RNA–Protein interactions for RNA: ENST00000461533.1

ITGA9-204, Transcript of integrin subunit alpha 9, humanhuman

TSL 3

Gene ITGA9, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-204ENST00000461533 WDR90Q96KV7 1748 aa10.33□□□□□ -0.76
ITGA9-204ENST00000461533 APAF1O14727 1248 aa10.33□□□□□ -0.76
ITGA9-204ENST00000461533 FKBP4Q02790 459 aaKnown RBP eCLIP10.33□□□□□ -0.76
ITGA9-204ENST00000461533 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
ITGA9-204ENST00000461533 COPS6Q7L5N1 327 aa10.33□□□□□ -0.76
ITGA9-204ENST00000461533 CRAMP1Q96RY5 1269 aa10.33□□□□□ -0.76
ITGA9-204ENST00000461533 IFT57Q9NWB7 429 aa10.33□□□□□ -0.76
ITGA9-204ENST00000461533 ANKRD36CQ5JPF3 1778 aa10.32□□□□□ -0.76
ITGA9-204ENST00000461533 ANXA1P04083 346 aa10.32□□□□□ -0.76
ITGA9-204ENST00000461533 GNAI1P63096 354 aa10.32□□□□□ -0.76
ITGA9-204ENST00000461533 KRT24Q2M2I5 525 aa10.32□□□□□ -0.76
ITGA9-204ENST00000461533 HDGFL1Q5TGJ6 251 aa10.32□□□□□ -0.76
ITGA9-204ENST00000461533 SMC1BQ8NDV3 1235 aa10.32□□□□□ -0.76
ITGA9-204ENST00000461533 XAGE3Q8WTP9 111 aa10.32□□□□□ -0.76
ITGA9-204ENST00000461533 PSMD1Q99460 953 aa10.32□□□□□ -0.76
ITGA9-204ENST00000461533 UTP14AQ9BVJ6 771 aaKnown RBP10.32□□□□□ -0.76
ITGA9-204ENST00000461533 DBF4Q9UBU7 674 aaPredicted RBP10.32□□□□□ -0.76
ITGA9-204ENST00000461533 LAS1LQ9Y4W2 734 aaKnown RBP10.32□□□□□ -0.76
ITGA9-204ENST00000461533 POTECB2RU33 542 aa10.31□□□□□ -0.76
ITGA9-204ENST00000461533 TCIRG1Q13488 830 aa10.31□□□□□ -0.76
ITGA9-204ENST00000461533 DUSP27Q5VZP5 1158 aa10.31□□□□□ -0.76
ITGA9-204ENST00000461533 NLRP10Q86W26 655 aa10.31□□□□□ -0.76
ITGA9-204ENST00000461533 PLBD2Q8NHP8 589 aa10.31□□□□□ -0.76
ITGA9-204ENST00000461533 RPGRQ92834 1020 aaKnown RBP10.31□□□□□ -0.76
ITGA9-204ENST00000461533 RBM17Q96I25 401 aaKnown RBP10.31□□□□□ -0.76
ITGA9-204ENST00000461533 NLRP3Q96P20 1036 aa10.31□□□□□ -0.76
ITGA9-204ENST00000461533 CHMP4AQ9BY43 222 aa10.31□□□□□ -0.76
ITGA9-204ENST00000461533 MBIPQ9NS73 344 aa10.31□□□□□ -0.76
ITGA9-204ENST00000461533 HYPKQ9NX55 129 aa10.31□□□□□ -0.76
ITGA9-204ENST00000461533 CHPF2Q9P2E5 772 aa10.31□□□□□ -0.76
ITGA9-204ENST00000461533 AIMP1Q12904 312 aaKnown RBP10.3□□□□□ -0.76
ITGA9-204ENST00000461533 NCBP3Q53F19 620 aaKnown RBP10.3□□□□□ -0.76
ITGA9-204ENST00000461533 DNAJC5GQ8N7S2 189 aa10.3□□□□□ -0.76
ITGA9-204ENST00000461533 NECTIN2Q92692 538 aa10.3□□□□□ -0.76
ITGA9-204ENST00000461533 L3MBTL3Q96JM7 780 aaPredicted RBP10.3□□□□□ -0.76
ITGA9-204ENST00000461533 ZNF316A6NFI3 1004 aaPredicted RBP10.29□□□□□ -0.76
ITGA9-204ENST00000461533 IARSP41252 1262 aaKnown RBP10.29□□□□□ -0.76
ITGA9-204ENST00000461533 TRIM28Q13263 835 aaKnown RBP10.29□□□□□ -0.76
ITGA9-204ENST00000461533 CCDC27Q2M243 656 aa10.29□□□□□ -0.76
ITGA9-204ENST00000461533 OLFM4Q6UX06 510 aa10.29□□□□□ -0.76
ITGA9-204ENST00000461533 ANKRD13DQ6ZTN6 518 aa10.29□□□□□ -0.76
ITGA9-204ENST00000461533 C3orf67Q6ZVT6 689 aa10.29□□□□□ -0.76
ITGA9-204ENST00000461533 SYNE4Q8N205 404 aa10.29□□□□□ -0.76
ITGA9-204ENST00000461533 ZNF277Q9NRM2 450 aaPredicted RBP10.29□□□□□ -0.76
ITGA9-204ENST00000461533 SH3TC1Q8TE82 1336 aa10.29□□□□□ -0.76
ITGA9-204ENST00000461533 SCN4AP35499 1836 aa10.28□□□□□ -0.76
ITGA9-204ENST00000461533 IQCA1LA6NCM1 817 aa10.28□□□□□ -0.76
ITGA9-204ENST00000461533 FZD9O00144 591 aa10.28□□□□□ -0.76
ITGA9-204ENST00000461533 PPEF1O14829 653 aaPredicted RBP10.28□□□□□ -0.76
ITGA9-204ENST00000461533 DDNO94850 711 aaPredicted RBP10.28□□□□□ -0.76
ITGA9-204ENST00000461533 ISCA1Q9BUE6 129 aa10.28□□□□□ -0.76
ITGA9-204ENST00000461533 VPS33BQ9H267 617 aa10.28□□□□□ -0.76
ITGA9-204ENST00000461533 TRMT112Q9UI30 125 aaKnown RBP10.28□□□□□ -0.76
ITGA9-204ENST00000461533 BBOX1O75936 387 aa10.27□□□□□ -0.77
ITGA9-204ENST00000461533 CCDC184Q52MB2 194 aa10.27□□□□□ -0.77
ITGA9-204ENST00000461533 JDP2Q8WYK2 163 aa10.27□□□□□ -0.77
ITGA9-204ENST00000461533 TMX4Q9H1E5 349 aaPredicted RBP10.27□□□□□ -0.77
ITGA9-204ENST00000461533 ATP6V0A2Q9Y487 856 aa10.27□□□□□ -0.77
ITGA9-204ENST00000461533 LAMB2P55268 1798 aa10.26□□□□□ -0.77
ITGA9-204ENST00000461533 HCLS1P14317 486 aaPredicted RBP10.26□□□□□ -0.77
ITGA9-204ENST00000461533 TMC4Q7Z404 712 aa10.26□□□□□ -0.77
ITGA9-204ENST00000461533 GPC2Q8N158 579 aa10.26□□□□□ -0.77
ITGA9-204ENST00000461533 ABCC4O15439 1325 aa10.26□□□□□ -0.77
ITGA9-204ENST00000461533 IL16Q14005 1332 aa10.26□□□□□ -0.77
ITGA9-204ENST00000461533 ZNF541Q9H0D2 1346 aa10.26□□□□□ -0.77
ITGA9-204ENST00000461533 ANP32CO43423 234 aa10.25□□□□□ -0.77
ITGA9-204ENST00000461533 GOLGA2Q08379 1002 aa10.25□□□□□ -0.77
ITGA9-204ENST00000461533 SF3B3Q15393 1217 aaKnown RBP10.25□□□□□ -0.77
ITGA9-204ENST00000461533 CHADLQ6NUI6 762 aa10.25□□□□□ -0.77
ITGA9-204ENST00000461533 DDX46Q7L014 1031 aaKnown RBP10.25□□□□□ -0.77
ITGA9-204ENST00000461533 WWC1Q8IX03 1113 aa10.25□□□□□ -0.77
ITGA9-204ENST00000461533 SP8Q8IXZ3 490 aa10.25□□□□□ -0.77
ITGA9-204ENST00000461533 C8orf58Q8NAV2 365 aa10.25□□□□□ -0.77
ITGA9-204ENST00000461533 KLRG1Q96E93 195 aa10.25□□□□□ -0.77
ITGA9-204ENST00000461533 RTFDC1Q9BY42 306 aaPredicted RBP10.25□□□□□ -0.77
ITGA9-204ENST00000461533 TAF1DQ9H5J8 278 aaPredicted RBP10.25□□□□□ -0.77
ITGA9-204ENST00000461533 COL4A5P29400 1685 aa10.25□□□□□ -0.77
ITGA9-204ENST00000461533 HSP90B1P14625 803 aaKnown RBP10.24□□□□□ -0.77
ITGA9-204ENST00000461533 GRAPQ13588 217 aa10.24□□□□□ -0.77
ITGA9-204ENST00000461533 CCDC30Q5VVM6 783 aa10.24□□□□□ -0.77
ITGA9-204ENST00000461533 RIC3Q7Z5B4 369 aa10.24□□□□□ -0.77
ITGA9-204ENST00000461533 LDHDQ86WU2 507 aa10.24□□□□□ -0.77
ITGA9-204ENST00000461533 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
ITGA9-204ENST00000461533 JMYQ8N9B5 988 aa10.24□□□□□ -0.77
ITGA9-204ENST00000461533 SUPT20HQ8NEM7 779 aa10.24□□□□□ -0.77
ITGA9-204ENST00000461533 GRAPLQ8TC17 118 aaPredicted RBP10.24□□□□□ -0.77
ITGA9-204ENST00000461533 MRS2Q9HD23 443 aa10.24□□□□□ -0.77
ITGA9-204ENST00000461533 HACL1Q9UJ83 578 aa10.24□□□□□ -0.77
ITGA9-204ENST00000461533 DDX60Q8IY21 1712 aaKnown RBP10.24□□□□□ -0.77
ITGA9-204ENST00000461533 ATP5J2-PTCD1G3V325 749 aa10.23□□□□□ -0.77
ITGA9-204ENST00000461533 ELL2O00472 640 aaPredicted RBP10.23□□□□□ -0.77
ITGA9-204ENST00000461533 DDX58O95786 925 aaKnown RBP10.23□□□□□ -0.77
ITGA9-204ENST00000461533 EIF6P56537 245 aaKnown RBP10.23□□□□□ -0.77
ITGA9-204ENST00000461533 PNMA8AQ86V59 439 aaPredicted RBP10.23□□□□□ -0.77
ITGA9-204ENST00000461533 CCDC191Q8NCU4 936 aa10.23□□□□□ -0.77
ITGA9-204ENST00000461533 FAM89AQ96GI7 184 aa10.23□□□□□ -0.77
ITGA9-204ENST00000461533 PHAXQ9H814 394 aaKnown RBP10.23□□□□□ -0.77
ITGA9-204ENST00000461533 LRRC37AA6NMS7 1700 aa10.23□□□□□ -0.77
ITGA9-204ENST00000461533 ADAMTSL1Q8N6G6 1762 aa10.22□□□□□ -0.77
ITGA9-204ENST00000461533 TCERG1O14776 1098 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms