RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ALDH1A1P00352 501 aa8.55□□□□□ -1.04
COPS3-205ENST00000463097 TAF1CQ15572 869 aaPredicted RBP8.55□□□□□ -1.04
COPS3-205ENST00000463097 USPL1Q5W0Q7 1092 aa8.55□□□□□ -1.04
COPS3-205ENST00000463097 RHPN1Q8TCX5 695 aa8.55□□□□□ -1.04
COPS3-205ENST00000463097 EPS8L3Q8TE67 593 aaKnown RBP8.55□□□□□ -1.04
COPS3-205ENST00000463097 C7orf43Q8WVR3 580 aa8.55□□□□□ -1.04
COPS3-205ENST00000463097 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
COPS3-205ENST00000463097 TGFBR3LH3BV60 316 aa8.54□□□□□ -1.04
COPS3-205ENST00000463097 GNASQ5JWF2 1037 aa8.54□□□□□ -1.04
COPS3-205ENST00000463097 SOGA3Q5TF21 947 aa8.54□□□□□ -1.04
COPS3-205ENST00000463097 XKR5Q6UX68 686 aa8.54□□□□□ -1.04
COPS3-205ENST00000463097 PI16Q6UXB8 463 aa8.54□□□□□ -1.04
COPS3-205ENST00000463097 PMFBP1Q8TBY8 1022 aa8.54□□□□□ -1.04
COPS3-205ENST00000463097 ITPKCQ96DU7 683 aa8.54□□□□□ -1.04
COPS3-205ENST00000463097 ZNF395Q9H8N7 513 aaPredicted RBP8.54□□□□□ -1.04
COPS3-205ENST00000463097 FOXD3Q9UJU5 478 aaPredicted RBP8.54□□□□□ -1.04
COPS3-205ENST00000463097 TMA7Q9Y2S6 64 aaKnown RBP8.54□□□□□ -1.04
COPS3-205ENST00000463097 WASF2Q9Y6W5 498 aa8.54□□□□□ -1.04
COPS3-205ENST00000463097 TLDC2A0PJX2 215 aa8.53□□□□□ -1.04
COPS3-205ENST00000463097 ANKRD62A6NC57 917 aa8.53□□□□□ -1.04
COPS3-205ENST00000463097 IRS1P35568 1242 aa8.53□□□□□ -1.04
COPS3-205ENST00000463097 RELBQ01201 579 aa8.53□□□□□ -1.04
COPS3-205ENST00000463097 SUSD3Q96L08 255 aa8.53□□□□□ -1.04
COPS3-205ENST00000463097 HIRIP3Q9BW71 556 aaPredicted RBP8.53□□□□□ -1.04
COPS3-205ENST00000463097 ZFYVE28Q9HCC9 887 aa8.53□□□□□ -1.04
COPS3-205ENST00000463097 FAM8A1Q9UBU6 413 aa8.53□□□□□ -1.04
COPS3-205ENST00000463097 DMGDHQ9UI17 866 aaKnown RBP8.53□□□□□ -1.04
COPS3-205ENST00000463097 FNDC3AQ9Y2H6 1198 aaKnown RBP8.53□□□□□ -1.04
COPS3-205ENST00000463097 PLA2G4AP47712 749 aa8.52□□□□□ -1.05
COPS3-205ENST00000463097 ST13P50502 369 aaKnown RBP8.52□□□□□ -1.05
COPS3-205ENST00000463097 NBPF1Q3BBV0 1214 aa8.52□□□□□ -1.05
COPS3-205ENST00000463097 MEI1Q5TIA1 1274 aa8.52□□□□□ -1.05
COPS3-205ENST00000463097 IER5Q5VY09 327 aa8.52□□□□□ -1.05
COPS3-205ENST00000463097 SNX29Q8TEQ0 813 aa8.52□□□□□ -1.05
COPS3-205ENST00000463097 KLF16Q9BXK1 252 aaPredicted RBP8.52□□□□□ -1.05
COPS3-205ENST00000463097 GRIP2Q9C0E4 1043 aa8.52□□□□□ -1.05
COPS3-205ENST00000463097 ZIC2O95409 532 aaPredicted RBP8.51□□□□□ -1.05
COPS3-205ENST00000463097 GPC1P35052 558 aa8.51□□□□□ -1.05
COPS3-205ENST00000463097 IDH3AP50213 366 aa8.51□□□□□ -1.05
COPS3-205ENST00000463097 C4orf17Q53FE4 359 aa8.51□□□□□ -1.05
COPS3-205ENST00000463097 SLC27A3Q5K4L6 730 aa8.51□□□□□ -1.05
COPS3-205ENST00000463097 ZNF438Q7Z4V0 828 aa8.51□□□□□ -1.05
COPS3-205ENST00000463097 MCF2L2Q86YR7 1114 aa8.51□□□□□ -1.05
COPS3-205ENST00000463097 AIDAQ96BJ3 306 aa8.51□□□□□ -1.05
COPS3-205ENST00000463097 ZDHHC3Q9NYG2 299 aa8.51□□□□□ -1.05
COPS3-205ENST00000463097 STK10O94804 968 aaKnown RBP8.5□□□□□ -1.05
COPS3-205ENST00000463097 USP17L7P0C7H9 530 aa8.5□□□□□ -1.05
COPS3-205ENST00000463097 SLC19A1P41440 591 aa8.5□□□□□ -1.05
COPS3-205ENST00000463097 GJA8P48165 433 aa8.5□□□□□ -1.05
COPS3-205ENST00000463097 PDE12Q6L8Q7 609 aaKnown RBP8.5□□□□□ -1.05
COPS3-205ENST00000463097 ZNF280CQ8ND82 737 aa8.5□□□□□ -1.05
COPS3-205ENST00000463097 SRCIN1Q9C0H9 1055 aa8.5□□□□□ -1.05
COPS3-205ENST00000463097 ZSWIM4Q9H7M6 989 aa8.5□□□□□ -1.05
COPS3-205ENST00000463097 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
COPS3-205ENST00000463097 ANKIB1Q9P2G1 1089 aa8.5□□□□□ -1.05
COPS3-205ENST00000463097 HCSTQ9UBK5 93 aa8.5□□□□□ -1.05
COPS3-205ENST00000463097 GPC6Q9Y625 555 aaPredicted RBP8.5□□□□□ -1.05
COPS3-205ENST00000463097 V9GY48 417 aaPredicted RBP8.5□□□□□ -1.05
COPS3-205ENST00000463097 PHACTR2O75167 634 aa8.49□□□□□ -1.05
COPS3-205ENST00000463097 FGRP09769 529 aa8.49□□□□□ -1.05
COPS3-205ENST00000463097 ATF4P18848 351 aaPredicted RBP8.49□□□□□ -1.05
COPS3-205ENST00000463097 INPP5BP32019 993 aa8.49□□□□□ -1.05
COPS3-205ENST00000463097 ARSDP51689 593 aa8.49□□□□□ -1.05
COPS3-205ENST00000463097 WDR4P57081 412 aaKnown RBP8.49□□□□□ -1.05
COPS3-205ENST00000463097 ANKRD13AQ8IZ07 590 aa8.49□□□□□ -1.05
COPS3-205ENST00000463097 KLRG1Q96E93 195 aa8.49□□□□□ -1.05
COPS3-205ENST00000463097 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.49□□□□□ -1.05
COPS3-205ENST00000463097 PIF1Q9H611 641 aa8.49□□□□□ -1.05
COPS3-205ENST00000463097 ELP3Q9H9T3 547 aa8.49□□□□□ -1.05
COPS3-205ENST00000463097 USP20Q9Y2K6 914 aa8.49□□□□□ -1.05
COPS3-205ENST00000463097 RTCBQ9Y3I0 505 aaKnown RBP8.49□□□□□ -1.05
COPS3-205ENST00000463097 UBAP1LF5GYI3 381 aa8.48□□□□□ -1.05
COPS3-205ENST00000463097 TATP17735 454 aaPredicted RBP8.48□□□□□ -1.05
COPS3-205ENST00000463097 RNF144AP50876 292 aaPredicted RBP8.48□□□□□ -1.05
COPS3-205ENST00000463097 PAK2Q13177 524 aa8.48□□□□□ -1.05
COPS3-205ENST00000463097 NBPF10Q6P3W6 841 aaKnown RBP8.48□□□□□ -1.05
COPS3-205ENST00000463097 NXPE4Q6UWF7 544 aa8.48□□□□□ -1.05
COPS3-205ENST00000463097 ZNF662Q6ZS27 426 aa8.48□□□□□ -1.05
COPS3-205ENST00000463097 ERMP1Q7Z2K6 904 aa8.48□□□□□ -1.05
COPS3-205ENST00000463097 CMTR1Q8N1G2 835 aaKnown RBP8.48□□□□□ -1.05
COPS3-205ENST00000463097 HSH2DQ96JZ2 352 aa8.48□□□□□ -1.05
COPS3-205ENST00000463097 BCO2Q9BYV7 579 aa8.48□□□□□ -1.05
COPS3-205ENST00000463097 NPHS2Q9NP85 383 aa8.48□□□□□ -1.05
COPS3-205ENST00000463097 TRIP4Q15650 581 aaPredicted RBP8.47□□□□□ -1.05
COPS3-205ENST00000463097 GPRASP2Q96D09 838 aa8.47□□□□□ -1.05
COPS3-205ENST00000463097 OSBPL2Q9H1P3 480 aa8.47□□□□□ -1.05
COPS3-205ENST00000463097 COPRSQ9NQ92 184 aa8.47□□□□□ -1.05
COPS3-205ENST00000463097 TMEM63CQ9P1W3 806 aa8.47□□□□□ -1.05
COPS3-205ENST00000463097 KCNMB2Q9Y691 235 aa8.47□□□□□ -1.05
COPS3-205ENST00000463097 POLR3DP05423 398 aaPredicted RBP8.46□□□□□ -1.06
COPS3-205ENST00000463097 TIMP2P16035 220 aa8.46□□□□□ -1.06
COPS3-205ENST00000463097 SPRYD7Q5W111 196 aa8.46□□□□□ -1.06
COPS3-205ENST00000463097 BICDL1Q6ZP65 573 aa8.46□□□□□ -1.06
COPS3-205ENST00000463097 BTLAQ7Z6A9 289 aa8.46□□□□□ -1.06
COPS3-205ENST00000463097 GALNT12Q8IXK2 581 aa8.46□□□□□ -1.06
COPS3-205ENST00000463097 SNIP1Q8TAD8 396 aaKnown RBP8.46□□□□□ -1.06
COPS3-205ENST00000463097 TBX22Q9Y458 520 aa8.46□□□□□ -1.06
COPS3-205ENST00000463097 GADD45BO75293 160 aaPredicted RBP8.45□□□□□ -1.06
COPS3-205ENST00000463097 PHKA2P46019 1235 aa8.45□□□□□ -1.06
COPS3-205ENST00000463097 SDE2Q6IQ49 451 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms