RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 RPGRQ92834 1020 aaKnown RBP19.89■□□□□ 0.77
VARS-219ENST00000461328 TSR2Q969E8 191 aaKnown RBP19.89■□□□□ 0.77
VARS-219ENST00000461328 UTP14AQ9BVJ6 771 aaKnown RBP19.89■□□□□ 0.77
VARS-219ENST00000461328 LTBP3Q9NS15 1303 aa19.89■□□□□ 0.77
VARS-219ENST00000461328 TIAM2Q8IVF5 1701 aa19.88■□□□□ 0.77
VARS-219ENST00000461328 CRY2Q49AN0 593 aa19.88■□□□□ 0.77
VARS-219ENST00000461328 HYPKQ9NX55 129 aa19.88■□□□□ 0.77
VARS-219ENST00000461328 TCIRG1Q13488 830 aa19.87■□□□□ 0.77
VARS-219ENST00000461328 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
VARS-219ENST00000461328 C16orf71Q8IYS4 520 aaPredicted RBP19.87■□□□□ 0.77
VARS-219ENST00000461328 C7orf43Q8WVR3 580 aa19.87■□□□□ 0.77
VARS-219ENST00000461328 ANKRD36CQ5JPF3 1778 aa19.87■□□□□ 0.77
VARS-219ENST00000461328 CCDC88AQ3V6T2 1871 aa19.86■□□□□ 0.77
VARS-219ENST00000461328 IL16Q14005 1332 aa19.86■□□□□ 0.77
VARS-219ENST00000461328 TOMM70O94826 608 aa19.86■□□□□ 0.77
VARS-219ENST00000461328 ANKRD13DQ6ZTN6 518 aa19.86■□□□□ 0.77
VARS-219ENST00000461328 NLRP10Q86W26 655 aa19.86■□□□□ 0.77
VARS-219ENST00000461328 C8orf58Q8NAV2 365 aa19.86■□□□□ 0.77
VARS-219ENST00000461328 PLBD2Q8NHP8 589 aa19.86■□□□□ 0.77
VARS-219ENST00000461328 RNF123Q5XPI4 1314 aa19.85■□□□□ 0.77
VARS-219ENST00000461328 GLTPD2A6NH11 291 aa19.85■□□□□ 0.77
VARS-219ENST00000461328 NLRP3Q96P20 1036 aa19.85■□□□□ 0.77
VARS-219ENST00000461328 RRAGCQ9HB90 399 aa19.85■□□□□ 0.77
VARS-219ENST00000461328 HOXA10P31260 410 aaPredicted RBP19.84■□□□□ 0.77
VARS-219ENST00000461328 FKBP4Q02790 459 aaKnown RBP eCLIP19.84■□□□□ 0.77
VARS-219ENST00000461328 OLFM4Q6UX06 510 aa19.84■□□□□ 0.77
VARS-219ENST00000461328 RTKN2Q8IZC4 609 aa19.84■□□□□ 0.77
VARS-219ENST00000461328 RBM17Q96I25 401 aaKnown RBP19.84■□□□□ 0.77
VARS-219ENST00000461328 CHMP4AQ9BY43 222 aa19.84■□□□□ 0.77
VARS-219ENST00000461328 TRMT112Q9UI30 125 aaKnown RBP19.84■□□□□ 0.77
VARS-219ENST00000461328 CCDC30Q5VVM6 783 aa19.83■□□□□ 0.77
VARS-219ENST00000461328 C3orf67Q6ZVT6 689 aa19.83■□□□□ 0.77
VARS-219ENST00000461328 WDR63Q8IWG1 891 aa19.83■□□□□ 0.77
VARS-219ENST00000461328 FANCIQ9NVI1 1328 aa19.82■□□□□ 0.76
VARS-219ENST00000461328 GOLGA2Q08379 1002 aa19.82■□□□□ 0.76
VARS-219ENST00000461328 SLC10A5Q5PT55 438 aa19.82■□□□□ 0.76
VARS-219ENST00000461328 DPY19L2Q6NUT2 758 aa19.82■□□□□ 0.76
VARS-219ENST00000461328 TSPYL6Q8N831 410 aa19.82■□□□□ 0.76
VARS-219ENST00000461328 CRAMP1Q96RY5 1269 aa19.82■□□□□ 0.76
VARS-219ENST00000461328 SH3TC1Q8TE82 1336 aa19.81■□□□□ 0.76
VARS-219ENST00000461328 DICER1Q9UPY3 1922 aaKnown RBP19.81■□□□□ 0.76
VARS-219ENST00000461328 HSPA6P17066 643 aa19.81■□□□□ 0.76
VARS-219ENST00000461328 ZNF428Q96B54 188 aa19.81■□□□□ 0.76
VARS-219ENST00000461328 ATP5J2-PTCD1G3V325 749 aa19.8■□□□□ 0.76
VARS-219ENST00000461328 PPEF1O14829 653 aaPredicted RBP19.8■□□□□ 0.76
VARS-219ENST00000461328 HCLS1P14317 486 aaPredicted RBP19.8■□□□□ 0.76
VARS-219ENST00000461328 TWISTNBQ3B726 338 aaPredicted RBP19.8■□□□□ 0.76
VARS-219ENST00000461328 CC2D2BQ6DHV5 1058 aa19.8■□□□□ 0.76
VARS-219ENST00000461328 RIC3Q7Z5B4 369 aa19.8■□□□□ 0.76
VARS-219ENST00000461328 RBM46Q8TBY0 533 aaKnown RBP19.8■□□□□ 0.76
VARS-219ENST00000461328 ISCA1Q9BUE6 129 aa19.8■□□□□ 0.76
VARS-219ENST00000461328 STK31Q9BXU1 1019 aa19.8■□□□□ 0.76
VARS-219ENST00000461328 ZNF277Q9NRM2 450 aaPredicted RBP19.8■□□□□ 0.76
VARS-219ENST00000461328 CCER2I3L3R5 266 aa19.79■□□□□ 0.76
VARS-219ENST00000461328 VEGFAP15692 232 aaPredicted RBP19.79■□□□□ 0.76
VARS-219ENST00000461328 SYNE4Q8N205 404 aa19.79■□□□□ 0.76
VARS-219ENST00000461328 PHAXQ9H814 394 aaKnown RBP19.79■□□□□ 0.76
VARS-219ENST00000461328 TCERG1O14776 1098 aaKnown RBP19.78■□□□□ 0.76
VARS-219ENST00000461328 TMX4Q9H1E5 349 aaPredicted RBP19.78■□□□□ 0.76
VARS-219ENST00000461328 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
VARS-219ENST00000461328 DDX58O95786 925 aaKnown RBP19.77■□□□□ 0.76
VARS-219ENST00000461328 IARSP41252 1262 aaKnown RBP19.77■□□□□ 0.76
VARS-219ENST00000461328 PSMD1Q99460 953 aa19.77■□□□□ 0.76
VARS-219ENST00000461328 ABCC4O15439 1325 aa19.76■□□□□ 0.75
VARS-219ENST00000461328 GRIPAP1Q4V328 841 aa19.76■□□□□ 0.75
VARS-219ENST00000461328 DIEXFQ68CQ4 756 aaKnown RBP19.76■□□□□ 0.75
VARS-219ENST00000461328 FAM89AQ96GI7 184 aa19.76■□□□□ 0.75
VARS-219ENST00000461328 SNED1Q8TER0 1413 aa19.76■□□□□ 0.75
VARS-219ENST00000461328 DDNO94850 711 aaPredicted RBP19.75■□□□□ 0.75
VARS-219ENST00000461328 FSTL1Q12841 308 aa19.75■□□□□ 0.75
VARS-219ENST00000461328 DDX46Q7L014 1031 aaKnown RBP19.75■□□□□ 0.75
VARS-219ENST00000461328 LAMB2P55268 1798 aa19.75■□□□□ 0.75
VARS-219ENST00000461328 WDR90Q96KV7 1748 aa19.74■□□□□ 0.75
VARS-219ENST00000461328 EXOSC9Q06265 439 aaKnown RBP19.74■□□□□ 0.75
VARS-219ENST00000461328 TRIM28Q13263 835 aaKnown RBP19.74■□□□□ 0.75
VARS-219ENST00000461328 RTL5Q5HYW3 569 aaPredicted RBP19.74■□□□□ 0.75
VARS-219ENST00000461328 MYD88Q99836 296 aa19.74■□□□□ 0.75
VARS-219ENST00000461328 ATP6V0A2Q9Y487 856 aa19.74■□□□□ 0.75
VARS-219ENST00000461328 SLC51AQ86UW1 340 aa19.73■□□□□ 0.75
VARS-219ENST00000461328 SMC1BQ8NDV3 1235 aa19.73■□□□□ 0.75
VARS-219ENST00000461328 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
VARS-219ENST00000461328 POTECB2RU33 542 aa19.72■□□□□ 0.75
VARS-219ENST00000461328 BBOX1O75936 387 aa19.72■□□□□ 0.75
VARS-219ENST00000461328 APLP1P51693 650 aa19.72■□□□□ 0.75
VARS-219ENST00000461328 JDP2Q8WYK2 163 aa19.72■□□□□ 0.75
VARS-219ENST00000461328 ZNF541Q9H0D2 1346 aa19.72■□□□□ 0.75
VARS-219ENST00000461328 DDX60Q8IY21 1712 aaKnown RBP19.71■□□□□ 0.75
VARS-219ENST00000461328 IRS4O14654 1257 aaPredicted RBP19.71■□□□□ 0.75
VARS-219ENST00000461328 GRAPQ13588 217 aa19.71■□□□□ 0.75
VARS-219ENST00000461328 GRAPLQ8TC17 118 aaPredicted RBP19.71■□□□□ 0.75
VARS-219ENST00000461328 METTL22Q9BUU2 404 aaPredicted RBP19.71■□□□□ 0.75
VARS-219ENST00000461328 MAP3K2Q9Y2U5 619 aa19.71■□□□□ 0.75
VARS-219ENST00000461328 SLC4A2P04920 1241 aa19.7■□□□□ 0.74
VARS-219ENST00000461328 LARGE2Q8N3Y3 721 aa19.7■□□□□ 0.74
VARS-219ENST00000461328 ZBTB38Q8NAP3 1195 aaPredicted RBP19.7■□□□□ 0.74
VARS-219ENST00000461328 CCDC191Q8NCU4 936 aa19.7■□□□□ 0.74
VARS-219ENST00000461328 CWC25Q9NXE8 425 aaPredicted RBP19.7■□□□□ 0.74
VARS-219ENST00000461328 ZNF521Q96K83 1311 aa19.7■□□□□ 0.74
VARS-219ENST00000461328 IQCA1LA6NCM1 817 aa19.69■□□□□ 0.74
VARS-219ENST00000461328 FZD9O00144 591 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms