RNA–Protein interactions for RNA: ENST00000462944.1

MDH1-209, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-209ENST00000462944 LMOD1P29536 600 aaPredicted RBP12.2□□□□□ -0.46
MDH1-209ENST00000462944 MLLT1Q03111 559 aaPredicted RBP12.2□□□□□ -0.46
MDH1-209ENST00000462944 ABT1Q9ULW3 272 aaKnown RBP12.2□□□□□ -0.46
MDH1-209ENST00000462944 ZNF541Q9H0D2 1346 aa12.19□□□□□ -0.46
MDH1-209ENST00000462944 A1BGP04217 495 aa12.19□□□□□ -0.46
MDH1-209ENST00000462944 MAP2K2P36507 400 aa12.19□□□□□ -0.46
MDH1-209ENST00000462944 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
MDH1-209ENST00000462944 FAM161AQ3B820 660 aa12.19□□□□□ -0.46
MDH1-209ENST00000462944 CCDC24Q8N4L8 307 aa12.19□□□□□ -0.46
MDH1-209ENST00000462944 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
MDH1-209ENST00000462944 DDX21Q9NR30 783 aaKnown RBP eCLIP12.19□□□□□ -0.46
MDH1-209ENST00000462944 RIC1Q4ADV7 1423 aa12.19□□□□□ -0.46
MDH1-209ENST00000462944 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
MDH1-209ENST00000462944 RNF123Q5XPI4 1314 aa12.18□□□□□ -0.46
MDH1-209ENST00000462944 BTBD11A6QL63 1104 aa12.18□□□□□ -0.46
MDH1-209ENST00000462944 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
MDH1-209ENST00000462944 USP50Q70EL3 339 aaPredicted RBP12.18□□□□□ -0.46
MDH1-209ENST00000462944 NYXQ9GZU5 481 aa12.18□□□□□ -0.46
MDH1-209ENST00000462944 VPS33BQ9H267 617 aa12.18□□□□□ -0.46
MDH1-209ENST00000462944 ZNF277Q9NRM2 450 aaPredicted RBP12.18□□□□□ -0.46
MDH1-209ENST00000462944 COL3A1P02461 1466 aaPredicted RBP12.18□□□□□ -0.46
MDH1-209ENST00000462944 LTBP1Q14766 1721 aa12.17□□□□□ -0.46
MDH1-209ENST00000462944 MAP1SQ66K74 1059 aaPredicted RBP12.17□□□□□ -0.46
MDH1-209ENST00000462944 SYNE4Q8N205 404 aa12.17□□□□□ -0.46
MDH1-209ENST00000462944 HHIPL1Q96JK4 782 aa12.17□□□□□ -0.46
MDH1-209ENST00000462944 SNED1Q8TER0 1413 aa12.17□□□□□ -0.46
MDH1-209ENST00000462944 IBTKQ9P2D0 1353 aaPredicted RBP12.17□□□□□ -0.46
MDH1-209ENST00000462944 ANKRD36CQ5JPF3 1778 aa12.16□□□□□ -0.46
MDH1-209ENST00000462944 DLG5Q8TDM6 1919 aa12.16□□□□□ -0.46
MDH1-209ENST00000462944 CRY2Q49AN0 593 aa12.16□□□□□ -0.46
MDH1-209ENST00000462944 CAPNS2Q96L46 248 aa12.16□□□□□ -0.46
MDH1-209ENST00000462944 GPR101Q96P66 508 aaPredicted RBP12.16□□□□□ -0.46
MDH1-209ENST00000462944 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
MDH1-209ENST00000462944 GTF2E1P29083 439 aaPredicted RBP12.15□□□□□ -0.46
MDH1-209ENST00000462944 USP16Q9Y5T5 823 aa12.15□□□□□ -0.46
MDH1-209ENST00000462944 TLL2Q9Y6L7 1015 aa12.15□□□□□ -0.46
MDH1-209ENST00000462944 POLR2AP24928 1970 aaKnown RBP12.15□□□□□ -0.46
MDH1-209ENST00000462944 CCDC85CA6NKD9 419 aa12.14□□□□□ -0.47
MDH1-209ENST00000462944 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
MDH1-209ENST00000462944 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
MDH1-209ENST00000462944 CDHR2Q9BYE9 1310 aa12.13□□□□□ -0.47
MDH1-209ENST00000462944 ERVV-1B6SEH8 477 aa12.13□□□□□ -0.47
MDH1-209ENST00000462944 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
MDH1-209ENST00000462944 PER1O15534 1290 aaPredicted RBP12.13□□□□□ -0.47
MDH1-209ENST00000462944 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
MDH1-209ENST00000462944 HOXA10P31260 410 aaPredicted RBP12.13□□□□□ -0.47
MDH1-209ENST00000462944 PAXIP1Q6ZW49 1069 aaPredicted RBP12.13□□□□□ -0.47
MDH1-209ENST00000462944 RTF1Q92541 710 aaKnown RBP12.13□□□□□ -0.47
MDH1-209ENST00000462944 RPGRQ92834 1020 aaKnown RBP12.13□□□□□ -0.47
MDH1-209ENST00000462944 TMX4Q9H1E5 349 aaPredicted RBP12.13□□□□□ -0.47
MDH1-209ENST00000462944 PRKRIP1Q9H875 184 aaPredicted RBP12.13□□□□□ -0.47
MDH1-209ENST00000462944 SCNN1DP51172 638 aa12.12□□□□□ -0.47
MDH1-209ENST00000462944 BRPF1P55201 1214 aaPredicted RBP12.12□□□□□ -0.47
MDH1-209ENST00000462944 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
MDH1-209ENST00000462944 LARGE2Q8N3Y3 721 aa12.12□□□□□ -0.47
MDH1-209ENST00000462944 CFAP53Q96M91 514 aa12.12□□□□□ -0.47
MDH1-209ENST00000462944 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
MDH1-209ENST00000462944 CRAMP1Q96RY5 1269 aa12.12□□□□□ -0.47
MDH1-209ENST00000462944 ADARB2Q9NS39 739 aaKnown RBP12.12□□□□□ -0.47
MDH1-209ENST00000462944 GJA3Q9Y6H8 435 aa12.12□□□□□ -0.47
MDH1-209ENST00000462944 LAMB2P55268 1798 aa12.12□□□□□ -0.47
MDH1-209ENST00000462944 PDE4DIPQ5VU43 2346 aa12.11□□□□□ -0.47
MDH1-209ENST00000462944 SUPT20HQ8NEM7 779 aa12.11□□□□□ -0.47
MDH1-209ENST00000462944 ZC3H15Q8WU90 426 aaKnown RBP12.11□□□□□ -0.47
MDH1-209ENST00000462944 RBM17Q96I25 401 aaKnown RBP12.11□□□□□ -0.47
MDH1-209ENST00000462944 NUDCQ9Y266 331 aa12.11□□□□□ -0.47
MDH1-209ENST00000462944 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
MDH1-209ENST00000462944 CST9Q5W186 159 aa12.1□□□□□ -0.47
MDH1-209ENST00000462944 CYP4F22Q6NT55 531 aa12.1□□□□□ -0.47
MDH1-209ENST00000462944 SAPCD2Q86UD0 394 aa12.1□□□□□ -0.47
MDH1-209ENST00000462944 COL4A5P29400 1685 aa12.1□□□□□ -0.47
MDH1-209ENST00000462944 KCNQ3O43525 872 aa12.09□□□□□ -0.47
MDH1-209ENST00000462944 PRKAR2BP31323 418 aa12.09□□□□□ -0.47
MDH1-209ENST00000462944 EPS15P42566 896 aa12.09□□□□□ -0.47
MDH1-209ENST00000462944 CC2D1BQ5T0F9 858 aaKnown RBP12.09□□□□□ -0.47
MDH1-209ENST00000462944 OLFM4Q6UX06 510 aa12.09□□□□□ -0.47
MDH1-209ENST00000462944 PNISRQ8TF01 805 aaKnown RBP12.09□□□□□ -0.47
MDH1-209ENST00000462944 RSPH6AQ9H0K4 717 aa12.09□□□□□ -0.47
MDH1-209ENST00000462944 GPRC5DQ9NZD1 345 aa12.09□□□□□ -0.47
MDH1-209ENST00000462944 PGAP2Q9UHJ9 254 aa12.09□□□□□ -0.47
MDH1-209ENST00000462944 NBPF26B4DH59 902 aa12.08□□□□□ -0.48
MDH1-209ENST00000462944 PPEF1O14829 653 aaPredicted RBP12.08□□□□□ -0.48
MDH1-209ENST00000462944 NOGQ13253 232 aa12.08□□□□□ -0.48
MDH1-209ENST00000462944 NBPF10Q6P3W6 841 aaKnown RBP12.08□□□□□ -0.48
MDH1-209ENST00000462944 KIF6Q6ZMV9 814 aa12.08□□□□□ -0.48
MDH1-209ENST00000462944 NBPF15Q8N660 670 aa12.08□□□□□ -0.48
MDH1-209ENST00000462944 MCOLN1Q9GZU1 580 aa12.08□□□□□ -0.48
MDH1-209ENST00000462944 MAP3K15Q6ZN16 1313 aa12.08□□□□□ -0.48
MDH1-209ENST00000462944 PPIP5K2O43314 1243 aa12.07□□□□□ -0.48
MDH1-209ENST00000462944 PIP4K2AP48426 406 aaPredicted RBP12.07□□□□□ -0.48
MDH1-209ENST00000462944 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
MDH1-209ENST00000462944 HLFQ16534 295 aa12.07□□□□□ -0.48
MDH1-209ENST00000462944 CDC37L1Q7L3B6 337 aa12.07□□□□□ -0.48
MDH1-209ENST00000462944 PPP1R42Q7Z4L9 355 aa12.07□□□□□ -0.48
MDH1-209ENST00000462944 ERBB4Q15303 1308 aa12.07□□□□□ -0.48
MDH1-209ENST00000462944 ABCC12Q96J65 1359 aa12.06□□□□□ -0.48
MDH1-209ENST00000462944 FAM177BA6PVY3 158 aa12.06□□□□□ -0.48
MDH1-209ENST00000462944 CELF2O95319 508 aaKnown RBP12.06□□□□□ -0.48
MDH1-209ENST00000462944 GRM1Q13255 1194 aa12.06□□□□□ -0.48
MDH1-209ENST00000462944 TNIP1Q15025 636 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms