RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 C21orf2O43822 256 aa23.84■■□□□ 1.41
CDKN1A-206ENST00000462537 NLRP10Q86W26 655 aa23.84■■□□□ 1.41
CDKN1A-206ENST00000462537 SPINK5Q9NQ38 1064 aaPredicted RBP23.84■■□□□ 1.41
CDKN1A-206ENST00000462537 SLX4Q8IY92 1834 aa23.84■■□□□ 1.41
CDKN1A-206ENST00000462537 ADCY9O60503 1353 aa23.83■■□□□ 1.41
CDKN1A-206ENST00000462537 EXOSC9Q06265 439 aaKnown RBP23.83■■□□□ 1.41
CDKN1A-206ENST00000462537 PRPF40BQ6NWY9 871 aaKnown RBP23.83■■□□□ 1.41
CDKN1A-206ENST00000462537 ZNF428Q96B54 188 aa23.83■■□□□ 1.41
CDKN1A-206ENST00000462537 DDX58O95786 925 aaKnown RBP23.82■■□□□ 1.4
CDKN1A-206ENST00000462537 RASSF7Q02833 373 aa23.82■■□□□ 1.4
CDKN1A-206ENST00000462537 C9orf131Q5VYM1 1079 aa23.82■■□□□ 1.4
CDKN1A-206ENST00000462537 TRMT112Q9UI30 125 aaKnown RBP23.82■■□□□ 1.4
CDKN1A-206ENST00000462537 RIC1Q4ADV7 1423 aa23.82■■□□□ 1.4
CDKN1A-206ENST00000462537 ATP5J2-PTCD1G3V325 749 aa23.81■■□□□ 1.4
CDKN1A-206ENST00000462537 RPGRQ92834 1020 aaKnown RBP23.81■■□□□ 1.4
CDKN1A-206ENST00000462537 RNF123Q5XPI4 1314 aa23.81■■□□□ 1.4
CDKN1A-206ENST00000462537 SBF1O95248 1867 aa23.8■■□□□ 1.4
CDKN1A-206ENST00000462537 ZNF526Q8TF50 670 aaPredicted RBP23.8■■□□□ 1.4
CDKN1A-206ENST00000462537 RNF181Q9P0P0 153 aa23.8■■□□□ 1.4
CDKN1A-206ENST00000462537 ALDH1B1P30837 517 aa23.79■■□□□ 1.4
CDKN1A-206ENST00000462537 CRY2Q49AN0 593 aa23.79■■□□□ 1.4
CDKN1A-206ENST00000462537 NLRP3Q96P20 1036 aa23.79■■□□□ 1.4
CDKN1A-206ENST00000462537 SLC4A2P04920 1241 aa23.78■■□□□ 1.4
CDKN1A-206ENST00000462537 SOGA3Q5TF21 947 aa23.78■■□□□ 1.4
CDKN1A-206ENST00000462537 MYD88Q99836 296 aa23.78■■□□□ 1.4
CDKN1A-206ENST00000462537 ISCA1Q9BUE6 129 aa23.78■■□□□ 1.4
CDKN1A-206ENST00000462537 SH3TC1Q8TE82 1336 aa23.78■■□□□ 1.4
CDKN1A-206ENST00000462537 ZNF521Q96K83 1311 aa23.78■■□□□ 1.4
CDKN1A-206ENST00000462537 MIER1Q8N108 512 aa23.77■■□□□ 1.4
CDKN1A-206ENST00000462537 RBM17Q96I25 401 aaKnown RBP23.77■■□□□ 1.4
CDKN1A-206ENST00000462537 LAMB2P55268 1798 aa23.77■■□□□ 1.4
CDKN1A-206ENST00000462537 FER1L6Q2WGJ9 1857 aa23.77■■□□□ 1.4
CDKN1A-206ENST00000462537 NFKBIEO00221 500 aa23.76■■□□□ 1.39
CDKN1A-206ENST00000462537 VAMP4O75379 141 aa23.76■■□□□ 1.39
CDKN1A-206ENST00000462537 HCLS1P14317 486 aaPredicted RBP23.76■■□□□ 1.39
CDKN1A-206ENST00000462537 SLC10A5Q5PT55 438 aa23.76■■□□□ 1.39
CDKN1A-206ENST00000462537 C3orf67Q6ZVT6 689 aa23.76■■□□□ 1.39
CDKN1A-206ENST00000462537 SYNE4Q8N205 404 aa23.76■■□□□ 1.39
CDKN1A-206ENST00000462537 GPBP1L1Q9HC44 474 aaPredicted RBP23.76■■□□□ 1.39
CDKN1A-206ENST00000462537 CCDC88AQ3V6T2 1871 aa23.76■■□□□ 1.39
CDKN1A-206ENST00000462537 LMNB1P20700 586 aa23.75■■□□□ 1.39
CDKN1A-206ENST00000462537 MAP3K2Q9Y2U5 619 aa23.75■■□□□ 1.39
CDKN1A-206ENST00000462537 CCDC93Q567U6 631 aa23.74■■□□□ 1.39
CDKN1A-206ENST00000462537 FAM89AQ96GI7 184 aa23.74■■□□□ 1.39
CDKN1A-206ENST00000462537 DDX60Q8IY21 1712 aaKnown RBP23.73■■□□□ 1.39
CDKN1A-206ENST00000462537 CACNA1FO60840 1977 aa23.73■■□□□ 1.39
CDKN1A-206ENST00000462537 HOXA10P31260 410 aaPredicted RBP23.73■■□□□ 1.39
CDKN1A-206ENST00000462537 TRIM28Q13263 835 aaKnown RBP23.73■■□□□ 1.39
CDKN1A-206ENST00000462537 RTL5Q5HYW3 569 aaPredicted RBP23.73■■□□□ 1.39
CDKN1A-206ENST00000462537 KSR2Q6VAB6 950 aa23.73■■□□□ 1.39
CDKN1A-206ENST00000462537 G2E3Q7L622 706 aa23.73■■□□□ 1.39
CDKN1A-206ENST00000462537 METTL22Q9BUU2 404 aaPredicted RBP23.73■■□□□ 1.39
CDKN1A-206ENST00000462537 TAOK3Q9H2K8 898 aa23.73■■□□□ 1.39
CDKN1A-206ENST00000462537 TIAM2Q8IVF5 1701 aa23.73■■□□□ 1.39
CDKN1A-206ENST00000462537 PI4KAP2A4QPH2 592 aa23.72■■□□□ 1.39
CDKN1A-206ENST00000462537 PI4KAP1Q8N8J0 262 aa23.72■■□□□ 1.39
CDKN1A-206ENST00000462537 E9PSI1 815 aa23.71■■□□□ 1.39
CDKN1A-206ENST00000462537 NEXNQ0ZGT2 675 aa23.71■■□□□ 1.39
CDKN1A-206ENST00000462537 FLIIQ13045 1269 aa23.71■■□□□ 1.39
CDKN1A-206ENST00000462537 OLFM4Q6UX06 510 aa23.71■■□□□ 1.39
CDKN1A-206ENST00000462537 C7orf43Q8WVR3 580 aa23.71■■□□□ 1.39
CDKN1A-206ENST00000462537 CRAMP1Q96RY5 1269 aa23.71■■□□□ 1.39
CDKN1A-206ENST00000462537 PRELPP51888 382 aa23.7■■□□□ 1.38
CDKN1A-206ENST00000462537 FKBP5Q13451 457 aaPredicted RBP23.7■■□□□ 1.38
CDKN1A-206ENST00000462537 CCDC191Q8NCU4 936 aa23.7■■□□□ 1.38
CDKN1A-206ENST00000462537 CWC25Q9NXE8 425 aaPredicted RBP23.7■■□□□ 1.38
CDKN1A-206ENST00000462537 LTBP3Q9NS15 1303 aa23.69■■□□□ 1.38
CDKN1A-206ENST00000462537 PPEF1O14829 653 aaPredicted RBP23.69■■□□□ 1.38
CDKN1A-206ENST00000462537 RTKN2Q8IZC4 609 aa23.69■■□□□ 1.38
CDKN1A-206ENST00000462537 DDX46Q7L014 1031 aaKnown RBP23.68■■□□□ 1.38
CDKN1A-206ENST00000462537 ZBTB38Q8NAP3 1195 aaPredicted RBP23.68■■□□□ 1.38
CDKN1A-206ENST00000462537 DICER1Q9UPY3 1922 aaKnown RBP23.67■■□□□ 1.38
CDKN1A-206ENST00000462537 ABCC4O15439 1325 aa23.67■■□□□ 1.38
CDKN1A-206ENST00000462537 IRS4O14654 1257 aaPredicted RBP23.67■■□□□ 1.38
CDKN1A-206ENST00000462537 ZC3H4Q9UPT8 1303 aaKnown RBP23.66■■□□□ 1.38
CDKN1A-206ENST00000462537 FKBP4Q02790 459 aaKnown RBP eCLIP23.66■■□□□ 1.389e-7■■■■□ 21.3
CDKN1A-206ENST00000462537 SLFN5Q08AF3 891 aa23.66■■□□□ 1.38
CDKN1A-206ENST00000462537 TMX4Q9H1E5 349 aaPredicted RBP23.66■■□□□ 1.38
CDKN1A-206ENST00000462537 PCCAP05165 728 aaPredicted RBP23.65■■□□□ 1.38
CDKN1A-206ENST00000462537 IGKV5-2P06315 115 aa23.65■■□□□ 1.38
CDKN1A-206ENST00000462537 HSP90B1P14625 803 aaKnown RBP23.65■■□□□ 1.38
CDKN1A-206ENST00000462537 CC2D2BQ6DHV5 1058 aa23.65■■□□□ 1.38
CDKN1A-206ENST00000462537 JARID2Q92833 1246 aaPredicted RBP23.65■■□□□ 1.38
CDKN1A-206ENST00000462537 CDCA7LQ96GN5 454 aa23.65■■□□□ 1.38
CDKN1A-206ENST00000462537 KDM2BQ8NHM5 1336 aa23.64■■□□□ 1.38
CDKN1A-206ENST00000462537 CWF19L2Q2TBE0 894 aaKnown RBP23.64■■□□□ 1.37
CDKN1A-206ENST00000462537 DNAAF4Q8WXU2 420 aa23.64■■□□□ 1.37
CDKN1A-206ENST00000462537 TAF1P21675 1872 aa23.64■■□□□ 1.37
CDKN1A-206ENST00000462537 ZNF277Q9NRM2 450 aaPredicted RBP23.63■■□□□ 1.37
CDKN1A-206ENST00000462537 NEURL1BA8MQ27 555 aa23.62■■□□□ 1.37
CDKN1A-206ENST00000462537 GRAPQ13588 217 aa23.62■■□□□ 1.37
CDKN1A-206ENST00000462537 SF3B3Q15393 1217 aaKnown RBP23.62■■□□□ 1.37
CDKN1A-206ENST00000462537 SLC51AQ86UW1 340 aa23.62■■□□□ 1.37
CDKN1A-206ENST00000462537 GRAPLQ8TC17 118 aaPredicted RBP23.62■■□□□ 1.37
CDKN1A-206ENST00000462537 BBOX1O75936 387 aa23.61■■□□□ 1.37
CDKN1A-206ENST00000462537 GRIPAP1Q4V328 841 aa23.61■■□□□ 1.37
CDKN1A-206ENST00000462537 NMRK2Q9NPI5 230 aa23.61■■□□□ 1.37
CDKN1A-206ENST00000462537 ATP6V0A2Q9Y487 856 aa23.61■■□□□ 1.37
CDKN1A-206ENST00000462537 PSMD1Q99460 953 aa23.6■■□□□ 1.37
CDKN1A-206ENST00000462537 SNED1Q8TER0 1413 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms