RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 SNX21Q969T3 373 aa20.78■□□□□ 0.92
YIPF3-205ENST00000460547 SRGAP3O43295 1099 aa20.77■□□□□ 0.92
YIPF3-205ENST00000460547 COL23A1Q86Y22 540 aaPredicted RBP20.77■□□□□ 0.91
YIPF3-205ENST00000460547 KCPQ6ZWJ8 1503 aa20.76■□□□□ 0.91
YIPF3-205ENST00000460547 SLC4A9Q96Q91 983 aa20.76■□□□□ 0.91
YIPF3-205ENST00000460547 KIF2CQ99661 725 aa20.76■□□□□ 0.91
YIPF3-205ENST00000460547 ANTXR1Q9H6X2 564 aa20.76■□□□□ 0.91
YIPF3-205ENST00000460547 C9orf78Q9NZ63 289 aaPredicted RBP20.76■□□□□ 0.91
YIPF3-205ENST00000460547 CASZ1Q86V15 1759 aa20.76■□□□□ 0.91
YIPF3-205ENST00000460547 GRM8O00222 908 aa20.75■□□□□ 0.91
YIPF3-205ENST00000460547 KIF1BPQ96EK5 621 aa20.75■□□□□ 0.91
YIPF3-205ENST00000460547 SURF6O75683 361 aaKnown RBP20.74■□□□□ 0.91
YIPF3-205ENST00000460547 PHF14O94880 888 aa20.74■□□□□ 0.91
YIPF3-205ENST00000460547 PTGER2P43116 358 aa20.74■□□□□ 0.91
YIPF3-205ENST00000460547 XAGE3Q8WTP9 111 aa20.74■□□□□ 0.91
YIPF3-205ENST00000460547 GNPATO15228 680 aa20.73■□□□□ 0.91
YIPF3-205ENST00000460547 POLD1P28340 1107 aa20.73■□□□□ 0.91
YIPF3-205ENST00000460547 CWF19L2Q2TBE0 894 aaKnown RBP20.73■□□□□ 0.91
YIPF3-205ENST00000460547 RIC3Q7Z5B4 369 aa20.73■□□□□ 0.91
YIPF3-205ENST00000460547 IGKV5-2P06315 115 aa20.73■□□□□ 0.91
YIPF3-205ENST00000460547 SSFA2P28290 1259 aa20.73■□□□□ 0.91
YIPF3-205ENST00000460547 NEXNQ0ZGT2 675 aa20.73■□□□□ 0.91
YIPF3-205ENST00000460547 HSCBQ8IWL3 235 aa20.73■□□□□ 0.91
YIPF3-205ENST00000460547 RHPN1Q8TCX5 695 aa20.73■□□□□ 0.91
YIPF3-205ENST00000460547 METTL22Q9BUU2 404 aaPredicted RBP20.73■□□□□ 0.91
YIPF3-205ENST00000460547 USP16Q9Y5T5 823 aa20.73■□□□□ 0.91
YIPF3-205ENST00000460547 COL15A1P39059 1388 aa20.72■□□□□ 0.91
YIPF3-205ENST00000460547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.72■□□□□ 0.91
YIPF3-205ENST00000460547 AIMP1Q12904 312 aaKnown RBP20.72■□□□□ 0.91
YIPF3-205ENST00000460547 COPS6Q7L5N1 327 aa20.72■□□□□ 0.91
YIPF3-205ENST00000460547 NEURL1BA8MQ27 555 aa20.71■□□□□ 0.91
YIPF3-205ENST00000460547 MYL6BP14649 208 aa20.71■□□□□ 0.91
YIPF3-205ENST00000460547 NFKBIBQ15653 356 aa20.71■□□□□ 0.91
YIPF3-205ENST00000460547 RC3H1Q5TC82 1133 aaKnown RBP20.71■□□□□ 0.91
YIPF3-205ENST00000460547 RTCBQ9Y3I0 505 aaKnown RBP20.71■□□□□ 0.91
YIPF3-205ENST00000460547 C4BP0C0L5 1744 aa20.71■□□□□ 0.91
YIPF3-205ENST00000460547 USP42Q9H9J4 1324 aaKnown RBP20.71■□□□□ 0.91
YIPF3-205ENST00000460547 ARFGEF2Q9Y6D5 1785 aa20.71■□□□□ 0.91
YIPF3-205ENST00000460547 REC8O95072 547 aa20.7■□□□□ 0.91
YIPF3-205ENST00000460547 ARXQ96QS3 562 aa20.7■□□□□ 0.91
YIPF3-205ENST00000460547 USP26Q9BXU7 913 aa20.7■□□□□ 0.91
YIPF3-205ENST00000460547 TRAPPC3LQ5T215 181 aa20.7■□□□□ 0.9
YIPF3-205ENST00000460547 ANKRD13DQ6ZTN6 518 aa20.7■□□□□ 0.9
YIPF3-205ENST00000460547 SMIM5Q71RC9 77 aa20.7■□□□□ 0.9
YIPF3-205ENST00000460547 SGIP1Q9BQI5 828 aa20.7■□□□□ 0.9
YIPF3-205ENST00000460547 BCL11AQ9H165 835 aa20.7■□□□□ 0.9
YIPF3-205ENST00000460547 ERC2O15083 957 aa20.69■□□□□ 0.9
YIPF3-205ENST00000460547 ERC1Q8IUD2 1116 aa20.69■□□□□ 0.9
YIPF3-205ENST00000460547 SUCLG2Q96I99 432 aa20.69■□□□□ 0.9
YIPF3-205ENST00000460547 TAF1LQ8IZX4 1826 aa20.69■□□□□ 0.9
YIPF3-205ENST00000460547 GCKRQ14397 625 aa20.68■□□□□ 0.9
YIPF3-205ENST00000460547 AMIGO3Q86WK7 504 aa20.68■□□□□ 0.9
YIPF3-205ENST00000460547 KAZALD1Q96I82 304 aa20.68■□□□□ 0.9
YIPF3-205ENST00000460547 IL1RAPL2Q9NP60 686 aa20.68■□□□□ 0.9
YIPF3-205ENST00000460547 CNTNAP4Q9C0A0 1308 aa20.68■□□□□ 0.9
YIPF3-205ENST00000460547 QSER1Q2KHR3 1735 aa20.68■□□□□ 0.9
YIPF3-205ENST00000460547 DNAJC10Q8IXB1 793 aa20.67■□□□□ 0.9
YIPF3-205ENST00000460547 RPS6KA4O75676 772 aa20.67■□□□□ 0.9
YIPF3-205ENST00000460547 CRKLP46109 303 aaKnown RBP20.67■□□□□ 0.9
YIPF3-205ENST00000460547 MSL1Q68DK7 614 aa20.67■□□□□ 0.9
YIPF3-205ENST00000460547 VSIG10Q8N0Z9 540 aa20.67■□□□□ 0.9
YIPF3-205ENST00000460547 PLBD2Q8NHP8 589 aa20.67■□□□□ 0.9
YIPF3-205ENST00000460547 RABEP1Q15276 862 aa20.66■□□□□ 0.9
YIPF3-205ENST00000460547 TSHZ3Q63HK5 1081 aa20.66■□□□□ 0.9
YIPF3-205ENST00000460547 MYD88Q99836 296 aa20.66■□□□□ 0.9
YIPF3-205ENST00000460547 SLKQ9H2G2 1235 aaPredicted RBP20.66■□□□□ 0.9
YIPF3-205ENST00000460547 TTC41PQ6P2S7 1318 aa20.66■□□□□ 0.9
YIPF3-205ENST00000460547 PI4K2BQ8TCG2 481 aa20.65■□□□□ 0.9
YIPF3-205ENST00000460547 BICC1Q9H694 974 aaKnown RBP20.65■□□□□ 0.9
YIPF3-205ENST00000460547 ADRA2BP18089 450 aa20.64■□□□□ 0.9
YIPF3-205ENST00000460547 FHDC1Q9C0D6 1143 aaPredicted RBP20.64■□□□□ 0.9
YIPF3-205ENST00000460547 ZNF831Q5JPB2 1677 aa20.64■□□□□ 0.89
YIPF3-205ENST00000460547 NBPF26B4DH59 902 aa20.64■□□□□ 0.89
YIPF3-205ENST00000460547 EPB41L2O43491 1005 aaKnown RBP20.64■□□□□ 0.89
YIPF3-205ENST00000460547 RFC4P35249 363 aa20.64■□□□□ 0.89
YIPF3-205ENST00000460547 NBPF10Q6P3W6 841 aaKnown RBP20.64■□□□□ 0.89
YIPF3-205ENST00000460547 KLHL34Q8N239 644 aa20.64■□□□□ 0.89
YIPF3-205ENST00000460547 NBPF15Q8N660 670 aa20.64■□□□□ 0.89
YIPF3-205ENST00000460547 ESYT1Q9BSJ8 1104 aa20.64■□□□□ 0.89
YIPF3-205ENST00000460547 TEX13AQ9BXU3 409 aaPredicted RBP20.64■□□□□ 0.89
YIPF3-205ENST00000460547 DCAF8L1A6NGE4 600 aa20.63■□□□□ 0.89
YIPF3-205ENST00000460547 CHMLP26374 656 aa20.63■□□□□ 0.89
YIPF3-205ENST00000460547 OS9Q13438 667 aaPredicted RBP20.63■□□□□ 0.89
YIPF3-205ENST00000460547 NUTM1Q86Y26 1132 aa20.63■□□□□ 0.89
YIPF3-205ENST00000460547 ARHGEF1Q92888 912 aaKnown RBP20.63■□□□□ 0.89
YIPF3-205ENST00000460547 SYT17Q9BSW7 474 aa20.63■□□□□ 0.89
YIPF3-205ENST00000460547 AFDNP55196 1824 aaKnown RBP20.63■□□□□ 0.89
YIPF3-205ENST00000460547 STARD3NLO95772 234 aa20.62■□□□□ 0.89
YIPF3-205ENST00000460547 CYP19A1P11511 503 aaPredicted RBP20.62■□□□□ 0.89
YIPF3-205ENST00000460547 CLASRPQ8N2M8 674 aaKnown RBP20.62■□□□□ 0.89
YIPF3-205ENST00000460547 CCDC87Q9NVE4 849 aa20.62■□□□□ 0.89
YIPF3-205ENST00000460547 CHMP5Q9NZZ3 219 aa20.62■□□□□ 0.89
YIPF3-205ENST00000460547 DDIT3P35638 169 aa20.61■□□□□ 0.89
YIPF3-205ENST00000460547 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
YIPF3-205ENST00000460547 TRIM6-TRIM34B2RNG4 842 aa20.61■□□□□ 0.89
YIPF3-205ENST00000460547 K7ELQ4 463 aaPredicted RBP20.61■□□□□ 0.89
YIPF3-205ENST00000460547 RABL6Q3YEC7 729 aaPredicted RBP20.61■□□□□ 0.89
YIPF3-205ENST00000460547 GLRX3O76003 335 aaKnown RBP20.6■□□□□ 0.89
YIPF3-205ENST00000460547 PIP4K2AP48426 406 aaPredicted RBP20.6■□□□□ 0.89
YIPF3-205ENST00000460547 UBR3Q6ZT12 1888 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms