RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 SNED1Q8TER0 1413 aa18.39■□□□□ 0.53
PABPC4-208ENST00000461578 CCDC85CA6NKD9 419 aa18.38■□□□□ 0.53
PABPC4-208ENST00000461578 SLC34A2O95436 690 aa18.38■□□□□ 0.53
PABPC4-208ENST00000461578 BEGAINQ9BUH8 593 aa18.38■□□□□ 0.53
PABPC4-208ENST00000461578 TRAF5O00463 557 aa18.37■□□□□ 0.53
PABPC4-208ENST00000461578 TCERG1O14776 1098 aaKnown RBP18.37■□□□□ 0.53
PABPC4-208ENST00000461578 SCNN1DP51172 638 aa18.37■□□□□ 0.53
PABPC4-208ENST00000461578 LARGE2Q8N3Y3 721 aa18.37■□□□□ 0.53
PABPC4-208ENST00000461578 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
PABPC4-208ENST00000461578 CFAP53Q96M91 514 aa18.37■□□□□ 0.53
PABPC4-208ENST00000461578 TSKSQ9UJT2 592 aa18.37■□□□□ 0.53
PABPC4-208ENST00000461578 RGL2O15211 777 aa18.36■□□□□ 0.53
PABPC4-208ENST00000461578 U2AF1L5P0DN76 240 aaPredicted RBP18.36■□□□□ 0.53
PABPC4-208ENST00000461578 ECE1P42892 770 aa18.36■□□□□ 0.53
PABPC4-208ENST00000461578 U2AF1Q01081 240 aaKnown RBP eCLIP18.36■□□□□ 0.53
PABPC4-208ENST00000461578 CRY2Q49AN0 593 aa18.36■□□□□ 0.53
PABPC4-208ENST00000461578 RPGRQ92834 1020 aaKnown RBP18.36■□□□□ 0.53
PABPC4-208ENST00000461578 GPR101Q96P66 508 aaPredicted RBP18.36■□□□□ 0.53
PABPC4-208ENST00000461578 THSD7BQ9C0I4 1608 aa18.36■□□□□ 0.53
PABPC4-208ENST00000461578 NYXQ9GZU5 481 aa18.36■□□□□ 0.53
PABPC4-208ENST00000461578 MIS18AQ9NYP9 233 aa18.36■□□□□ 0.53
PABPC4-208ENST00000461578 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
PABPC4-208ENST00000461578 TRPM7Q96QT4 1865 aa18.35■□□□□ 0.53
PABPC4-208ENST00000461578 NUP98P52948 1817 aa18.35■□□□□ 0.53
PABPC4-208ENST00000461578 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
PABPC4-208ENST00000461578 AOC2O75106 756 aa18.34■□□□□ 0.53
PABPC4-208ENST00000461578 GPTP24298 496 aa18.34■□□□□ 0.53
PABPC4-208ENST00000461578 CST9Q5W186 159 aa18.34■□□□□ 0.53
PABPC4-208ENST00000461578 CC2D2BQ6DHV5 1058 aa18.34■□□□□ 0.53
PABPC4-208ENST00000461578 NUDCQ9Y266 331 aa18.34■□□□□ 0.53
PABPC4-208ENST00000461578 MLLT1Q03111 559 aaPredicted RBP18.33■□□□□ 0.52
PABPC4-208ENST00000461578 NIM1KQ8IY84 436 aa18.33■□□□□ 0.52
PABPC4-208ENST00000461578 PPEF1O14829 653 aaPredicted RBP18.32■□□□□ 0.52
PABPC4-208ENST00000461578 TTLL7Q6ZT98 887 aa18.32■□□□□ 0.52
PABPC4-208ENST00000461578 USP50Q70EL3 339 aaPredicted RBP18.32■□□□□ 0.52
PABPC4-208ENST00000461578 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
PABPC4-208ENST00000461578 TLL2Q9Y6L7 1015 aa18.32■□□□□ 0.52
PABPC4-208ENST00000461578 MAP3K15Q6ZN16 1313 aa18.31■□□□□ 0.52
PABPC4-208ENST00000461578 UBN2Q6ZU65 1347 aa18.31■□□□□ 0.52
PABPC4-208ENST00000461578 PPIP5K2O43314 1243 aa18.31■□□□□ 0.52
PABPC4-208ENST00000461578 TAF7Q15545 349 aaPredicted RBP18.31■□□□□ 0.52
PABPC4-208ENST00000461578 KIF6Q6ZMV9 814 aa18.31■□□□□ 0.52
PABPC4-208ENST00000461578 RBM17Q96I25 401 aaKnown RBP18.31■□□□□ 0.52
PABPC4-208ENST00000461578 CFAP44Q96MT7 982 aa18.31■□□□□ 0.52
PABPC4-208ENST00000461578 ZBTB3Q9H5J0 574 aa18.31■□□□□ 0.52
PABPC4-208ENST00000461578 ERVV-1B6SEH8 477 aa18.3■□□□□ 0.52
PABPC4-208ENST00000461578 MYL6BP14649 208 aa18.3■□□□□ 0.52
PABPC4-208ENST00000461578 HOXA10P31260 410 aaPredicted RBP18.3■□□□□ 0.52
PABPC4-208ENST00000461578 AOC3Q16853 763 aa18.3■□□□□ 0.52
PABPC4-208ENST00000461578 SUSD4Q5VX71 490 aa18.3■□□□□ 0.52
PABPC4-208ENST00000461578 CELF2O95319 508 aaKnown RBP18.29■□□□□ 0.52
PABPC4-208ENST00000461578 C3orf67Q6ZVT6 689 aa18.29■□□□□ 0.52
PABPC4-208ENST00000461578 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
PABPC4-208ENST00000461578 RIC1Q4ADV7 1423 aa18.29■□□□□ 0.52
PABPC4-208ENST00000461578 HTATSF1O43719 755 aaKnown RBP18.28■□□□□ 0.52
PABPC4-208ENST00000461578 GRIPAP1Q4V328 841 aa18.28■□□□□ 0.52
PABPC4-208ENST00000461578 ZNF408Q9H9D4 720 aa18.28■□□□□ 0.52
PABPC4-208ENST00000461578 ADARB2Q9NS39 739 aaKnown RBP18.28■□□□□ 0.52
PABPC4-208ENST00000461578 GPRC5DQ9NZD1 345 aa18.28■□□□□ 0.52
PABPC4-208ENST00000461578 MAP2K2P36507 400 aa18.27■□□□□ 0.52
PABPC4-208ENST00000461578 GLIS2Q9BZE0 524 aaPredicted RBP18.27■□□□□ 0.52
PABPC4-208ENST00000461578 IBTKQ9P2D0 1353 aaPredicted RBP18.27■□□□□ 0.51
PABPC4-208ENST00000461578 NTSR2O95665 410 aa18.26■□□□□ 0.51
PABPC4-208ENST00000461578 RGS19P49795 217 aa18.26■□□□□ 0.51
PABPC4-208ENST00000461578 CXCL9Q07325 125 aa18.26■□□□□ 0.51
PABPC4-208ENST00000461578 SAPCD2Q86UD0 394 aa18.26■□□□□ 0.51
PABPC4-208ENST00000461578 MCOLN1Q9GZU1 580 aa18.26■□□□□ 0.51
PABPC4-208ENST00000461578 TMX4Q9H1E5 349 aaPredicted RBP18.26■□□□□ 0.51
PABPC4-208ENST00000461578 KDM3BQ7LBC6 1761 aa18.26■□□□□ 0.51
PABPC4-208ENST00000461578 CASP8AP2Q9UKL3 1982 aa18.26■□□□□ 0.51
PABPC4-208ENST00000461578 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
PABPC4-208ENST00000461578 GMPSP49915 693 aaPredicted RBP18.25■□□□□ 0.51
PABPC4-208ENST00000461578 ZNF34Q8IZ26 560 aa18.25■□□□□ 0.51
PABPC4-208ENST00000461578 DLG5Q8TDM6 1919 aa18.24■□□□□ 0.51
PABPC4-208ENST00000461578 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
PABPC4-208ENST00000461578 NLRP3Q96P20 1036 aa18.24■□□□□ 0.51
PABPC4-208ENST00000461578 ZNRF3Q9ULT6 936 aa18.24■□□□□ 0.51
PABPC4-208ENST00000461578 ATP6V0A2Q9Y487 856 aa18.24■□□□□ 0.51
PABPC4-208ENST00000461578 GIGYF2Q6Y7W6 1299 aaKnown RBP18.23■□□□□ 0.51
PABPC4-208ENST00000461578 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
PABPC4-208ENST00000461578 PNISRQ8TF01 805 aaKnown RBP18.23■□□□□ 0.51
PABPC4-208ENST00000461578 THUMPD2Q9BTF0 503 aaKnown RBP18.23■□□□□ 0.51
PABPC4-208ENST00000461578 ABCC4O15439 1325 aa18.23■□□□□ 0.51
PABPC4-208ENST00000461578 CA12O43570 354 aa18.22■□□□□ 0.51
PABPC4-208ENST00000461578 RAD17O75943 681 aa18.22■□□□□ 0.51
PABPC4-208ENST00000461578 DGKZQ13574 1117 aa18.22■□□□□ 0.51
PABPC4-208ENST00000461578 CIAPIN1Q6FI81 312 aa18.22■□□□□ 0.51
PABPC4-208ENST00000461578 BCL2L13Q9BXK5 485 aa18.22■□□□□ 0.51
PABPC4-208ENST00000461578 BRPF1P55201 1214 aaPredicted RBP18.21■□□□□ 0.51
PABPC4-208ENST00000461578 DPP8Q6V1X1 898 aaPredicted RBP18.21■□□□□ 0.51
PABPC4-208ENST00000461578 SUPT20HQ8NEM7 779 aa18.21■□□□□ 0.51
PABPC4-208ENST00000461578 TRPM4Q8TD43 1214 aa18.21■□□□□ 0.51
PABPC4-208ENST00000461578 SHTN1A0MZ66 631 aa18.2■□□□□ 0.5
PABPC4-208ENST00000461578 NEFMP07197 916 aa18.2■□□□□ 0.5
PABPC4-208ENST00000461578 HIRAP54198 1017 aaPredicted RBP18.2■□□□□ 0.5
PABPC4-208ENST00000461578 PARP10Q53GL7 1025 aa18.2■□□□□ 0.5
PABPC4-208ENST00000461578 ZIC5Q96T25 663 aa18.2■□□□□ 0.5
PABPC4-208ENST00000461578 UTP14AQ9BVJ6 771 aaKnown RBP18.2■□□□□ 0.5
PABPC4-208ENST00000461578 VPS33BQ9H267 617 aa18.2■□□□□ 0.5
PABPC4-208ENST00000461578 MPNDQ8N594 471 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms