RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 IL17RAQ96F46 866 aa12.37□□□□□ -0.43
MSH5-211ENST00000463144 KAT6BQ8WYB5 2073 aa12.37□□□□□ -0.43
MSH5-211ENST00000463144 DOT1LQ8TEK3 1739 aa12.37□□□□□ -0.43
MSH5-211ENST00000463144 TFCP2Q12800 502 aa12.37□□□□□ -0.43
MSH5-211ENST00000463144 GPATCH3Q96I76 525 aa12.37□□□□□ -0.43
MSH5-211ENST00000463144 PRIM1P49642 420 aaKnown RBP12.36□□□□□ -0.43
MSH5-211ENST00000463144 PIP4K2BP78356 416 aa12.36□□□□□ -0.43
MSH5-211ENST00000463144 TCIRG1Q13488 830 aa12.36□□□□□ -0.43
MSH5-211ENST00000463144 CWC27Q6UX04 472 aaKnown RBP12.36□□□□□ -0.43
MSH5-211ENST00000463144 LSG1Q9H089 658 aaKnown RBP12.36□□□□□ -0.43
MSH5-211ENST00000463144 CIZ1Q9ULV3 898 aaPredicted RBP12.36□□□□□ -0.43
MSH5-211ENST00000463144 NUTM2BA6NNL0 878 aaPredicted RBP12.36□□□□□ -0.43
MSH5-211ENST00000463144 NUTM2EB1AL46 878 aaPredicted RBP12.36□□□□□ -0.43
MSH5-211ENST00000463144 EPB41L2O43491 1005 aaKnown RBP12.36□□□□□ -0.43
MSH5-211ENST00000463144 STARD3NLO95772 234 aa12.36□□□□□ -0.43
MSH5-211ENST00000463144 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
MSH5-211ENST00000463144 ANAPC15P60006 121 aa12.36□□□□□ -0.43
MSH5-211ENST00000463144 NUTM2AQ8IVF1 878 aaPredicted RBP12.36□□□□□ -0.43
MSH5-211ENST00000463144 ZNF330Q9Y3S2 320 aaPredicted RBP12.36□□□□□ -0.43
MSH5-211ENST00000463144 ST18O60284 1047 aa12.35□□□□□ -0.43
MSH5-211ENST00000463144 HSP90AA1P07900 732 aaKnown RBP12.35□□□□□ -0.43
MSH5-211ENST00000463144 MCCP23508 829 aa12.35□□□□□ -0.43
MSH5-211ENST00000463144 MCM4P33991 863 aa12.35□□□□□ -0.43
MSH5-211ENST00000463144 HSPA4P34932 840 aa12.35□□□□□ -0.43
MSH5-211ENST00000463144 TNNI3KQ59H18 835 aa12.35□□□□□ -0.43
MSH5-211ENST00000463144 SYTL4Q96C24 671 aaPredicted RBP12.35□□□□□ -0.43
MSH5-211ENST00000463144 EVI5LQ96CN4 794 aa12.35□□□□□ -0.43
MSH5-211ENST00000463144 FPGT-TNNI3KV9GXZ4 949 aa12.35□□□□□ -0.43
MSH5-211ENST00000463144 NEK4P51957 841 aa12.35□□□□□ -0.43
MSH5-211ENST00000463144 TRIM28Q13263 835 aaKnown RBP12.35□□□□□ -0.43
MSH5-211ENST00000463144 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
MSH5-211ENST00000463144 BOLA2Q9H3K6 86 aa12.35□□□□□ -0.43
MSH5-211ENST00000463144 DBNLQ9UJU6 430 aaKnown RBP12.35□□□□□ -0.43
MSH5-211ENST00000463144 THRAP3Q9Y2W1 955 aaKnown RBP12.35□□□□□ -0.43
MSH5-211ENST00000463144 RAD50Q92878 1312 aa12.34□□□□□ -0.43
MSH5-211ENST00000463144 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
MSH5-211ENST00000463144 TNPO1Q92973 898 aaKnown RBP12.34□□□□□ -0.43
MSH5-211ENST00000463144 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
MSH5-211ENST00000463144 GSE1Q14687 1217 aa12.34□□□□□ -0.43
MSH5-211ENST00000463144 HLFQ16534 295 aa12.34□□□□□ -0.43
MSH5-211ENST00000463144 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
MSH5-211ENST00000463144 DIAPH3Q9NSV4 1193 aa12.34□□□□□ -0.43
MSH5-211ENST00000463144 SPATA31A5Q5VU36 1347 aa12.33□□□□□ -0.44
MSH5-211ENST00000463144 MAP3K15Q6ZN16 1313 aa12.33□□□□□ -0.44
MSH5-211ENST00000463144 SPATA31A7Q8IWB4 1347 aa12.33□□□□□ -0.44
MSH5-211ENST00000463144 SLIT2O94813 1529 aa12.33□□□□□ -0.44
MSH5-211ENST00000463144 DDB1Q16531 1140 aa12.33□□□□□ -0.44
MSH5-211ENST00000463144 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
MSH5-211ENST00000463144 MARCH10Q8NA82 808 aaPredicted RBP12.33□□□□□ -0.44
MSH5-211ENST00000463144 ZNF594Q96JF6 807 aaPredicted RBP12.33□□□□□ -0.44
MSH5-211ENST00000463144 ZBTB1Q9Y2K1 713 aa12.33□□□□□ -0.44
MSH5-211ENST00000463144 NWD2Q9ULI1 1742 aa12.33□□□□□ -0.44
MSH5-211ENST00000463144 ATP5JP18859 108 aa12.32□□□□□ -0.44
MSH5-211ENST00000463144 PTH1RQ03431 593 aa12.32□□□□□ -0.44
MSH5-211ENST00000463144 GIGYF2Q6Y7W6 1299 aaKnown RBP12.32□□□□□ -0.44
MSH5-211ENST00000463144 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
MSH5-211ENST00000463144 DBNDD2Q9BQY9 259 aa12.32□□□□□ -0.44
MSH5-211ENST00000463144 ZGPATQ8N5A5 531 aaKnown RBP12.32□□□□□ -0.44
MSH5-211ENST00000463144 EDC3Q96F86 508 aaKnown RBP12.32□□□□□ -0.44
MSH5-211ENST00000463144 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
MSH5-211ENST00000463144 FAM227BQ96M60 508 aa12.32□□□□□ -0.44
MSH5-211ENST00000463144 SNX14Q9Y5W7 946 aa12.32□□□□□ -0.44
MSH5-211ENST00000463144 PCCAP05165 728 aaPredicted RBP12.31□□□□□ -0.44
MSH5-211ENST00000463144 NMIQ13287 307 aaPredicted RBP12.31□□□□□ -0.44
MSH5-211ENST00000463144 LRRC24Q50LG9 513 aa12.31□□□□□ -0.44
MSH5-211ENST00000463144 SYNE4Q8N205 404 aa12.31□□□□□ -0.44
MSH5-211ENST00000463144 RUFY2Q8WXA3 655 aa12.31□□□□□ -0.44
MSH5-211ENST00000463144 ACSBG1Q96GR2 724 aa12.31□□□□□ -0.44
MSH5-211ENST00000463144 ARXQ96QS3 562 aa12.31□□□□□ -0.44
MSH5-211ENST00000463144 UPF3BQ9BZI7 483 aaKnown RBP12.31□□□□□ -0.44
MSH5-211ENST00000463144 KIAA1211Q6ZU35 1233 aa12.31□□□□□ -0.44
MSH5-211ENST00000463144 TMX3Q96JJ7 454 aa12.31□□□□□ -0.44
MSH5-211ENST00000463144 PUS3Q9BZE2 481 aaKnown RBP12.31□□□□□ -0.44
MSH5-211ENST00000463144 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
MSH5-211ENST00000463144 ANKRD36CQ5JPF3 1778 aa12.31□□□□□ -0.44
MSH5-211ENST00000463144 NUP98P52948 1817 aa12.31□□□□□ -0.44
MSH5-211ENST00000463144 EYA2O00167 538 aa12.3□□□□□ -0.44
MSH5-211ENST00000463144 SSFA2P28290 1259 aa12.3□□□□□ -0.44
MSH5-211ENST00000463144 ZBTB38Q8NAP3 1195 aaPredicted RBP12.3□□□□□ -0.44
MSH5-211ENST00000463144 A0A0D9SFI3 127 aa12.3□□□□□ -0.44
MSH5-211ENST00000463144 IL15P40933 162 aaPredicted RBP12.3□□□□□ -0.44
MSH5-211ENST00000463144 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
MSH5-211ENST00000463144 NLRP10Q86W26 655 aa12.3□□□□□ -0.44
MSH5-211ENST00000463144 FSD1Q9BTV5 496 aa12.3□□□□□ -0.44
MSH5-211ENST00000463144 PLA2G12BQ9BX93 195 aa12.3□□□□□ -0.44
MSH5-211ENST00000463144 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
MSH5-211ENST00000463144 CSF1RP07333 972 aa12.29□□□□□ -0.44
MSH5-211ENST00000463144 GPTP24298 496 aa12.29□□□□□ -0.44
MSH5-211ENST00000463144 MCM2P49736 904 aa12.29□□□□□ -0.44
MSH5-211ENST00000463144 TIMM10P62072 90 aa12.29□□□□□ -0.44
MSH5-211ENST00000463144 CUL4AQ13619 759 aa12.29□□□□□ -0.44
MSH5-211ENST00000463144 GPR108Q9NPR9 543 aa12.29□□□□□ -0.44
MSH5-211ENST00000463144 CCDC9Q9Y3X0 531 aaKnown RBP12.29□□□□□ -0.44
MSH5-211ENST00000463144 HIP1O00291 1037 aa12.28□□□□□ -0.44
MSH5-211ENST00000463144 CIAO1O76071 339 aa12.28□□□□□ -0.44
MSH5-211ENST00000463144 CYP2E1P05181 493 aaPredicted RBP12.28□□□□□ -0.44
MSH5-211ENST00000463144 IL6STP40189 918 aaPredicted RBP12.28□□□□□ -0.44
MSH5-211ENST00000463144 PKP1Q13835 747 aa12.28□□□□□ -0.44
MSH5-211ENST00000463144 NECTIN1Q15223 517 aa12.28□□□□□ -0.44
MSH5-211ENST00000463144 INTS5Q6P9B9 1019 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms