RNA–Protein interactions for RNA: ENST00000461720.5

COL11A1-206, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-206ENST00000461720 GRIPAP1Q4V328 841 aa16.38■□□□□ 0.21
COL11A1-206ENST00000461720 COPS6Q7L5N1 327 aa16.38■□□□□ 0.21
COL11A1-206ENST00000461720 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
COL11A1-206ENST00000461720 ZNF277Q9NRM2 450 aaPredicted RBP16.38■□□□□ 0.21
COL11A1-206ENST00000461720 CEP350Q5VT06 3117 aa16.37■□□□□ 0.21
COL11A1-206ENST00000461720 DDNO94850 711 aaPredicted RBP16.37■□□□□ 0.21
COL11A1-206ENST00000461720 NTSR2O95665 410 aa16.37■□□□□ 0.21
COL11A1-206ENST00000461720 HOXB7P09629 217 aa16.37■□□□□ 0.21
COL11A1-206ENST00000461720 LRP10Q7Z4F1 713 aa16.37■□□□□ 0.21
COL11A1-206ENST00000461720 DNAJC5GQ8N7S2 189 aa16.37■□□□□ 0.21
COL11A1-206ENST00000461720 XAGE3Q8WTP9 111 aa16.37■□□□□ 0.21
COL11A1-206ENST00000461720 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
COL11A1-206ENST00000461720 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL11A1-206ENST00000461720 RNF123Q5XPI4 1314 aa16.37■□□□□ 0.21
COL11A1-206ENST00000461720 POTECB2RU33 542 aa16.36■□□□□ 0.21
COL11A1-206ENST00000461720 IARSP41252 1262 aaKnown RBP16.36■□□□□ 0.21
COL11A1-206ENST00000461720 CALD1Q05682 793 aaKnown RBP16.36■□□□□ 0.21
COL11A1-206ENST00000461720 HDGFL1Q5TGJ6 251 aa16.36■□□□□ 0.21
COL11A1-206ENST00000461720 OLFM4Q6UX06 510 aa16.36■□□□□ 0.21
COL11A1-206ENST00000461720 SYNE4Q8N205 404 aa16.36■□□□□ 0.21
COL11A1-206ENST00000461720 JDP2Q8WYK2 163 aa16.36■□□□□ 0.21
COL11A1-206ENST00000461720 CRAMP1Q96RY5 1269 aa16.36■□□□□ 0.21
COL11A1-206ENST00000461720 PSMD1Q99460 953 aa16.36■□□□□ 0.21
COL11A1-206ENST00000461720 PPEF1O14829 653 aaPredicted RBP16.34■□□□□ 0.21
COL11A1-206ENST00000461720 HTRA3P83110 453 aa16.34■□□□□ 0.21
COL11A1-206ENST00000461720 TCIRG1Q13488 830 aa16.34■□□□□ 0.21
COL11A1-206ENST00000461720 KRT24Q2M2I5 525 aa16.34■□□□□ 0.21
COL11A1-206ENST00000461720 SLC10A5Q5PT55 438 aa16.34■□□□□ 0.21
COL11A1-206ENST00000461720 KLRG1Q96E93 195 aa16.34■□□□□ 0.21
COL11A1-206ENST00000461720 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
COL11A1-206ENST00000461720 DBF4Q9UBU7 674 aaPredicted RBP16.34■□□□□ 0.21
COL11A1-206ENST00000461720 TRMT112Q9UI30 125 aaKnown RBP16.34■□□□□ 0.21
COL11A1-206ENST00000461720 APAF1O14727 1248 aa16.33■□□□□ 0.2
COL11A1-206ENST00000461720 ZEB1P37275 1124 aaPredicted RBP16.33■□□□□ 0.2
COL11A1-206ENST00000461720 CHADLQ6NUI6 762 aa16.33■□□□□ 0.2
COL11A1-206ENST00000461720 L3MBTL3Q96JM7 780 aaPredicted RBP16.33■□□□□ 0.2
COL11A1-206ENST00000461720 TCERG1O14776 1098 aaKnown RBP16.32■□□□□ 0.2
COL11A1-206ENST00000461720 GNAI1P63096 354 aa16.32■□□□□ 0.2
COL11A1-206ENST00000461720 DUSP27Q5VZP5 1158 aa16.32■□□□□ 0.2
COL11A1-206ENST00000461720 ANKRD13DQ6ZTN6 518 aa16.32■□□□□ 0.2
COL11A1-206ENST00000461720 NLRP10Q86W26 655 aa16.32■□□□□ 0.2
COL11A1-206ENST00000461720 PLBD2Q8NHP8 589 aa16.32■□□□□ 0.2
COL11A1-206ENST00000461720 MBIPQ9NS73 344 aa16.32■□□□□ 0.2
COL11A1-206ENST00000461720 HYPKQ9NX55 129 aa16.32■□□□□ 0.2
COL11A1-206ENST00000461720 SH3TC1Q8TE82 1336 aa16.31■□□□□ 0.2
COL11A1-206ENST00000461720 FZD9O00144 591 aa16.31■□□□□ 0.2
COL11A1-206ENST00000461720 EIF6P56537 245 aaKnown RBP16.31■□□□□ 0.2
COL11A1-206ENST00000461720 CHMP4AQ9BY43 222 aa16.31■□□□□ 0.2
COL11A1-206ENST00000461720 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
COL11A1-206ENST00000461720 HACL1Q9UJ83 578 aa16.31■□□□□ 0.2
COL11A1-206ENST00000461720 ZNF541Q9H0D2 1346 aa16.3■□□□□ 0.2
COL11A1-206ENST00000461720 BBOX1O75936 387 aa16.3■□□□□ 0.2
COL11A1-206ENST00000461720 C3orf67Q6ZVT6 689 aa16.3■□□□□ 0.2
COL11A1-206ENST00000461720 DDX46Q7L014 1031 aaKnown RBP16.3■□□□□ 0.2
COL11A1-206ENST00000461720 GPC2Q8N158 579 aa16.3■□□□□ 0.2
COL11A1-206ENST00000461720 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
COL11A1-206ENST00000461720 TAF1DQ9H5J8 278 aaPredicted RBP16.3■□□□□ 0.2
COL11A1-206ENST00000461720 SCN4AP35499 1836 aa16.3■□□□□ 0.2
COL11A1-206ENST00000461720 ANKRD36CQ5JPF3 1778 aa16.3■□□□□ 0.2
COL11A1-206ENST00000461720 HCLS1P14317 486 aaPredicted RBP16.29■□□□□ 0.2
COL11A1-206ENST00000461720 EAPPQ56P03 285 aaPredicted RBP16.29■□□□□ 0.2
COL11A1-206ENST00000461720 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
COL11A1-206ENST00000461720 LDHDQ86WU2 507 aa16.29■□□□□ 0.2
COL11A1-206ENST00000461720 SUPT20HQ8NEM7 779 aa16.29■□□□□ 0.2
COL11A1-206ENST00000461720 ATP6V0A2Q9Y487 856 aa16.29■□□□□ 0.2
COL11A1-206ENST00000461720 ABCC4O15439 1325 aa16.28■□□□□ 0.2
COL11A1-206ENST00000461720 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
COL11A1-206ENST00000461720 NIM1KQ8IY84 436 aa16.28■□□□□ 0.2
COL11A1-206ENST00000461720 JMYQ8N9B5 988 aa16.28■□□□□ 0.2
COL11A1-206ENST00000461720 VPS33BQ9H267 617 aa16.28■□□□□ 0.2
COL11A1-206ENST00000461720 CLEC11AQ9Y240 323 aa16.28■□□□□ 0.2
COL11A1-206ENST00000461720 POTEIP0CG38 1075 aa16.27■□□□□ 0.2
COL11A1-206ENST00000461720 POTEJP0CG39 1038 aa16.27■□□□□ 0.2
COL11A1-206ENST00000461720 LMOD1P29536 600 aaPredicted RBP16.27■□□□□ 0.2
COL11A1-206ENST00000461720 EPHX2P34913 555 aa16.27■□□□□ 0.2
COL11A1-206ENST00000461720 GOLGA2Q08379 1002 aa16.27■□□□□ 0.2
COL11A1-206ENST00000461720 GJA3Q9Y6H8 435 aa16.27■□□□□ 0.2
COL11A1-206ENST00000461720 SNED1Q8TER0 1413 aa16.27■□□□□ 0.19
COL11A1-206ENST00000461720 ELL2O00472 640 aaPredicted RBP16.26■□□□□ 0.19
COL11A1-206ENST00000461720 PPIP5K2O43314 1243 aa16.26■□□□□ 0.19
COL11A1-206ENST00000461720 DPP8Q6V1X1 898 aaPredicted RBP16.26■□□□□ 0.19
COL11A1-206ENST00000461720 RIC3Q7Z5B4 369 aa16.26■□□□□ 0.19
COL11A1-206ENST00000461720 SP8Q8IXZ3 490 aa16.26■□□□□ 0.19
COL11A1-206ENST00000461720 ATP5J2-PTCD1G3V325 749 aa16.25■□□□□ 0.19
COL11A1-206ENST00000461720 IFFO2Q5TF58 517 aa16.25■□□□□ 0.19
COL11A1-206ENST00000461720 TMC4Q7Z404 712 aa16.25■□□□□ 0.19
COL11A1-206ENST00000461720 MPNDQ8N594 471 aa16.25■□□□□ 0.19
COL11A1-206ENST00000461720 CREBZFQ9NS37 354 aa16.25■□□□□ 0.19
COL11A1-206ENST00000461720 HSP90B1P14625 803 aaKnown RBP16.24■□□□□ 0.19
COL11A1-206ENST00000461720 GRAPQ13588 217 aa16.24■□□□□ 0.19
COL11A1-206ENST00000461720 GRAPLQ8TC17 118 aaPredicted RBP16.24■□□□□ 0.19
COL11A1-206ENST00000461720 ZNF428Q96B54 188 aa16.24■□□□□ 0.19
COL11A1-206ENST00000461720 FAM89AQ96GI7 184 aa16.24■□□□□ 0.19
COL11A1-206ENST00000461720 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
COL11A1-206ENST00000461720 DDX58O95786 925 aaKnown RBP16.23■□□□□ 0.19
COL11A1-206ENST00000461720 TRIM28Q13263 835 aaKnown RBP16.23■□□□□ 0.19
COL11A1-206ENST00000461720 AOC3Q16853 763 aa16.23■□□□□ 0.19
COL11A1-206ENST00000461720 CCDC30Q5VVM6 783 aa16.23■□□□□ 0.19
COL11A1-206ENST00000461720 RTFDC1Q9BY42 306 aaPredicted RBP16.23■□□□□ 0.19
COL11A1-206ENST00000461720 ZNRF3Q9ULT6 936 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms