RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 SNRPA1P09661 255 aaKnown RBP10.55□□□□□ -0.72
HPS4-207ENST00000459918 PRKAR2BP31323 418 aa10.55□□□□□ -0.72
HPS4-207ENST00000459918 SYNE4Q8N205 404 aa10.55□□□□□ -0.72
HPS4-207ENST00000459918 CFAP53Q96M91 514 aa10.55□□□□□ -0.72
HPS4-207ENST00000459918 TMX4Q9H1E5 349 aaPredicted RBP10.55□□□□□ -0.72
HPS4-207ENST00000459918 USP16Q9Y5T5 823 aa10.55□□□□□ -0.72
HPS4-207ENST00000459918 KIF7Q2M1P5 1343 aa10.55□□□□□ -0.72
HPS4-207ENST00000459918 COL3A1P02461 1466 aaPredicted RBP10.55□□□□□ -0.72
HPS4-207ENST00000459918 PRAMEF22A3QJZ6 481 aa10.54□□□□□ -0.72
HPS4-207ENST00000459918 TCERG1O14776 1098 aaKnown RBP10.54□□□□□ -0.72
HPS4-207ENST00000459918 MLLT1Q03111 559 aaPredicted RBP10.54□□□□□ -0.72
HPS4-207ENST00000459918 LARGE2Q8N3Y3 721 aa10.54□□□□□ -0.72
HPS4-207ENST00000459918 NGEFQ8N5V2 710 aa10.54□□□□□ -0.72
HPS4-207ENST00000459918 CAPNS2Q96L46 248 aa10.54□□□□□ -0.72
HPS4-207ENST00000459918 DDX21Q9NR30 783 aaKnown RBP eCLIP10.54□□□□□ -0.72
HPS4-207ENST00000459918 THSD7BQ9C0I4 1608 aa10.54□□□□□ -0.72
HPS4-207ENST00000459918 NUP98P52948 1817 aa10.54□□□□□ -0.72
HPS4-207ENST00000459918 FZD9O00144 591 aa10.53□□□□□ -0.72
HPS4-207ENST00000459918 CYP4F22Q6NT55 531 aa10.53□□□□□ -0.72
HPS4-207ENST00000459918 KIF6Q6ZMV9 814 aa10.53□□□□□ -0.72
HPS4-207ENST00000459918 MCM10Q7L590 875 aa10.53□□□□□ -0.72
HPS4-207ENST00000459918 CCER1Q8TC90 406 aaPredicted RBP10.53□□□□□ -0.72
HPS4-207ENST00000459918 C7orf43Q8WVR3 580 aa10.53□□□□□ -0.72
HPS4-207ENST00000459918 NYXQ9GZU5 481 aa10.53□□□□□ -0.72
HPS4-207ENST00000459918 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.72
HPS4-207ENST00000459918 SLC34A2O95436 690 aa10.52□□□□□ -0.73
HPS4-207ENST00000459918 NUTM1Q86Y26 1132 aa10.52□□□□□ -0.73
HPS4-207ENST00000459918 NIM1KQ8IY84 436 aa10.52□□□□□ -0.73
HPS4-207ENST00000459918 GPR101Q96P66 508 aaPredicted RBP10.52□□□□□ -0.73
HPS4-207ENST00000459918 PSMD1Q99460 953 aa10.52□□□□□ -0.73
HPS4-207ENST00000459918 ZNF408Q9H9D4 720 aa10.52□□□□□ -0.73
HPS4-207ENST00000459918 TSKSQ9UJT2 592 aa10.52□□□□□ -0.73
HPS4-207ENST00000459918 NUDCQ9Y266 331 aa10.52□□□□□ -0.73
HPS4-207ENST00000459918 ZBTB12Q9Y330 459 aaPredicted RBP10.52□□□□□ -0.73
HPS4-207ENST00000459918 LTBP1Q14766 1721 aa10.52□□□□□ -0.73
HPS4-207ENST00000459918 NEFMP07197 916 aa10.51□□□□□ -0.73
HPS4-207ENST00000459918 U2AF1L5P0DN76 240 aaPredicted RBP10.51□□□□□ -0.73
HPS4-207ENST00000459918 U2AF1Q01081 240 aaKnown RBP eCLIP10.51□□□□□ -0.736e-11■■■■□ 21.2
HPS4-207ENST00000459918 CC2D2BQ6DHV5 1058 aa10.51□□□□□ -0.73
HPS4-207ENST00000459918 PHACTR3Q96KR7 559 aa10.51□□□□□ -0.73
HPS4-207ENST00000459918 ABCC12Q96J65 1359 aa10.51□□□□□ -0.73
HPS4-207ENST00000459918 TRAF5O00463 557 aa10.5□□□□□ -0.73
HPS4-207ENST00000459918 PPEF1O14829 653 aaPredicted RBP10.5□□□□□ -0.73
HPS4-207ENST00000459918 PPIP5K2O43314 1243 aa10.5□□□□□ -0.73
HPS4-207ENST00000459918 GPTP24298 496 aa10.5□□□□□ -0.73
HPS4-207ENST00000459918 EPS15P42566 896 aa10.5□□□□□ -0.73
HPS4-207ENST00000459918 FMR1Q06787 632 aaKnown RBP eCLIP10.5□□□□□ -0.73
HPS4-207ENST00000459918 HLFQ16534 295 aa10.5□□□□□ -0.73
HPS4-207ENST00000459918 USP50Q70EL3 339 aaPredicted RBP10.5□□□□□ -0.73
HPS4-207ENST00000459918 KLRG2A4D1S0 409 aaPredicted RBP10.49□□□□□ -0.73
HPS4-207ENST00000459918 NBPF26B4DH59 902 aa10.49□□□□□ -0.73
HPS4-207ENST00000459918 AOC2O75106 756 aa10.49□□□□□ -0.73
HPS4-207ENST00000459918 MYL6BP14649 208 aa10.49□□□□□ -0.73
HPS4-207ENST00000459918 SCNN1DP51172 638 aa10.49□□□□□ -0.73
HPS4-207ENST00000459918 DCTN1Q14203 1278 aa10.49□□□□□ -0.73
HPS4-207ENST00000459918 GRIPAP1Q4V328 841 aa10.49□□□□□ -0.73
HPS4-207ENST00000459918 NBPF10Q6P3W6 841 aaKnown RBP10.49□□□□□ -0.73
HPS4-207ENST00000459918 NBPF15Q8N660 670 aa10.49□□□□□ -0.73
HPS4-207ENST00000459918 RBM17Q96I25 401 aaKnown RBP10.49□□□□□ -0.73
HPS4-207ENST00000459918 RSPH6AQ9H0K4 717 aa10.49□□□□□ -0.73
HPS4-207ENST00000459918 RRP7AQ9Y3A4 280 aaKnown RBP10.49□□□□□ -0.73
HPS4-207ENST00000459918 COL4A5P29400 1685 aa10.49□□□□□ -0.73
HPS4-207ENST00000459918 DLG5Q8TDM6 1919 aa10.48□□□□□ -0.73
HPS4-207ENST00000459918 RGL2O15211 777 aa10.48□□□□□ -0.73
HPS4-207ENST00000459918 CELF2O95319 508 aaKnown RBP10.48□□□□□ -0.73
HPS4-207ENST00000459918 AOC3Q16853 763 aa10.48□□□□□ -0.73
HPS4-207ENST00000459918 BCL2L13Q9BXK5 485 aa10.48□□□□□ -0.73
HPS4-207ENST00000459918 ZBTB3Q9H5J0 574 aa10.48□□□□□ -0.73
HPS4-207ENST00000459918 TLL2Q9Y6L7 1015 aa10.48□□□□□ -0.73
HPS4-207ENST00000459918 CASP8AP2Q9UKL3 1982 aa10.48□□□□□ -0.73
HPS4-207ENST00000459918 KDM3BQ7LBC6 1761 aa10.47□□□□□ -0.73
HPS4-207ENST00000459918 CA12O43570 354 aa10.47□□□□□ -0.73
HPS4-207ENST00000459918 MAP2K2P36507 400 aa10.47□□□□□ -0.73
HPS4-207ENST00000459918 CRY2Q49AN0 593 aa10.47□□□□□ -0.73
HPS4-207ENST00000459918 ADARB2Q9NS39 739 aaKnown RBP10.47□□□□□ -0.73
HPS4-207ENST00000459918 MIS18AQ9NYP9 233 aa10.47□□□□□ -0.73
HPS4-207ENST00000459918 PER1O15534 1290 aaPredicted RBP10.46□□□□□ -0.73
HPS4-207ENST00000459918 DGKZQ13574 1117 aa10.46□□□□□ -0.73
HPS4-207ENST00000459918 TAF7Q15545 349 aaPredicted RBP10.46□□□□□ -0.73
HPS4-207ENST00000459918 CST9Q5W186 159 aa10.46□□□□□ -0.73
HPS4-207ENST00000459918 SUPT20HQ8NEM7 779 aa10.46□□□□□ -0.73
HPS4-207ENST00000459918 GPRC5DQ9NZD1 345 aa10.46□□□□□ -0.73
HPS4-207ENST00000459918 MAP3K15Q6ZN16 1313 aa10.46□□□□□ -0.73
HPS4-207ENST00000459918 ANKRD36CQ5JPF3 1778 aa10.45□□□□□ -0.74
HPS4-207ENST00000459918 RIC1Q4ADV7 1423 aa10.45□□□□□ -0.74
HPS4-207ENST00000459918 SNED1Q8TER0 1413 aa10.45□□□□□ -0.74
HPS4-207ENST00000459918 NPC1L1Q9UHC9 1359 aa10.45□□□□□ -0.74
HPS4-207ENST00000459918 ERVV-1B6SEH8 477 aa10.45□□□□□ -0.74
HPS4-207ENST00000459918 GMPSP49915 693 aaPredicted RBP10.45□□□□□ -0.74
HPS4-207ENST00000459918 DPP8Q6V1X1 898 aaPredicted RBP10.45□□□□□ -0.74
HPS4-207ENST00000459918 PPP1R42Q7Z4L9 355 aa10.45□□□□□ -0.74
HPS4-207ENST00000459918 NLRP3Q96P20 1036 aa10.45□□□□□ -0.74
HPS4-207ENST00000459918 GLIS2Q9BZE0 524 aaPredicted RBP10.45□□□□□ -0.74
HPS4-207ENST00000459918 MCOLN1Q9GZU1 580 aa10.45□□□□□ -0.74
HPS4-207ENST00000459918 LAMB2P55268 1798 aa10.44□□□□□ -0.74
HPS4-207ENST00000459918 IBTKQ9P2D0 1353 aaPredicted RBP10.44□□□□□ -0.74
HPS4-207ENST00000459918 UBN2Q6ZU65 1347 aa10.44□□□□□ -0.74
HPS4-207ENST00000459918 HOXA10P31260 410 aaPredicted RBP10.44□□□□□ -0.74
HPS4-207ENST00000459918 BRPF1P55201 1214 aaPredicted RBP10.44□□□□□ -0.74
HPS4-207ENST00000459918 SUSD4Q5VX71 490 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms