RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ISCA1Q9BUE6 129 aa28.61■■■□□ 2.17
C9orf3-209ENST00000460573 IBTKQ9P2D0 1353 aaPredicted RBP28.61■■■□□ 2.17
C9orf3-209ENST00000460573 NEXNQ0ZGT2 675 aa28.6■■■□□ 2.17
C9orf3-209ENST00000460573 BCL2L13Q9BXK5 485 aa28.6■■■□□ 2.17
C9orf3-209ENST00000460573 UBN2Q6ZU65 1347 aa28.6■■■□□ 2.17
C9orf3-209ENST00000460573 ANKRD36CQ5JPF3 1778 aa28.6■■■□□ 2.17
C9orf3-209ENST00000460573 CNBD1Q8NA66 436 aa28.59■■■□□ 2.17
C9orf3-209ENST00000460573 DNAAF4Q8WXU2 420 aa28.59■■■□□ 2.17
C9orf3-209ENST00000460573 ARFGEF1Q9Y6D6 1849 aa28.58■■■□□ 2.17
C9orf3-209ENST00000460573 CHRNA5P30532 468 aa28.58■■■□□ 2.17
C9orf3-209ENST00000460573 PRR5LQ6MZQ0 368 aa28.58■■■□□ 2.17
C9orf3-209ENST00000460573 NLRP10Q86W26 655 aa28.58■■■□□ 2.17
C9orf3-209ENST00000460573 MYD88Q99836 296 aa28.58■■■□□ 2.17
C9orf3-209ENST00000460573 RNF123Q5XPI4 1314 aa28.58■■■□□ 2.17
C9orf3-209ENST00000460573 ST5P78524 1137 aa28.57■■■□□ 2.16
C9orf3-209ENST00000460573 SUSD4Q5VX71 490 aa28.57■■■□□ 2.16
C9orf3-209ENST00000460573 UTP14AQ9BVJ6 771 aaKnown RBP28.57■■■□□ 2.16
C9orf3-209ENST00000460573 KIF16BQ96L93 1317 aa28.57■■■□□ 2.16
C9orf3-209ENST00000460573 GTF2E1P29083 439 aaPredicted RBP28.56■■■□□ 2.16
C9orf3-209ENST00000460573 CCDC191Q8NCU4 936 aa28.56■■■□□ 2.16
C9orf3-209ENST00000460573 ATP5J2-PTCD1G3V325 749 aa28.55■■■□□ 2.16
C9orf3-209ENST00000460573 FAM177BA6PVY3 158 aa28.54■■■□□ 2.16
C9orf3-209ENST00000460573 NTSR2O95665 410 aa28.54■■■□□ 2.16
C9orf3-209ENST00000460573 ARHGAP45Q92619 1136 aa28.54■■■□□ 2.16
C9orf3-209ENST00000460573 KCNA3P22001 575 aa28.53■■■□□ 2.16
C9orf3-209ENST00000460573 LINS1Q8NG48 757 aa28.53■■■□□ 2.16
C9orf3-209ENST00000460573 BRIP1Q9BX63 1249 aa28.53■■■□□ 2.16
C9orf3-209ENST00000460573 NOB1Q9ULX3 412 aaKnown RBP28.53■■■□□ 2.16
C9orf3-209ENST00000460573 PDZRN3Q9UPQ7 1066 aa28.53■■■□□ 2.16
C9orf3-209ENST00000460573 IPO8O15397 1037 aaKnown RBP28.52■■■□□ 2.16
C9orf3-209ENST00000460573 CWC25Q9NXE8 425 aaPredicted RBP28.52■■■□□ 2.16
C9orf3-209ENST00000460573 TRMT112Q9UI30 125 aaKnown RBP28.52■■■□□ 2.16
C9orf3-209ENST00000460573 F6X3S4 739 aa28.51■■■□□ 2.15
C9orf3-209ENST00000460573 BCAR3O75815 825 aa28.51■■■□□ 2.15
C9orf3-209ENST00000460573 PDE6BP35913 854 aa28.51■■■□□ 2.15
C9orf3-209ENST00000460573 API5Q9BZZ5 524 aaKnown RBP28.51■■■□□ 2.15
C9orf3-209ENST00000460573 H0YIN7 160 aa28.5■■■□□ 2.15
C9orf3-209ENST00000460573 IGKV5-2P06315 115 aa28.5■■■□□ 2.15
C9orf3-209ENST00000460573 C2CD5Q86YS7 1000 aa28.5■■■□□ 2.15
C9orf3-209ENST00000460573 SH3TC1Q8TE82 1336 aa28.49■■■□□ 2.15
C9orf3-209ENST00000460573 NEURL1BA8MQ27 555 aa28.49■■■□□ 2.15
C9orf3-209ENST00000460573 BEND3Q5T5X7 828 aa28.49■■■□□ 2.15
C9orf3-209ENST00000460573 NUTM1Q86Y26 1132 aa28.49■■■□□ 2.15
C9orf3-209ENST00000460573 ERFEQ4G0M1 354 aa28.48■■■□□ 2.15
C9orf3-209ENST00000460573 SLC10A5Q5PT55 438 aa28.48■■■□□ 2.15
C9orf3-209ENST00000460573 ZBTB38Q8NAP3 1195 aaPredicted RBP28.48■■■□□ 2.15
C9orf3-209ENST00000460573 RIC1Q4ADV7 1423 aa28.48■■■□□ 2.15
C9orf3-209ENST00000460573 ALDH1L1O75891 902 aa28.47■■■□□ 2.15
C9orf3-209ENST00000460573 HSP90B1P14625 803 aaKnown RBP28.47■■■□□ 2.15
C9orf3-209ENST00000460573 CWF19L2Q2TBE0 894 aaKnown RBP28.47■■■□□ 2.15
C9orf3-209ENST00000460573 C9orf131Q5VYM1 1079 aa28.47■■■□□ 2.15
C9orf3-209ENST00000460573 SLC4A10Q6U841 1118 aa28.47■■■□□ 2.15
C9orf3-209ENST00000460573 RCAN3Q9UKA8 241 aa28.47■■■□□ 2.15
C9orf3-209ENST00000460573 PCCAP05165 728 aaPredicted RBP28.46■■■□□ 2.15
C9orf3-209ENST00000460573 CCDC24Q8N4L8 307 aa28.46■■■□□ 2.15
C9orf3-209ENST00000460573 TTLL6Q8N841 843 aa28.46■■■□□ 2.15
C9orf3-209ENST00000460573 SRCIN1Q9C0H9 1055 aa28.46■■■□□ 2.15
C9orf3-209ENST00000460573 DLEC1Q9Y238 1755 aa28.45■■■□□ 2.15
C9orf3-209ENST00000460573 KLRG2A4D1S0 409 aaPredicted RBP28.45■■■□□ 2.14
C9orf3-209ENST00000460573 FRAT1Q92837 279 aaPredicted RBP28.45■■■□□ 2.14
C9orf3-209ENST00000460573 ZNF622Q969S3 477 aaKnown RBP eCLIP28.45■■■□□ 2.14
C9orf3-209ENST00000460573 RNF181Q9P0P0 153 aa28.45■■■□□ 2.14
C9orf3-209ENST00000460573 GCKRQ14397 625 aa28.44■■■□□ 2.14
C9orf3-209ENST00000460573 ZKSCAN2Q63HK3 967 aa28.44■■■□□ 2.14
C9orf3-209ENST00000460573 ATF7IPQ6VMQ6 1270 aa28.43■■■□□ 2.14
C9orf3-209ENST00000460573 FAM89AQ96GI7 184 aa28.43■■■□□ 2.14
C9orf3-209ENST00000460573 ABCC12Q96J65 1359 aa28.42■■■□□ 2.14
C9orf3-209ENST00000460573 NLRP3Q96P20 1036 aa28.42■■■□□ 2.14
C9orf3-209ENST00000460573 ANKRD31Q8N7Z5 1873 aa28.41■■■□□ 2.14
C9orf3-209ENST00000460573 CCT4P50991 539 aaKnown RBP28.41■■■□□ 2.14
C9orf3-209ENST00000460573 CDHR2Q9BYE9 1310 aa28.41■■■□□ 2.14
C9orf3-209ENST00000460573 H7C1W4 665 aa28.4■■■□□ 2.14
C9orf3-209ENST00000460573 IRS4O14654 1257 aaPredicted RBP28.39■■■□□ 2.14
C9orf3-209ENST00000460573 TRIM27P14373 513 aa28.39■■■□□ 2.14
C9orf3-209ENST00000460573 SRGNP10124 158 aa28.38■■■□□ 2.13
C9orf3-209ENST00000460573 HCLS1P14317 486 aaPredicted RBP28.38■■■□□ 2.13
C9orf3-209ENST00000460573 CRY2Q49AN0 593 aa28.38■■■□□ 2.13
C9orf3-209ENST00000460573 C16orf71Q8IYS4 520 aaPredicted RBP28.38■■■□□ 2.13
C9orf3-209ENST00000460573 SYNE4Q8N205 404 aa28.38■■■□□ 2.13
C9orf3-209ENST00000460573 MASTLQ96GX5 879 aa28.38■■■□□ 2.13
C9orf3-209ENST00000460573 NPR1P16066 1061 aa28.37■■■□□ 2.13
C9orf3-209ENST00000460573 RTL5Q5HYW3 569 aaPredicted RBP28.37■■■□□ 2.13
C9orf3-209ENST00000460573 STYK1Q6J9G0 422 aa28.37■■■□□ 2.13
C9orf3-209ENST00000460573 ZNF219Q9P2Y4 722 aaPredicted RBP28.37■■■□□ 2.13
C9orf3-209ENST00000460573 ABCC4O15439 1325 aa28.37■■■□□ 2.13
C9orf3-209ENST00000460573 CACNA1SQ13698 1873 aa28.36■■■□□ 2.13
C9orf3-209ENST00000460573 RASSF7Q02833 373 aa28.36■■■□□ 2.13
C9orf3-209ENST00000460573 C9orf78Q9NZ63 289 aaPredicted RBP28.36■■■□□ 2.13
C9orf3-209ENST00000460573 KDM2BQ8NHM5 1336 aa28.36■■■□□ 2.13
C9orf3-209ENST00000460573 SBF1O95248 1867 aa28.36■■■□□ 2.13
C9orf3-209ENST00000460573 GRM8O00222 908 aa28.35■■■□□ 2.13
C9orf3-209ENST00000460573 PDE8AO60658 829 aa28.35■■■□□ 2.13
C9orf3-209ENST00000460573 MS4A1P11836 297 aa28.35■■■□□ 2.13
C9orf3-209ENST00000460573 INTS3Q68E01 1043 aaKnown RBP28.35■■■□□ 2.13
C9orf3-209ENST00000460573 UBE3BQ7Z3V4 1068 aa28.35■■■□□ 2.13
C9orf3-209ENST00000460573 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.34■■■□□ 2.13
C9orf3-209ENST00000460573 CNKSR1Q969H4 720 aa28.34■■■□□ 2.13
C9orf3-209ENST00000460573 TNRC6CQ9HCJ0 1690 aaKnown RBP28.33■■■□□ 2.13
C9orf3-209ENST00000460573 ALDH1B1P30837 517 aa28.33■■■□□ 2.13
C9orf3-209ENST00000460573 CASP7P55210 303 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms