RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 GRNP28799 593 aaKnown RBP4.4□□□□□ -1.71
SMC4-203ENST00000462668 ALDH16A1Q8IZ83 802 aa4.4□□□□□ -1.71
SMC4-203ENST00000462668 PLEKHD1A6NEE1 506 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 RAB33AQ14088 237 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 NBPF15Q8N660 670 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 TMPRSS4Q9NRS4 437 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 TMEM260Q9NX78 707 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 ADAMTS1Q9UHI8 967 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 ZCRB1Q8TBF4 217 aaKnown RBP4.39□□□□□ -1.71
SMC4-203ENST00000462668 CCDC74AQ96AQ1 378 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 LRRC3Q9BY71 257 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 IL21Q9HBE4 155 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 PPP1R1BQ9UD71 204 aaPredicted RBP4.39□□□□□ -1.71
SMC4-203ENST00000462668 K7ELQ4 463 aaPredicted RBP4.39□□□□□ -1.71
SMC4-203ENST00000462668 STK10O94804 968 aaKnown RBP4.39□□□□□ -1.71
SMC4-203ENST00000462668 POU3F3P20264 500 aaPredicted RBP4.39□□□□□ -1.71
SMC4-203ENST00000462668 AMPD3Q01432 767 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 LINC01559Q495D7 138 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 SH3PXD2AQ5TCZ1 1133 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 CERS3Q8IU89 383 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 WNT2BQ93097 391 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 KLF16Q9BXK1 252 aaPredicted RBP4.39□□□□□ -1.71
SMC4-203ENST00000462668 ZNF408Q9H9D4 720 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 COPRSQ9NQ92 184 aa4.39□□□□□ -1.71
SMC4-203ENST00000462668 DNAJA1P31689 397 aaKnown RBP4.38□□□□□ -1.71
SMC4-203ENST00000462668 EAF1Q96JC9 268 aaPredicted RBP4.38□□□□□ -1.71
SMC4-203ENST00000462668 SERTM1A2A2V5 107 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 KCNQ2O43526 872 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 IFT43Q96FT9 208 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 SERTAD1Q9UHV2 236 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 KCNMB2Q9Y691 235 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 TNFRSF21O75509 655 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 CLN3Q13286 438 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 BMS1Q14692 1282 aaKnown RBP4.38□□□□□ -1.71
SMC4-203ENST00000462668 PLA2G2CQ5R387 149 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 VPS37DQ86XT2 251 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 ZNF669Q96BR6 464 aaPredicted RBP4.38□□□□□ -1.71
SMC4-203ENST00000462668 RIPOR2Q9Y4F9 1068 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 COL4A3BPQ9Y5P4 624 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 NR5A1Q13285 461 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 LCE2DQ5TA82 110 aaPredicted RBP4.38□□□□□ -1.71
SMC4-203ENST00000462668 RELTQ969Z4 430 aa4.38□□□□□ -1.71
SMC4-203ENST00000462668 EMID1Q96A84 441 aaPredicted RBP4.38□□□□□ -1.71
SMC4-203ENST00000462668 USPL1Q5W0Q7 1092 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 PMFBP1Q8TBY8 1022 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.37□□□□□ -1.713e-6■□□□□ 10.2
SMC4-203ENST00000462668 SNTG2Q9NY99 539 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 ADH1CP00326 375 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 IGBP1P78318 339 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMC4-203ENST00000462668 ARSHQ5FYA8 562 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 PDE12Q6L8Q7 609 aaKnown RBP4.37□□□□□ -1.71
SMC4-203ENST00000462668 SLITRK4Q8IW52 837 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 HS3ST6Q96QI5 342 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 GRIP2Q9C0E4 1043 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 IRF2BPLQ9H1B7 796 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 SUV39H2Q9H5I1 410 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 IFT57Q9NWB7 429 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 FCF1Q9Y324 198 aaKnown RBP4.37□□□□□ -1.71
SMC4-203ENST00000462668 HOXD8P13378 290 aaPredicted RBP4.37□□□□□ -1.71
SMC4-203ENST00000462668 INPP5BP32019 993 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 DGKZQ13574 1117 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 MEI1Q5TIA1 1274 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 KRT26Q7Z3Y9 468 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 EPS8L3Q8TE67 593 aaKnown RBP4.37□□□□□ -1.71
SMC4-203ENST00000462668 KLHL42Q9P2K6 505 aa4.37□□□□□ -1.71
SMC4-203ENST00000462668 COPS2P61201 443 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 NFX1Q12986 1120 aaKnown RBP4.36□□□□□ -1.71
SMC4-203ENST00000462668 CBLBQ13191 982 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 PI16Q6UXB8 463 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 VASH1Q7L8A9 365 aaPredicted RBP4.36□□□□□ -1.71
SMC4-203ENST00000462668 RBBP8NLQ8NC74 664 aaPredicted RBP4.36□□□□□ -1.71
SMC4-203ENST00000462668 TRPM4Q8TD43 1214 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 MRFAP1L1Q96HT8 127 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 SHDQ96IW2 340 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 IRS1P35568 1242 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 TRIP4Q15650 581 aaPredicted RBP4.36□□□□□ -1.71
SMC4-203ENST00000462668 TBCELQ5QJ74 424 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 SNX29Q8TEQ0 813 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 FAM13BQ9NYF5 915 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 ZDHHC3Q9NYG2 299 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 PPM1HQ9ULR3 514 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 TGFBR3LH3BV60 316 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 S1PR4O95977 384 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 PCNX4Q63HM2 1172 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 SV2BQ7L1I2 683 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 TREML1Q86YW5 311 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 NUDT16Q96DE0 195 aaKnown RBP4.36□□□□□ -1.71
SMC4-203ENST00000462668 CNTN3Q9P232 1028 aa4.36□□□□□ -1.71
SMC4-203ENST00000462668 SPATA31C2B4DYI2 1134 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 MICAL2O94851 1124 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 ADH1AP07327 375 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 GPC1P35052 558 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 ETFBP38117 255 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 TRIM32Q13049 653 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 GRIN2CQ14957 1233 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 CKAP2LQ8IYA6 745 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 NR3C2P08235 984 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 ANKLE1Q8NAG6 615 aa4.35□□□□□ -1.71
SMC4-203ENST00000462668 VTI1AQ96AJ9 217 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms