RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 TIAM2Q8IVF5 1701 aa30.66■■■□□ 2.5
HOXB3-202ENST00000460160 PLBD2Q8NHP8 589 aa30.66■■■□□ 2.5
HOXB3-202ENST00000460160 UTP14AQ9BVJ6 771 aaKnown RBP30.66■■■□□ 2.5
HOXB3-202ENST00000460160 ANKRD13DQ6ZTN6 518 aa30.65■■■□□ 2.5
HOXB3-202ENST00000460160 NLRP10Q86W26 655 aa30.65■■■□□ 2.5
HOXB3-202ENST00000460160 IL16Q14005 1332 aa30.64■■■□□ 2.5
HOXB3-202ENST00000460160 CEP350Q5VT06 3117 aa30.64■■■□□ 2.5
HOXB3-202ENST00000460160 SOGA3Q5TF21 947 aa30.64■■■□□ 2.5
HOXB3-202ENST00000460160 TSPYL6Q8N831 410 aa30.64■■■□□ 2.5
HOXB3-202ENST00000460160 LTBP3Q9NS15 1303 aa30.64■■■□□ 2.49
HOXB3-202ENST00000460160 ZC3H4Q9UPT8 1303 aaKnown RBP30.64■■■□□ 2.49
HOXB3-202ENST00000460160 KIF3CO14782 793 aa30.63■■■□□ 2.49
HOXB3-202ENST00000460160 FAM9BQ8IZU0 186 aa30.63■■■□□ 2.49
HOXB3-202ENST00000460160 C3orf67Q6ZVT6 689 aa30.63■■■□□ 2.49
HOXB3-202ENST00000460160 TAOK3Q9H2K8 898 aa30.63■■■□□ 2.49
HOXB3-202ENST00000460160 RNF123Q5XPI4 1314 aa30.62■■■□□ 2.49
HOXB3-202ENST00000460160 ALDH1B1P30837 517 aa30.62■■■□□ 2.49
HOXB3-202ENST00000460160 NMRK2Q9NPI5 230 aa30.62■■■□□ 2.49
HOXB3-202ENST00000460160 HOXA10P31260 410 aaPredicted RBP30.61■■■□□ 2.49
HOXB3-202ENST00000460160 SLC10A5Q5PT55 438 aa30.61■■■□□ 2.49
HOXB3-202ENST00000460160 OLFM4Q6UX06 510 aa30.61■■■□□ 2.49
HOXB3-202ENST00000460160 SALL2Q9Y467 1007 aaPredicted RBP30.61■■■□□ 2.49
HOXB3-202ENST00000460160 LAMB2P55268 1798 aa30.6■■■□□ 2.49
HOXB3-202ENST00000460160 RPGRQ92834 1020 aaKnown RBP30.6■■■□□ 2.49
HOXB3-202ENST00000460160 PHAXQ9H814 394 aaKnown RBP30.6■■■□□ 2.49
HOXB3-202ENST00000460160 CCDC93Q567U6 631 aa30.59■■■□□ 2.49
HOXB3-202ENST00000460160 CCDC30Q5VVM6 783 aa30.58■■■□□ 2.49
HOXB3-202ENST00000460160 ISCA1Q9BUE6 129 aa30.58■■■□□ 2.49
HOXB3-202ENST00000460160 KDM2BQ8NHM5 1336 aa30.58■■■□□ 2.49
HOXB3-202ENST00000460160 SYNE4Q8N205 404 aa30.57■■■□□ 2.49
HOXB3-202ENST00000460160 TRMT112Q9UI30 125 aaKnown RBP30.57■■■□□ 2.49
HOXB3-202ENST00000460160 NLRP3Q96P20 1036 aa30.57■■■□□ 2.48
HOXB3-202ENST00000460160 CHMP4AQ9BY43 222 aa30.57■■■□□ 2.48
HOXB3-202ENST00000460160 WDR63Q8IWG1 891 aa30.56■■■□□ 2.48
HOXB3-202ENST00000460160 ATP5J2-PTCD1G3V325 749 aa30.55■■■□□ 2.48
HOXB3-202ENST00000460160 GOLGA2Q08379 1002 aa30.55■■■□□ 2.48
HOXB3-202ENST00000460160 ZNF428Q96B54 188 aa30.55■■■□□ 2.48
HOXB3-202ENST00000460160 CRAMP1Q96RY5 1269 aa30.55■■■□□ 2.48
HOXB3-202ENST00000460160 SH3TC1Q8TE82 1336 aa30.55■■■□□ 2.48
HOXB3-202ENST00000460160 FANCIQ9NVI1 1328 aa30.55■■■□□ 2.48
HOXB3-202ENST00000460160 SNED1Q8TER0 1413 aa30.54■■■□□ 2.48
HOXB3-202ENST00000460160 HCLS1P14317 486 aaPredicted RBP30.54■■■□□ 2.48
HOXB3-202ENST00000460160 RBM17Q96I25 401 aaKnown RBP30.54■■■□□ 2.48
HOXB3-202ENST00000460160 DDX60Q8IY21 1712 aaKnown RBP30.54■■■□□ 2.48
HOXB3-202ENST00000460160 TWISTNBQ3B726 338 aaPredicted RBP30.53■■■□□ 2.48
HOXB3-202ENST00000460160 FKBP4Q02790 459 aaKnown RBP eCLIP30.52■■■□□ 2.48
HOXB3-202ENST00000460160 RIC3Q7Z5B4 369 aa30.52■■■□□ 2.48
HOXB3-202ENST00000460160 RTKN2Q8IZC4 609 aa30.52■■■□□ 2.48
HOXB3-202ENST00000460160 GLTPD2A6NH11 291 aa30.52■■■□□ 2.48
HOXB3-202ENST00000460160 TRIM28Q13263 835 aaKnown RBP30.52■■■□□ 2.48
HOXB3-202ENST00000460160 SLC51AQ86UW1 340 aa30.49■■■□□ 2.47
HOXB3-202ENST00000460160 RRAGCQ9HB90 399 aa30.49■■■□□ 2.47
HOXB3-202ENST00000460160 ZNF277Q9NRM2 450 aaPredicted RBP30.49■■■□□ 2.47
HOXB3-202ENST00000460160 CACNA1FO60840 1977 aa30.49■■■□□ 2.47
HOXB3-202ENST00000460160 TAF1P21675 1872 aa30.48■■■□□ 2.47
HOXB3-202ENST00000460160 TCERG1O14776 1098 aaKnown RBP30.48■■■□□ 2.47
HOXB3-202ENST00000460160 PPEF1O14829 653 aaPredicted RBP30.48■■■□□ 2.47
HOXB3-202ENST00000460160 CC2D2BQ6DHV5 1058 aa30.48■■■□□ 2.47
HOXB3-202ENST00000460160 FAM89AQ96GI7 184 aa30.48■■■□□ 2.47
HOXB3-202ENST00000460160 STK31Q9BXU1 1019 aa30.48■■■□□ 2.47
HOXB3-202ENST00000460160 SPINK5Q9NQ38 1064 aaPredicted RBP30.48■■■□□ 2.47
HOXB3-202ENST00000460160 ABCC4O15439 1325 aa30.48■■■□□ 2.47
HOXB3-202ENST00000460160 TOMM70O94826 608 aa30.47■■■□□ 2.47
HOXB3-202ENST00000460160 DDX58O95786 925 aaKnown RBP30.46■■■□□ 2.47
HOXB3-202ENST00000460160 PSMD1Q99460 953 aa30.46■■■□□ 2.47
HOXB3-202ENST00000460160 MYD88Q99836 296 aa30.46■■■□□ 2.47
HOXB3-202ENST00000460160 WDR90Q96KV7 1748 aa30.45■■■□□ 2.46
HOXB3-202ENST00000460160 DPY19L2Q6NUT2 758 aa30.44■■■□□ 2.46
HOXB3-202ENST00000460160 METTL22Q9BUU2 404 aaPredicted RBP30.44■■■□□ 2.46
HOXB3-202ENST00000460160 EXOSC9Q06265 439 aaKnown RBP30.43■■■□□ 2.46
HOXB3-202ENST00000460160 RTL5Q5HYW3 569 aaPredicted RBP30.43■■■□□ 2.46
HOXB3-202ENST00000460160 SLC4A2P04920 1241 aa30.42■■■□□ 2.46
HOXB3-202ENST00000460160 G2E3Q7L622 706 aa30.42■■■□□ 2.46
HOXB3-202ENST00000460160 MAP3K2Q9Y2U5 619 aa30.42■■■□□ 2.46
HOXB3-202ENST00000460160 ZNF521Q96K83 1311 aa30.42■■■□□ 2.46
HOXB3-202ENST00000460160 VAMP4O75379 141 aa30.42■■■□□ 2.46
HOXB3-202ENST00000460160 IARSP41252 1262 aaKnown RBP30.42■■■□□ 2.46
HOXB3-202ENST00000460160 GRIPAP1Q4V328 841 aa30.42■■■□□ 2.46
HOXB3-202ENST00000460160 KSR2Q6VAB6 950 aa30.42■■■□□ 2.46
HOXB3-202ENST00000460160 DDX46Q7L014 1031 aaKnown RBP30.42■■■□□ 2.46
HOXB3-202ENST00000460160 C16orf71Q8IYS4 520 aaPredicted RBP30.42■■■□□ 2.46
HOXB3-202ENST00000460160 CCDC191Q8NCU4 936 aa30.42■■■□□ 2.46
HOXB3-202ENST00000460160 ATP6V0A2Q9Y487 856 aa30.42■■■□□ 2.46
HOXB3-202ENST00000460160 PI4KAP2A4QPH2 592 aa30.41■■■□□ 2.46
HOXB3-202ENST00000460160 PI4KAP1Q8N8J0 262 aa30.41■■■□□ 2.46
HOXB3-202ENST00000460160 ZBTB38Q8NAP3 1195 aaPredicted RBP30.41■■■□□ 2.46
HOXB3-202ENST00000460160 RBM46Q8TBY0 533 aaKnown RBP30.41■■■□□ 2.46
HOXB3-202ENST00000460160 IRS4O14654 1257 aaPredicted RBP30.4■■■□□ 2.46
HOXB3-202ENST00000460160 VEGFAP15692 232 aaPredicted RBP30.4■■■□□ 2.46
HOXB3-202ENST00000460160 MYH16Q9H6N6 1097 aa30.4■■■□□ 2.46
HOXB3-202ENST00000460160 POTECB2RU33 542 aa30.39■■■□□ 2.46
HOXB3-202ENST00000460160 BBOX1O75936 387 aa30.39■■■□□ 2.46
HOXB3-202ENST00000460160 HSPA6P17066 643 aa30.39■■■□□ 2.46
HOXB3-202ENST00000460160 GRAPQ13588 217 aa30.39■■■□□ 2.46
HOXB3-202ENST00000460160 SF3B3Q15393 1217 aaKnown RBP30.39■■■□□ 2.46
HOXB3-202ENST00000460160 GRAPLQ8TC17 118 aaPredicted RBP30.39■■■□□ 2.46
HOXB3-202ENST00000460160 CWC25Q9NXE8 425 aaPredicted RBP30.38■■■□□ 2.45
HOXB3-202ENST00000460160 COL4A5P29400 1685 aa30.38■■■□□ 2.45
HOXB3-202ENST00000460160 DDNO94850 711 aaPredicted RBP30.37■■■□□ 2.45
HOXB3-202ENST00000460160 IGKV5-2P06315 115 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms