■□□□□ 0.27
R3HDM1-213ENST00000463230 HSP90B1P14625 803 aaKnown RBP16.74■□□□□ 0.27
R3HDM1-213ENST00000463230 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
R3HDM1-213ENST00000463230 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
R3HDM1-213ENST00000463230 NUTM1Q86Y26 1132 aa16.74■□□□□ 0.27
R3HDM1-213ENST00000463230 ZNF428Q96B54 188 aa16.74■□□□□ 0.27
R3HDM1-213ENST00000463230 METTL22Q9BUU2 404 aaPredicted RBP16.74■□□□□ 0.27
R3HDM1-213ENST00000463230 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
R3HDM1-213ENST00000463230 CCDC191Q8NCU4 936 aa16.73■□□□□ 0.27
R3HDM1-213ENST00000463230 NLRP3Q96P20 1036 aa16.73■□□□□ 0.27
R3HDM1-213ENST00000463230 TRMT112Q9UI30 125 aaKnown RBP16.73■□□□□ 0.27
R3HDM1-213ENST00000463230 SLX4Q8IY92 1834 aa16.73■□□□□ 0.27
R3HDM1-213ENST00000463230 PRPF40BQ6NWY9 871 aaKnown RBP16.73■□□□□ 0.27
R3HDM1-213ENST00000463230 LTBP3Q9NS15 1303 aa16.72■□□□□ 0.27
R3HDM1-213ENST00000463230 TRMT2AQ8IZ69 625 aaKnown RBP16.72■□□□□ 0.27
R3HDM1-213ENST00000463230 RPGRQ92834 1020 aaKnown RBP16.72■□□□□ 0.27
R3HDM1-213ENST00000463230 CRAMP1Q96RY5 1269 aa16.72■□□□□ 0.27
R3HDM1-213ENST00000463230 CACNA1SQ13698 1873 aa16.72■□□□□ 0.27
R3HDM1-213ENST00000463230 FER1L6Q2WGJ9 1857 aa16.72■□□□□ 0.27
R3HDM1-213ENST00000463230 CT47B1P0C2W7 299 aaPredicted RBP16.72■□□□□ 0.27
R3HDM1-213ENST00000463230 FLIIQ13045 1269 aa16.72■□□□□ 0.27
R3HDM1-213ENST00000463230 RBM17Q96I25 401 aaKnown RBP16.72■□□□□ 0.27
R3HDM1-213ENST00000463230 NEXNQ0ZGT2 675 aa16.71■□□□□ 0.27
R3HDM1-213ENST00000463230 GRIPAP1Q4V328 841 aa16.71■□□□□ 0.27
R3HDM1-213ENST00000463230 MAP3K2Q9Y2U5 619 aa16.71■□□□□ 0.27
R3HDM1-213ENST00000463230 DDX60Q8IY21 1712 aaKnown RBP16.71■□□□□ 0.27
R3HDM1-213ENST00000463230 SBF1O95248 1867 aa16.71■□□□□ 0.27
R3HDM1-213ENST00000463230 ZC3H4Q9UPT8 1303 aaKnown RBP16.71■□□□□ 0.27
R3HDM1-213ENST00000463230 CC2D2BQ6DHV5 1058 aa16.7■□□□□ 0.26
R3HDM1-213ENST00000463230 MYD88Q99836 296 aa16.7■□□□□ 0.26
R3HDM1-213ENST00000463230 PI4KAP2A4QPH2 592 aa16.7■□□□□ 0.26
R3HDM1-213ENST00000463230 PI4KAP1Q8N8J0 262 aa16.7■□□□□ 0.26
R3HDM1-213ENST00000463230 ZBTB38Q8NAP3 1195 aaPredicted RBP16.7■□□□□ 0.26
R3HDM1-213ENST00000463230 C7orf43Q8WVR3 580 aa16.7■□□□□ 0.26
R3HDM1-213ENST00000463230 CWC25Q9NXE8 425 aaPredicted RBP16.7■□□□□ 0.26
R3HDM1-213ENST00000463230 ATP5J2-PTCD1G3V325 749 aa16.69■□□□□ 0.26
R3HDM1-213ENST00000463230 PCCAP05165 728 aaPredicted RBP16.69■□□□□ 0.26
R3HDM1-213ENST00000463230 CCDC93Q567U6 631 aa16.69■□□□□ 0.26
R3HDM1-213ENST00000463230 G2E3Q7L622 706 aa16.69■□□□□ 0.26
R3HDM1-213ENST00000463230 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
R3HDM1-213ENST00000463230 C21orf2O43822 256 aa16.68■□□□□ 0.26
R3HDM1-213ENST00000463230 ZNF784Q8NCA9 323 aaPredicted RBP16.68■□□□□ 0.26
R3HDM1-213ENST00000463230 LMNB1P20700 586 aa16.68■□□□□ 0.26
R3HDM1-213ENST00000463230 FKBP5Q13451 457 aaPredicted RBP16.68■□□□□ 0.26
R3HDM1-213ENST00000463230 SF3B3Q15393 1217 aaKnown RBP16.67■□□□□ 0.26
R3HDM1-213ENST00000463230 RTKN2Q8IZC4 609 aa16.67■□□□□ 0.26
R3HDM1-213ENST00000463230 DNAAF4Q8WXU2 420 aa16.67■□□□□ 0.26
R3HDM1-213ENST00000463230 CDHR2Q9BYE9 1310 aa16.67■□□□□ 0.26
R3HDM1-213ENST00000463230 DICER1Q9UPY3 1922 aaKnown RBP16.67■□□□□ 0.26
R3HDM1-213ENST00000463230 NFKBIEO00221 500 aa16.66■□□□□ 0.26
R3HDM1-213ENST00000463230 ALDH1L2Q3SY69 923 aa16.66■□□□□ 0.26
R3HDM1-213ENST00000463230 C9orf131Q5VYM1 1079 aa16.66■□□□□ 0.26
R3HDM1-213ENST00000463230 TMC4Q7Z404 712 aa16.66■□□□□ 0.26
R3HDM1-213ENST00000463230 HCLS1P14317 486 aaPredicted RBP16.66■□□□□ 0.26
R3HDM1-213ENST00000463230 TAOK3Q9H2K8 898 aa16.66■□□□□ 0.26
R3HDM1-213ENST00000463230 IRS4O14654 1257 aaPredicted RBP16.65■□□□□ 0.26
R3HDM1-213ENST00000463230 BBOX1O75936 387 aa16.65■□□□□ 0.26
R3HDM1-213ENST00000463230 IGKV5-2P06315 115 aa16.65■□□□□ 0.26
R3HDM1-213ENST00000463230 C3orf67Q6ZVT6 689 aa16.65■□□□□ 0.26
R3HDM1-213ENST00000463230 LINS1Q8NG48 757 aa16.65■□□□□ 0.26
R3HDM1-213ENST00000463230 FAM89AQ96GI7 184 aa16.65■□□□□ 0.26
R3HDM1-213ENST00000463230 NEURL1BA8MQ27 555 aa16.65■□□□□ 0.26
R3HDM1-213ENST00000463230 DDX46Q7L014 1031 aaKnown RBP16.65■□□□□ 0.26
R3HDM1-213ENST00000463230 CDCA7LQ96GN5 454 aa16.65■□□□□ 0.26
R3HDM1-213ENST00000463230 RNF181Q9P0P0 153 aa16.65■□□□□ 0.26
R3HDM1-213ENST00000463230 PPEF1O14829 653 aaPredicted RBP16.64■□□□□ 0.25
R3HDM1-213ENST00000463230 RASSF7Q02833 373 aa16.64■□□□□ 0.25
R3HDM1-213ENST00000463230 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
R3HDM1-213ENST00000463230 SNED1Q8TER0 1413 aa16.64■□□□□ 0.25
R3HDM1-213ENST00000463230 ABCC4O15439 1325 aa16.64■□□□□ 0.25
R3HDM1-213ENST00000463230 PTPRCP08575 1304 aa16.64■□□□□ 0.25
R3HDM1-213ENST00000463230 FKBP4Q02790 459 aaKnown RBP eCLIP16.64■□□□□ 0.25
R3HDM1-213ENST00000463230 SYNE4Q8N205 404 aa16.64■□□□□ 0.25
R3HDM1-213ENST00000463230 CCDC88AQ3V6T2 1871 aa16.63■□□□□ 0.25
R3HDM1-213ENST00000463230 TIAM2Q8IVF5 1701 aa16.63■□□□□ 0.25
R3HDM1-213ENST00000463230 PDE8AO60658 829 aa16.63■□□□□ 0.25
R3HDM1-213ENST00000463230 GRAPQ13588 217 aa16.63■□□□□ 0.25
R3HDM1-213ENST00000463230 MRPL50Q8N5N7 158 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms