RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 RIC1Q4ADV7 1423 aa22.61■■□□□ 1.21
MRPL28-207ENST00000461550 UTP14AQ9BVJ6 771 aaKnown RBP22.61■■□□□ 1.21
MRPL28-207ENST00000461550 CEP350Q5VT06 3117 aa22.61■■□□□ 1.21
MRPL28-207ENST00000461550 KDM2BQ8NHM5 1336 aa22.61■■□□□ 1.21
MRPL28-207ENST00000461550 NLRP10Q86W26 655 aa22.6■■□□□ 1.21
MRPL28-207ENST00000461550 WWC1Q8IX03 1113 aa22.6■■□□□ 1.21
MRPL28-207ENST00000461550 RPGRQ92834 1020 aaKnown RBP22.6■■□□□ 1.21
MRPL28-207ENST00000461550 SALL2Q9Y467 1007 aaPredicted RBP22.6■■□□□ 1.21
MRPL28-207ENST00000461550 TCIRG1Q13488 830 aa22.6■■□□□ 1.21
MRPL28-207ENST00000461550 CCDC93Q567U6 631 aa22.6■■□□□ 1.21
MRPL28-207ENST00000461550 HSP90AB3PQ58FF7 597 aa22.6■■□□□ 1.21
MRPL28-207ENST00000461550 SOGA3Q5TF21 947 aa22.6■■□□□ 1.21
MRPL28-207ENST00000461550 SYNE4Q8N205 404 aa22.6■■□□□ 1.21
MRPL28-207ENST00000461550 HYPKQ9NX55 129 aa22.6■■□□□ 1.21
MRPL28-207ENST00000461550 LAMB2P55268 1798 aa22.6■■□□□ 1.21
MRPL28-207ENST00000461550 LTBP3Q9NS15 1303 aa22.59■■□□□ 1.21
MRPL28-207ENST00000461550 ZC3H4Q9UPT8 1303 aaKnown RBP22.59■■□□□ 1.21
MRPL28-207ENST00000461550 ALDH1B1P30837 517 aa22.59■■□□□ 1.21
MRPL28-207ENST00000461550 SLC51AQ86UW1 340 aa22.59■■□□□ 1.21
MRPL28-207ENST00000461550 TSPYL6Q8N831 410 aa22.59■■□□□ 1.21
MRPL28-207ENST00000461550 PLBD2Q8NHP8 589 aa22.59■■□□□ 1.21
MRPL28-207ENST00000461550 RRAGCQ9HB90 399 aa22.59■■□□□ 1.21
MRPL28-207ENST00000461550 CCDC27Q2M243 656 aa22.58■■□□□ 1.2
MRPL28-207ENST00000461550 ANKRD13DQ6ZTN6 518 aa22.58■■□□□ 1.2
MRPL28-207ENST00000461550 HCLS1P14317 486 aaPredicted RBP22.57■■□□□ 1.2
MRPL28-207ENST00000461550 PHAXQ9H814 394 aaKnown RBP22.57■■□□□ 1.2
MRPL28-207ENST00000461550 ATP5J2-PTCD1G3V325 749 aa22.56■■□□□ 1.2
MRPL28-207ENST00000461550 FAM9BQ8IZU0 186 aa22.56■■□□□ 1.2
MRPL28-207ENST00000461550 TRMT112Q9UI30 125 aaKnown RBP22.56■■□□□ 1.2
MRPL28-207ENST00000461550 GLTPD2A6NH11 291 aa22.55■■□□□ 1.2
MRPL28-207ENST00000461550 TCERG1O14776 1098 aaKnown RBP22.55■■□□□ 1.2
MRPL28-207ENST00000461550 ZNF277Q9NRM2 450 aaPredicted RBP22.55■■□□□ 1.2
MRPL28-207ENST00000461550 TOMM70O94826 608 aa22.54■■□□□ 1.2
MRPL28-207ENST00000461550 HOXA10P31260 410 aaPredicted RBP22.54■■□□□ 1.2
MRPL28-207ENST00000461550 FKBP4Q02790 459 aaKnown RBP eCLIP22.54■■□□□ 1.2
MRPL28-207ENST00000461550 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
MRPL28-207ENST00000461550 NLRP3Q96P20 1036 aa22.54■■□□□ 1.2
MRPL28-207ENST00000461550 SLC10A5Q5PT55 438 aa22.54■■□□□ 1.2
MRPL28-207ENST00000461550 C16orf71Q8IYS4 520 aaPredicted RBP22.54■■□□□ 1.2
MRPL28-207ENST00000461550 DDX60Q8IY21 1712 aaKnown RBP22.53■■□□□ 1.2
MRPL28-207ENST00000461550 SH3TC1Q8TE82 1336 aa22.53■■□□□ 1.2
MRPL28-207ENST00000461550 ISCA1Q9BUE6 129 aa22.53■■□□□ 1.2
MRPL28-207ENST00000461550 RNF123Q5XPI4 1314 aa22.52■■□□□ 1.2
MRPL28-207ENST00000461550 TAF1P21675 1872 aa22.52■■□□□ 1.2
MRPL28-207ENST00000461550 SNED1Q8TER0 1413 aa22.52■■□□□ 1.2
MRPL28-207ENST00000461550 GOLGA2Q08379 1002 aa22.52■■□□□ 1.2
MRPL28-207ENST00000461550 CCDC30Q5VVM6 783 aa22.52■■□□□ 1.2
MRPL28-207ENST00000461550 RIC3Q7Z5B4 369 aa22.52■■□□□ 1.2
MRPL28-207ENST00000461550 RTKN2Q8IZC4 609 aa22.52■■□□□ 1.2
MRPL28-207ENST00000461550 CRAMP1Q96RY5 1269 aa22.52■■□□□ 1.2
MRPL28-207ENST00000461550 PPEF1O14829 653 aaPredicted RBP22.51■■□□□ 1.19
MRPL28-207ENST00000461550 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
MRPL28-207ENST00000461550 HSPA6P17066 643 aa22.5■■□□□ 1.19
MRPL28-207ENST00000461550 DIEXFQ68CQ4 756 aaKnown RBP22.5■■□□□ 1.19
MRPL28-207ENST00000461550 FAM89AQ96GI7 184 aa22.5■■□□□ 1.19
MRPL28-207ENST00000461550 ABCC4O15439 1325 aa22.5■■□□□ 1.19
MRPL28-207ENST00000461550 IL16Q14005 1332 aa22.5■■□□□ 1.19
MRPL28-207ENST00000461550 DPY19L2Q6NUT2 758 aa22.49■■□□□ 1.19
MRPL28-207ENST00000461550 FANCIQ9NVI1 1328 aa22.49■■□□□ 1.19
MRPL28-207ENST00000461550 WDR90Q96KV7 1748 aa22.49■■□□□ 1.19
MRPL28-207ENST00000461550 TWISTNBQ3B726 338 aaPredicted RBP22.48■■□□□ 1.19
MRPL28-207ENST00000461550 RBM46Q8TBY0 533 aaKnown RBP22.48■■□□□ 1.19
MRPL28-207ENST00000461550 MYD88Q99836 296 aa22.48■■□□□ 1.19
MRPL28-207ENST00000461550 DDNO94850 711 aaPredicted RBP22.47■■□□□ 1.19
MRPL28-207ENST00000461550 NCBP3Q53F19 620 aaKnown RBP22.47■■□□□ 1.19
MRPL28-207ENST00000461550 POTECB2RU33 542 aa22.47■■□□□ 1.19
MRPL28-207ENST00000461550 VEGFAP15692 232 aaPredicted RBP22.47■■□□□ 1.19
MRPL28-207ENST00000461550 IARSP41252 1262 aaKnown RBP22.47■■□□□ 1.19
MRPL28-207ENST00000461550 COL4A5P29400 1685 aa22.46■■□□□ 1.19
MRPL28-207ENST00000461550 ZNF541Q9H0D2 1346 aa22.46■■□□□ 1.19
MRPL28-207ENST00000461550 CC2D2BQ6DHV5 1058 aa22.46■■□□□ 1.19
MRPL28-207ENST00000461550 PSMD1Q99460 953 aa22.46■■□□□ 1.19
MRPL28-207ENST00000461550 WDR63Q8IWG1 891 aa22.45■■□□□ 1.18
MRPL28-207ENST00000461550 STK31Q9BXU1 1019 aa22.45■■□□□ 1.18
MRPL28-207ENST00000461550 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
MRPL28-207ENST00000461550 TRIM28Q13263 835 aaKnown RBP22.44■■□□□ 1.18
MRPL28-207ENST00000461550 DDX46Q7L014 1031 aaKnown RBP22.44■■□□□ 1.18
MRPL28-207ENST00000461550 G2E3Q7L622 706 aa22.44■■□□□ 1.18
MRPL28-207ENST00000461550 CHMP4AQ9BY43 222 aa22.44■■□□□ 1.18
MRPL28-207ENST00000461550 MAP3K2Q9Y2U5 619 aa22.44■■□□□ 1.18
MRPL28-207ENST00000461550 COL4A1P02462 1669 aa22.44■■□□□ 1.18
MRPL28-207ENST00000461550 DDX58O95786 925 aaKnown RBP22.43■■□□□ 1.18
MRPL28-207ENST00000461550 JARID2Q92833 1246 aaPredicted RBP22.43■■□□□ 1.18
MRPL28-207ENST00000461550 ATP6V0A2Q9Y487 856 aa22.43■■□□□ 1.18
MRPL28-207ENST00000461550 IRS4O14654 1257 aaPredicted RBP22.42■■□□□ 1.18
MRPL28-207ENST00000461550 EXOSC9Q06265 439 aaKnown RBP22.42■■□□□ 1.18
MRPL28-207ENST00000461550 METTL22Q9BUU2 404 aaPredicted RBP22.42■■□□□ 1.18
MRPL28-207ENST00000461550 PI4KAP2A4QPH2 592 aa22.41■■□□□ 1.18
MRPL28-207ENST00000461550 SLC4A2P04920 1241 aa22.41■■□□□ 1.18
MRPL28-207ENST00000461550 GRAPQ13588 217 aa22.41■■□□□ 1.18
MRPL28-207ENST00000461550 PI4KAP1Q8N8J0 262 aa22.41■■□□□ 1.18
MRPL28-207ENST00000461550 GRAPLQ8TC17 118 aaPredicted RBP22.41■■□□□ 1.18
MRPL28-207ENST00000461550 FSTL1Q12841 308 aa22.41■■□□□ 1.18
MRPL28-207ENST00000461550 ZBTB38Q8NAP3 1195 aaPredicted RBP22.41■■□□□ 1.18
MRPL28-207ENST00000461550 TMX4Q9H1E5 349 aaPredicted RBP22.41■■□□□ 1.18
MRPL28-207ENST00000461550 BBOX1O75936 387 aa22.4■■□□□ 1.18
MRPL28-207ENST00000461550 KSR2Q6VAB6 950 aa22.4■■□□□ 1.18
MRPL28-207ENST00000461550 LARGE2Q8N3Y3 721 aa22.4■■□□□ 1.18
MRPL28-207ENST00000461550 CCDC191Q8NCU4 936 aa22.4■■□□□ 1.18
MRPL28-207ENST00000461550 SMC1BQ8NDV3 1235 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms