RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 NOB1Q9ULX3 412 aaKnown RBP18.3■□□□□ 0.52
COL5A3-202ENST00000461214 KIAA1551Q9HCM1 1747 aa18.29■□□□□ 0.52
COL5A3-202ENST00000461214 ANKRD31Q8N7Z5 1873 aa18.29■□□□□ 0.52
COL5A3-202ENST00000461214 CAMTA2O94983 1202 aa18.29■□□□□ 0.52
COL5A3-202ENST00000461214 MS4A1P11836 297 aa18.29■□□□□ 0.52
COL5A3-202ENST00000461214 CLEC4GQ6UXB4 293 aa18.29■□□□□ 0.52
COL5A3-202ENST00000461214 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
COL5A3-202ENST00000461214 DLEC1Q9Y238 1755 aa18.29■□□□□ 0.52
COL5A3-202ENST00000461214 PI4KAP2A4QPH2 592 aa18.28■□□□□ 0.52
COL5A3-202ENST00000461214 ZPR1O75312 459 aa18.28■□□□□ 0.52
COL5A3-202ENST00000461214 TRIM27P14373 513 aa18.28■□□□□ 0.52
COL5A3-202ENST00000461214 RRP1P56182 461 aaKnown RBP18.28■□□□□ 0.52
COL5A3-202ENST00000461214 HSP90AB3PQ58FF7 597 aa18.28■□□□□ 0.52
COL5A3-202ENST00000461214 GIGYF2Q6Y7W6 1299 aaKnown RBP18.28■□□□□ 0.52
COL5A3-202ENST00000461214 RIC3Q7Z5B4 369 aa18.28■□□□□ 0.52
COL5A3-202ENST00000461214 PI4KAP1Q8N8J0 262 aa18.28■□□□□ 0.52
COL5A3-202ENST00000461214 DNAAF4Q8WXU2 420 aa18.28■□□□□ 0.52
COL5A3-202ENST00000461214 ZBTB3Q9H5J0 574 aa18.28■□□□□ 0.52
COL5A3-202ENST00000461214 TBC1D2BQ9UPU7 963 aa18.28■□□□□ 0.52
COL5A3-202ENST00000461214 MAP3K2Q9Y2U5 619 aa18.27■□□□□ 0.52
COL5A3-202ENST00000461214 NEXNQ0ZGT2 675 aa18.26■□□□□ 0.51
COL5A3-202ENST00000461214 METTL22Q9BUU2 404 aaPredicted RBP18.26■□□□□ 0.51
COL5A3-202ENST00000461214 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
COL5A3-202ENST00000461214 USPL1Q5W0Q7 1092 aa18.25■□□□□ 0.51
COL5A3-202ENST00000461214 FTSJ3Q8IY81 847 aaKnown RBP18.25■□□□□ 0.51
COL5A3-202ENST00000461214 GYS1P13807 737 aa18.24■□□□□ 0.51
COL5A3-202ENST00000461214 PDE3AQ14432 1141 aa18.24■□□□□ 0.51
COL5A3-202ENST00000461214 DZIP1LQ8IYY4 767 aaKnown RBP18.24■□□□□ 0.51
COL5A3-202ENST00000461214 SRP68Q9UHB9 627 aaKnown RBP18.24■□□□□ 0.51
COL5A3-202ENST00000461214 CARMIL3Q8ND23 1372 aa18.24■□□□□ 0.51
COL5A3-202ENST00000461214 TNRC6CQ9HCJ0 1690 aaKnown RBP18.24■□□□□ 0.51
COL5A3-202ENST00000461214 CACNA1SQ13698 1873 aa18.24■□□□□ 0.51
COL5A3-202ENST00000461214 F6X3S4 739 aa18.23■□□□□ 0.51
COL5A3-202ENST00000461214 CCT4P50991 539 aaKnown RBP18.23■□□□□ 0.51
COL5A3-202ENST00000461214 TCIRG1Q13488 830 aa18.23■□□□□ 0.51
COL5A3-202ENST00000461214 LINS1Q8NG48 757 aa18.23■□□□□ 0.51
COL5A3-202ENST00000461214 BCL2L12Q9HB09 334 aa18.23■□□□□ 0.51
COL5A3-202ENST00000461214 SPEF2Q9C093 1822 aa18.23■□□□□ 0.51
COL5A3-202ENST00000461214 HLFQ16534 295 aa18.22■□□□□ 0.51
COL5A3-202ENST00000461214 INTS3Q68E01 1043 aaKnown RBP18.22■□□□□ 0.51
COL5A3-202ENST00000461214 NLGN1Q8N2Q7 840 aa18.22■□□□□ 0.51
COL5A3-202ENST00000461214 PIM2Q9P1W9 311 aa18.22■□□□□ 0.51
COL5A3-202ENST00000461214 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
COL5A3-202ENST00000461214 PARP3Q9Y6F1 533 aa18.22■□□□□ 0.51
COL5A3-202ENST00000461214 COL11A2P13942 1736 aaPredicted RBP18.22■□□□□ 0.51
COL5A3-202ENST00000461214 PCNTO95613 3336 aa18.21■□□□□ 0.51
COL5A3-202ENST00000461214 BRCA1P38398 1863 aaKnown RBP18.21■□□□□ 0.51
COL5A3-202ENST00000461214 ALDH1L1O75891 902 aa18.21■□□□□ 0.51
COL5A3-202ENST00000461214 TRIM28Q13263 835 aaKnown RBP18.21■□□□□ 0.51
COL5A3-202ENST00000461214 PARP10Q53GL7 1025 aa18.21■□□□□ 0.51
COL5A3-202ENST00000461214 DALRD3Q5D0E6 543 aaKnown RBP18.21■□□□□ 0.51
COL5A3-202ENST00000461214 SLC4A10Q6U841 1118 aa18.21■□□□□ 0.51
COL5A3-202ENST00000461214 ZNF34Q8IZ26 560 aa18.21■□□□□ 0.51
COL5A3-202ENST00000461214 MYD88Q99836 296 aa18.21■□□□□ 0.51
COL5A3-202ENST00000461214 ISCA1Q9BUE6 129 aa18.21■□□□□ 0.51
COL5A3-202ENST00000461214 SRCIN1Q9C0H9 1055 aa18.21■□□□□ 0.51
COL5A3-202ENST00000461214 RIC1Q4ADV7 1423 aa18.21■□□□□ 0.51
COL5A3-202ENST00000461214 KCNA3P22001 575 aa18.2■□□□□ 0.5
COL5A3-202ENST00000461214 BEND3Q5T5X7 828 aa18.2■□□□□ 0.5
COL5A3-202ENST00000461214 CCDC191Q8NCU4 936 aa18.2■□□□□ 0.5
COL5A3-202ENST00000461214 NEURL1BA8MQ27 555 aa18.19■□□□□ 0.5
COL5A3-202ENST00000461214 PLIN1O60240 522 aa18.19■□□□□ 0.5
COL5A3-202ENST00000461214 CLUAP1Q96AJ1 413 aa18.19■□□□□ 0.5
COL5A3-202ENST00000461214 NIP7Q9Y221 180 aaKnown RBP eCLIP18.19■□□□□ 0.5
COL5A3-202ENST00000461214 UBN2Q6ZU65 1347 aa18.19■□□□□ 0.5
COL5A3-202ENST00000461214 A0A1B0GUL6 1792 aa18.18■□□□□ 0.5
COL5A3-202ENST00000461214 IGKV5-2P06315 115 aa18.18■□□□□ 0.5
COL5A3-202ENST00000461214 RLBP1P12271 317 aa18.18■□□□□ 0.5
COL5A3-202ENST00000461214 FKBP8Q14318 412 aa18.18■□□□□ 0.5
COL5A3-202ENST00000461214 TBC1D9BQ66K14 1250 aa18.18■□□□□ 0.5
COL5A3-202ENST00000461214 CWC25Q9NXE8 425 aaPredicted RBP18.18■□□□□ 0.5
COL5A3-202ENST00000461214 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
COL5A3-202ENST00000461214 ARFGEF1Q9Y6D6 1849 aa18.18■□□□□ 0.5
COL5A3-202ENST00000461214 RASSF7Q02833 373 aa18.17■□□□□ 0.5
COL5A3-202ENST00000461214 MVPQ14764 893 aaKnown RBP18.17■□□□□ 0.5
COL5A3-202ENST00000461214 NLRP10Q86W26 655 aa18.17■□□□□ 0.5
COL5A3-202ENST00000461214 TMEM57Q8N5G2 664 aa18.17■□□□□ 0.5
COL5A3-202ENST00000461214 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
COL5A3-202ENST00000461214 VEGFAP15692 232 aaPredicted RBP18.16■□□□□ 0.5
COL5A3-202ENST00000461214 CHRNA5P30532 468 aa18.16■□□□□ 0.5
COL5A3-202ENST00000461214 GCKRQ14397 625 aa18.16■□□□□ 0.5
COL5A3-202ENST00000461214 NFIXQ14938 502 aa18.16■□□□□ 0.5
COL5A3-202ENST00000461214 CWF19L2Q2TBE0 894 aaKnown RBP18.16■□□□□ 0.5
COL5A3-202ENST00000461214 PPP1R42Q7Z4L9 355 aa18.16■□□□□ 0.5
COL5A3-202ENST00000461214 PANK1Q8TE04 598 aa18.16■□□□□ 0.5
COL5A3-202ENST00000461214 NYXQ9GZU5 481 aa18.16■□□□□ 0.5
COL5A3-202ENST00000461214 MKRN1Q9UHC7 482 aaKnown RBP18.16■□□□□ 0.5
COL5A3-202ENST00000461214 ATP5J2-PTCD1G3V325 749 aa18.15■□□□□ 0.5
COL5A3-202ENST00000461214 GPTP24298 496 aa18.15■□□□□ 0.5
COL5A3-202ENST00000461214 TM4SF1P30408 202 aa18.15■□□□□ 0.5
COL5A3-202ENST00000461214 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
COL5A3-202ENST00000461214 CHMP4BQ9H444 224 aaKnown RBP18.15■□□□□ 0.5
COL5A3-202ENST00000461214 DDX19BQ9UMR2 479 aa18.15■□□□□ 0.5
COL5A3-202ENST00000461214 UTYO14607 1347 aa18.15■□□□□ 0.5
COL5A3-202ENST00000461214 NTSR2O95665 410 aa18.14■□□□□ 0.49
COL5A3-202ENST00000461214 C20orf194Q5TEA3 1177 aa18.14■□□□□ 0.49
COL5A3-202ENST00000461214 CDHR2Q9BYE9 1310 aa18.14■□□□□ 0.49
COL5A3-202ENST00000461214 TAF1P21675 1872 aa18.14■□□□□ 0.49
COL5A3-202ENST00000461214 GRM8O00222 908 aa18.13■□□□□ 0.49
COL5A3-202ENST00000461214 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms