RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 NLRP10Q86W26 655 aa30.63■■■□□ 2.49
LMBR1-214ENST00000461469 TAOK3Q9H2K8 898 aa30.63■■■□□ 2.49
LMBR1-214ENST00000461469 DBF4Q9UBU7 674 aaPredicted RBP30.63■■■□□ 2.49
LMBR1-214ENST00000461469 SNED1Q8TER0 1413 aa30.63■■■□□ 2.49
LMBR1-214ENST00000461469 CALD1Q05682 793 aaKnown RBP30.62■■■□□ 2.49
LMBR1-214ENST00000461469 TCIRG1Q13488 830 aa30.62■■■□□ 2.49
LMBR1-214ENST00000461469 ZC3H4Q9UPT8 1303 aaKnown RBP30.62■■■□□ 2.49
LMBR1-214ENST00000461469 PPP1R42Q7Z4L9 355 aa30.61■■■□□ 2.49
LMBR1-214ENST00000461469 WWC1Q8IX03 1113 aa30.61■■■□□ 2.49
LMBR1-214ENST00000461469 TSPYL6Q8N831 410 aa30.61■■■□□ 2.49
LMBR1-214ENST00000461469 TSR2Q969E8 191 aaKnown RBP30.61■■■□□ 2.49
LMBR1-214ENST00000461469 UTP14AQ9BVJ6 771 aaKnown RBP30.61■■■□□ 2.49
LMBR1-214ENST00000461469 RRAGCQ9HB90 399 aa30.61■■■□□ 2.49
LMBR1-214ENST00000461469 CCDC27Q2M243 656 aa30.6■■■□□ 2.49
LMBR1-214ENST00000461469 KDM2BQ8NHM5 1336 aa30.59■■■□□ 2.49
LMBR1-214ENST00000461469 HOXA10P31260 410 aaPredicted RBP30.59■■■□□ 2.49
LMBR1-214ENST00000461469 CCDC93Q567U6 631 aa30.59■■■□□ 2.49
LMBR1-214ENST00000461469 PLBD2Q8NHP8 589 aa30.59■■■□□ 2.49
LMBR1-214ENST00000461469 PHAXQ9H814 394 aaKnown RBP30.59■■■□□ 2.49
LMBR1-214ENST00000461469 GLTPD2A6NH11 291 aa30.58■■■□□ 2.49
LMBR1-214ENST00000461469 SLC10A5Q5PT55 438 aa30.58■■■□□ 2.49
LMBR1-214ENST00000461469 DDX60Q8IY21 1712 aaKnown RBP30.58■■■□□ 2.49
LMBR1-214ENST00000461469 ALDH1B1P30837 517 aa30.57■■■□□ 2.48
LMBR1-214ENST00000461469 HSP90AB3PQ58FF7 597 aa30.57■■■□□ 2.48
LMBR1-214ENST00000461469 SOGA3Q5TF21 947 aa30.57■■■□□ 2.48
LMBR1-214ENST00000461469 ANKRD13DQ6ZTN6 518 aa30.57■■■□□ 2.48
LMBR1-214ENST00000461469 HYPKQ9NX55 129 aa30.57■■■□□ 2.48
LMBR1-214ENST00000461469 TOMM70O94826 608 aa30.56■■■□□ 2.48
LMBR1-214ENST00000461469 TAF1P21675 1872 aa30.56■■■□□ 2.48
LMBR1-214ENST00000461469 RPGRQ92834 1020 aaKnown RBP30.55■■■□□ 2.48
LMBR1-214ENST00000461469 ISCA1Q9BUE6 129 aa30.55■■■□□ 2.48
LMBR1-214ENST00000461469 WDR90Q96KV7 1748 aa30.54■■■□□ 2.48
LMBR1-214ENST00000461469 POTECB2RU33 542 aa30.54■■■□□ 2.48
LMBR1-214ENST00000461469 ATP5J2-PTCD1G3V325 749 aa30.54■■■□□ 2.48
LMBR1-214ENST00000461469 HCLS1P14317 486 aaPredicted RBP30.54■■■□□ 2.48
LMBR1-214ENST00000461469 FKBP4Q02790 459 aaKnown RBP eCLIP30.54■■■□□ 2.48
LMBR1-214ENST00000461469 ZNF277Q9NRM2 450 aaPredicted RBP30.54■■■□□ 2.48
LMBR1-214ENST00000461469 SALL2Q9Y467 1007 aaPredicted RBP30.53■■■□□ 2.48
LMBR1-214ENST00000461469 NLRP3Q96P20 1036 aa30.52■■■□□ 2.48
LMBR1-214ENST00000461469 CRAMP1Q96RY5 1269 aa30.52■■■□□ 2.48
LMBR1-214ENST00000461469 TRMT112Q9UI30 125 aaKnown RBP30.52■■■□□ 2.48
LMBR1-214ENST00000461469 COL4A5P29400 1685 aa30.52■■■□□ 2.48
LMBR1-214ENST00000461469 HSPA6P17066 643 aa30.51■■■□□ 2.47
LMBR1-214ENST00000461469 RNF123Q5XPI4 1314 aa30.5■■■□□ 2.47
LMBR1-214ENST00000461469 COL4A1P02462 1669 aa30.5■■■□□ 2.47
LMBR1-214ENST00000461469 RBM17Q96I25 401 aaKnown RBP30.5■■■□□ 2.47
LMBR1-214ENST00000461469 CEP350Q5VT06 3117 aa30.5■■■□□ 2.47
LMBR1-214ENST00000461469 SH3TC1Q8TE82 1336 aa30.49■■■□□ 2.47
LMBR1-214ENST00000461469 TCERG1O14776 1098 aaKnown RBP30.49■■■□□ 2.47
LMBR1-214ENST00000461469 RTKN2Q8IZC4 609 aa30.49■■■□□ 2.47
LMBR1-214ENST00000461469 ABCC4O15439 1325 aa30.48■■■□□ 2.47
LMBR1-214ENST00000461469 NCBP3Q53F19 620 aaKnown RBP30.48■■■□□ 2.47
LMBR1-214ENST00000461469 RBM46Q8TBY0 533 aaKnown RBP30.48■■■□□ 2.47
LMBR1-214ENST00000461469 IL16Q14005 1332 aa30.47■■■□□ 2.47
LMBR1-214ENST00000461469 PPEF1O14829 653 aaPredicted RBP30.47■■■□□ 2.47
LMBR1-214ENST00000461469 DDNO94850 711 aaPredicted RBP30.47■■■□□ 2.47
LMBR1-214ENST00000461469 FAM9BQ8IZU0 186 aa30.47■■■□□ 2.47
LMBR1-214ENST00000461469 FAM89AQ96GI7 184 aa30.47■■■□□ 2.47
LMBR1-214ENST00000461469 CCDC30Q5VVM6 783 aa30.45■■■□□ 2.47
LMBR1-214ENST00000461469 RIC3Q7Z5B4 369 aa30.45■■■□□ 2.47
LMBR1-214ENST00000461469 SPINK5Q9NQ38 1064 aaPredicted RBP30.45■■■□□ 2.47
LMBR1-214ENST00000461469 ZNF541Q9H0D2 1346 aa30.45■■■□□ 2.46
LMBR1-214ENST00000461469 FANCIQ9NVI1 1328 aa30.45■■■□□ 2.46
LMBR1-214ENST00000461469 VEGFAP15692 232 aaPredicted RBP30.44■■■□□ 2.46
LMBR1-214ENST00000461469 IARSP41252 1262 aaKnown RBP30.44■■■□□ 2.46
LMBR1-214ENST00000461469 GOLGA2Q08379 1002 aa30.44■■■□□ 2.46
LMBR1-214ENST00000461469 RTL5Q5HYW3 569 aaPredicted RBP30.44■■■□□ 2.46
LMBR1-214ENST00000461469 C16orf71Q8IYS4 520 aaPredicted RBP30.44■■■□□ 2.46
LMBR1-214ENST00000461469 PSMD1Q99460 953 aa30.44■■■□□ 2.46
LMBR1-214ENST00000461469 TRIM28Q13263 835 aaKnown RBP30.43■■■□□ 2.46
LMBR1-214ENST00000461469 DPY19L2Q6NUT2 758 aa30.43■■■□□ 2.46
LMBR1-214ENST00000461469 TWISTNBQ3B726 338 aaPredicted RBP30.42■■■□□ 2.46
LMBR1-214ENST00000461469 MYD88Q99836 296 aa30.42■■■□□ 2.46
LMBR1-214ENST00000461469 CC2D2BQ6DHV5 1058 aa30.41■■■□□ 2.46
LMBR1-214ENST00000461469 G2E3Q7L622 706 aa30.41■■■□□ 2.46
LMBR1-214ENST00000461469 ATP6V0A2Q9Y487 856 aa30.4■■■□□ 2.46
LMBR1-214ENST00000461469 WDR63Q8IWG1 891 aa30.39■■■□□ 2.46
LMBR1-214ENST00000461469 JARID2Q92833 1246 aaPredicted RBP30.38■■■□□ 2.45
LMBR1-214ENST00000461469 LRRC37AA6NMS7 1700 aa30.38■■■□□ 2.45
LMBR1-214ENST00000461469 FZD9O00144 591 aa30.37■■■□□ 2.45
LMBR1-214ENST00000461469 METTL22Q9BUU2 404 aaPredicted RBP30.37■■■□□ 2.45
LMBR1-214ENST00000461469 MAP3K2Q9Y2U5 619 aa30.37■■■□□ 2.45
LMBR1-214ENST00000461469 POTEIP0CG38 1075 aa30.36■■■□□ 2.45
LMBR1-214ENST00000461469 POTEJP0CG39 1038 aa30.36■■■□□ 2.45
LMBR1-214ENST00000461469 FSTL1Q12841 308 aa30.36■■■□□ 2.45
LMBR1-214ENST00000461469 GRAPQ13588 217 aa30.36■■■□□ 2.45
LMBR1-214ENST00000461469 GRAPLQ8TC17 118 aaPredicted RBP30.36■■■□□ 2.45
LMBR1-214ENST00000461469 DUOX1Q9NRD9 1551 aa30.36■■■□□ 2.45
LMBR1-214ENST00000461469 IRS4O14654 1257 aaPredicted RBP30.35■■■□□ 2.45
LMBR1-214ENST00000461469 HTRA3P83110 453 aa30.35■■■□□ 2.45
LMBR1-214ENST00000461469 SF3B3Q15393 1217 aaKnown RBP30.35■■■□□ 2.45
LMBR1-214ENST00000461469 DDX46Q7L014 1031 aaKnown RBP30.35■■■□□ 2.45
LMBR1-214ENST00000461469 SCN4AP35499 1836 aa30.35■■■□□ 2.45
LMBR1-214ENST00000461469 PI4KAP2A4QPH2 592 aa30.34■■■□□ 2.45
LMBR1-214ENST00000461469 VAMP4O75379 141 aa30.34■■■□□ 2.45
LMBR1-214ENST00000461469 BBOX1O75936 387 aa30.34■■■□□ 2.45
LMBR1-214ENST00000461469 EXOSC9Q06265 439 aaKnown RBP30.34■■■□□ 2.45
LMBR1-214ENST00000461469 PI4KAP1Q8N8J0 262 aa30.34■■■□□ 2.45
LMBR1-214ENST00000461469 ZBTB38Q8NAP3 1195 aaPredicted RBP30.34■■■□□ 2.45
LMBR1-214ENST00000461469 CELF1Q92879 486 aaKnown RBP30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms